BLASTX nr result

ID: Coptis23_contig00004176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004176
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165674.1| PREDICTED: uncharacterized protein LOC101230...    67   2e-09
ref|XP_004144689.1| PREDICTED: uncharacterized protein LOC101209...    67   2e-09
emb|CBI21559.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002331398.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|AEQ94158.1| Src homology 3 domain containing protein [Elaeis ...    60   2e-07

>ref|XP_004165674.1| PREDICTED: uncharacterized protein LOC101230432, partial [Cucumis
           sativus]
          Length = 892

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/67 (55%), Positives = 44/67 (65%)
 Frame = +3

Query: 291 QNASVQKDDARXXXXXXXXXXXXXXXXISSHFGGMSYPSLFSSKPSTYGAPQSSERSGAA 470
           + + +++DDAR                ISSHFGGMSYPSLFSS+PS YG  Q+SERSG  
Sbjct: 715 ETSELEEDDARSSGTSSPESTGSVETSISSHFGGMSYPSLFSSRPS-YGGTQTSERSG-- 771

Query: 471 ASRFSNP 491
           ASRFSNP
Sbjct: 772 ASRFSNP 778


>ref|XP_004144689.1| PREDICTED: uncharacterized protein LOC101209457 [Cucumis sativus]
          Length = 1262

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/67 (55%), Positives = 44/67 (65%)
 Frame = +3

Query: 291  QNASVQKDDARXXXXXXXXXXXXXXXXISSHFGGMSYPSLFSSKPSTYGAPQSSERSGAA 470
            + + +++DDAR                ISSHFGGMSYPSLFSS+PS YG  Q+SERSG  
Sbjct: 1085 ETSELEEDDARSSGTSSPESTGSVETSISSHFGGMSYPSLFSSRPS-YGGTQTSERSG-- 1141

Query: 471  ASRFSNP 491
            ASRFSNP
Sbjct: 1142 ASRFSNP 1148


>emb|CBI21559.3| unnamed protein product [Vitis vinifera]
          Length = 1214

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = +3

Query: 291  QNASVQKDDARXXXXXXXXXXXXXXXXISSHFGGMSYPSLFSSKPSTYGAPQSSERSGAA 470
            + + +++DDAR                ISSHFGGM+YPSLFSS+PS YG  QSSER   A
Sbjct: 1031 ETSEMEEDDARSSGTSSPESTGSVETSISSHFGGMNYPSLFSSRPSGYGTSQSSER--PA 1088

Query: 471  ASRFSN 488
            ASRFSN
Sbjct: 1089 ASRFSN 1094


>ref|XP_002331398.1| predicted protein [Populus trichocarpa] gi|222873612|gb|EEF10743.1|
           predicted protein [Populus trichocarpa]
          Length = 565

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/85 (41%), Positives = 48/85 (56%)
 Frame = +3

Query: 237 NDLKRESIKTDSGSSRPGQNASVQKDDARXXXXXXXXXXXXXXXXISSHFGGMSYPSLFS 416
           N + R S+  D   ++    +S  ++D R                ISSHFGGM+YPSLFS
Sbjct: 373 NIISRPSVSYDDMWAKTLLESSELEEDVRSSGSSSPDSIGSVETSISSHFGGMNYPSLFS 432

Query: 417 SKPSTYGAPQSSERSGAAASRFSNP 491
           S+P++YGA Q SERSG   +R+S P
Sbjct: 433 SRPTSYGASQISERSG--GNRYSGP 455


>gb|AEQ94158.1| Src homology 3 domain containing protein [Elaeis guineensis]
          Length = 354

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/62 (53%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +3

Query: 306 QKDDARXXXXXXXXXXXXXXXXISSHFGGMSYPSLFSSKPSTYGAPQSSE-RSGAAASRF 482
           ++DDAR                ISSHFGGMSYPSLFSS+PS YG  Q  E RS AA+SR 
Sbjct: 174 EEDDARSSGTSSPESTGSVESSISSHFGGMSYPSLFSSRPSGYGVSQQLEQRSAAASSRL 233

Query: 483 SN 488
            N
Sbjct: 234 GN 235


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