BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004182
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF26091.1|AC012393_17 low temperature and salt responsive pr...    62   4e-08
ref|XP_002884539.1| low temperature and salt responsive protein ...    62   4e-08
gb|AFC41201.1| PM-YC3.6-Lti6b [Binary expression vector PM-YC3.6...    62   6e-08
ref|NP_187240.1| Hydrophobic protein RCI2B [Arabidopsis thaliana...    62   6e-08
ref|NP_187239.1| Hydrophobic protein RCI2A [Arabidopsis thaliana...    61   8e-08

>gb|AAF26091.1|AC012393_17 low temperature and salt responsive protein LTI6B [Arabidopsis
           thaliana]
          Length = 67

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = +2

Query: 182 MSSATFLEIVLAIILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFWICLVL 361
           MS+ATF+EI+LAIILP                                   VEFWICL+L
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCK------------------------VEFWICLIL 36

Query: 362 TILGYLPGIIYAVYVITK*N 421
           T+ GYLPGI+YA+Y+ITK N
Sbjct: 37  TLFGYLPGILYALYIITKKN 56


>ref|XP_002884539.1| low temperature and salt responsive protein LTI6B [Arabidopsis
           lyrata subsp. lyrata] gi|297330379|gb|EFH60798.1| low
           temperature and salt responsive protein LTI6B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 67

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = +2

Query: 182 MSSATFLEIVLAIILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFWICLVL 361
           MS+ATF+EI+LAIILP                                   VEFWICL+L
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCK------------------------VEFWICLIL 36

Query: 362 TILGYLPGIIYAVYVITK*N 421
           T+ GYLPGI+YA+Y+ITK N
Sbjct: 37  TLFGYLPGILYALYIITKRN 56


>gb|AFC41201.1| PM-YC3.6-Lti6b [Binary expression vector PM-YC3.6-LTI6b]
          Length = 726

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/78 (43%), Positives = 42/78 (53%)
 Frame = +2

Query: 182 MSSATFLEIVLAIILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFWICLVL 361
           MS+ATF+EI+LAIILP                                   VEFWICL+L
Sbjct: 673 MSTATFVEIILAIILPPLGVFLKFGCK------------------------VEFWICLIL 708

Query: 362 TILGYLPGIIYAVYVITK 415
           T+ GYLPGI+YA+Y+ITK
Sbjct: 709 TLFGYLPGILYALYIITK 726


>ref|NP_187240.1| Hydrophobic protein RCI2B [Arabidopsis thaliana]
           gi|15214252|sp|Q9ZNS6.1|RCI2B_ARATH RecName:
           Full=Hydrophobic protein RCI2B; AltName: Full=Low
           temperature and salt-responsive protein LTI6B
           gi|6671968|gb|AAF23227.1|AC013454_14 low temperature and
           salt responsive protein (LTI6B) [Arabidopsis thaliana]
           gi|13957673|gb|AAK50618.1|AF264749_1 hydrophobic protein
           RCI2B [Arabidopsis thaliana] gi|4039152|gb|AAC97511.1|
           low temperature and salt responsive protein LTI6B
           [Arabidopsis thaliana] gi|4325219|gb|AAD17303.1|
           hydrophobic protein [Arabidopsis thaliana]
           gi|21536934|gb|AAM61275.1| hydrophobic protein RCI2B
           (Low temperature and salt responsive protein LTI6B)
           [Arabidopsis thaliana] gi|51970648|dbj|BAD44016.1| low
           temperature and salt responsive protein LTI6B
           [Arabidopsis thaliana] gi|109134195|gb|ABG25095.1|
           At3g05890 [Arabidopsis thaliana]
           gi|110737346|dbj|BAF00618.1| low temperature and salt
           responsive protein LTI6B [Arabidopsis thaliana]
           gi|332640791|gb|AEE74312.1| Hydrophobic protein RCI2B
           [Arabidopsis thaliana]
          Length = 54

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/78 (43%), Positives = 42/78 (53%)
 Frame = +2

Query: 182 MSSATFLEIVLAIILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFWICLVL 361
           MS+ATF+EI+LAIILP                                   VEFWICL+L
Sbjct: 1   MSTATFVEIILAIILPPLGVFLKFGCK------------------------VEFWICLIL 36

Query: 362 TILGYLPGIIYAVYVITK 415
           T+ GYLPGI+YA+Y+ITK
Sbjct: 37  TLFGYLPGILYALYIITK 54


>ref|NP_187239.1| Hydrophobic protein RCI2A [Arabidopsis thaliana]
           gi|15214251|sp|Q9ZNQ7.1|RCI2A_ARATH RecName:
           Full=Hydrophobic protein RCI2A; AltName: Full=Low
           temperature and salt-responsive protein LTI6A
           gi|6714401|gb|AAF26090.1|AC012393_16 low temperature and
           salt responsive protein LTI6A [Arabidopsis thaliana]
           gi|13957674|gb|AAK50619.1|AF264749_2 hydrophobic protein
           RCI2A [Arabidopsis thaliana] gi|4039153|gb|AAC97512.1|
           low temperature and salt responsive protein LTI6A
           [Arabidopsis thaliana] gi|4325217|gb|AAD17302.1|
           hydrophobic protein [Arabidopsis thaliana]
           gi|14335130|gb|AAK59845.1| AT3g05880/F10A16_18
           [Arabidopsis thaliana] gi|14532470|gb|AAK63963.1|
           AT3g05880/F10A16_18 [Arabidopsis thaliana]
           gi|18655345|gb|AAL76128.1| AT3g05880/F10A16_18
           [Arabidopsis thaliana] gi|332640790|gb|AEE74311.1|
           Hydrophobic protein RCI2A [Arabidopsis thaliana]
          Length = 54

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +2

Query: 182 MSSATFLEIVLAIILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFWICLVL 361
           MS+ATF++I++AI+LP                                   VEFWICLVL
Sbjct: 1   MSTATFVDIIIAILLPPLGVFLRFGCG------------------------VEFWICLVL 36

Query: 362 TILGYLPGIIYAVYVITK 415
           T+LGY+PGIIYA+YV+TK
Sbjct: 37  TLLGYIPGIIYAIYVLTK 54