BLASTX nr result

ID: Coptis23_contig00004172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004172
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    92   2e-16
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    91   5e-16
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    89   2e-15
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    89   2e-15
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              83   1e-13

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
            gi|223533283|gb|EEF35036.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 437

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 51/179 (28%), Positives = 90/179 (50%)
 Frame = +2

Query: 602  ETWNVKVDTAQRQHKTCKWERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGR 781
            E W+  +       + C W++ + G   LN+DGS+   + G+  + RD  G  I A   +
Sbjct: 256  EKWSGLISPVTGSIRWCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSK 315

Query: 782  SNKHSIELIELNGVEQGLKMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSIN 961
            +    I L+EL  + +GL + +  GIK + V++DS + +        H  +A + +  I 
Sbjct: 316  APLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIW 375

Query: 962  QLKEQLEDFSITHVYREANKLADALASNIPTVSYIELIPSSFTEDEKKIIYDDAIGKEY 1138
             L ++ E++ ++H +RE NK AD L+  +   + + L P  F    + II DDA G+ Y
Sbjct: 376  ALLKKFEEYKVSHAWRETNKAADYLSKMVLERNDVVLWPVHFPTTLQNIIKDDAQGRIY 434


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 52/179 (29%), Positives = 92/179 (51%)
 Frame = +2

Query: 602  ETWNVKVDTAQRQHKTCKWERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGR 781
            ETW+  +    R  + C+W+R + G   LN+DGS+   N G   + RD  G  I     +
Sbjct: 149  ETWSDLLGPVARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSK 208

Query: 782  SNKHSIELIELNGVEQGLKMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSIN 961
            ++ H I L+EL  + +GL + +   I+ + V++DS +V++    +  +  +A+  ++ I 
Sbjct: 209  ASGHDIFLVELWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIR 268

Query: 962  QLKEQLEDFSITHVYREANKLADALASNIPTVSYIELIPSSFTEDEKKIIYDDAIGKEY 1138
             L ++ +   ++H +RE N+ AD LA  +     + L P+ F      II DDA G  Y
Sbjct: 269  LLLKKFKKHKVSHSWRETNRAADYLAKMVVERDVV-LWPADFPTSLNNIIKDDAEGMVY 326


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 52/161 (32%), Positives = 86/161 (53%)
 Frame = +2

Query: 656  WERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGRSNKHSIELIELNGVEQGL 835
            WE+ E G + LN+DGS+   N G+  + RD NG  I A   +++++ I L+EL  + +GL
Sbjct: 268  WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 836  KMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSINQLKEQLEDFSITHVYREA 1015
             +    GIK + V++DS + +     K  +  +A   +  I  L E+ E + ++H +RE 
Sbjct: 328  VLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRET 387

Query: 1016 NKLADALASNIPTVSYIELIPSSFTEDEKKIIYDDAIGKEY 1138
            NK AD L+    + + + L  + F      II DDA G+ Y
Sbjct: 388  NKAADFLSKMDLSGNDVVLGTADFPNGLNSIIKDDAEGRMY 428


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 53/161 (32%), Positives = 86/161 (53%)
 Frame = +2

Query: 656  WERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGRSNKHSIELIELNGVEQGL 835
            WE+ E G + LN+DGS+   N G+  + RD NG  I A   +++++ I L+EL  + +GL
Sbjct: 155  WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 836  KMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSINQLKEQLEDFSITHVYREA 1015
             +    GIK + V++DS +V+     K  +  +A   +  I  L  + E + ++H +RE 
Sbjct: 215  VLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRET 274

Query: 1016 NKLADALASNIPTVSYIELIPSSFTEDEKKIIYDDAIGKEY 1138
            NK AD L+    + S + L  + F      II DDA G+ Y
Sbjct: 275  NKAADFLSRMDLSGSDVVLGTADFPNGLNSIIKDDAEGRMY 315


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 9/307 (2%)
 Frame = +2

Query: 236  CVYCWREVETEEHLLHECSFSKAVWYTVLGKMGYHRTM---ANSWQEEIDWVRRVTAGKG 406
            C  C  E ET +HL   C  ++A W + +  + +  +     +SW +         A   
Sbjct: 1078 CPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMK--------AACSS 1129

Query: 407  PKQDATRLVWNA---YNYW-IWKTRNERIFENKQTYADGVAERILRDVRIKIQTMEIKMP 574
             ++D     W+    Y  W +WK RN  +F+N  T    +  R      ++       + 
Sbjct: 1130 QQKDGYSTNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSF----MESSEARCLLA 1185

Query: 575  EGPEKQHFQETWNVKVDTAQRQHKTCKWERAENGISNLNSDGSLQGMN--GGWAAVARDG 748
            +    Q   +TW V             W     G + LNSDG+ +  +       + R+ 
Sbjct: 1186 KRTGLQTAFQTWVV-------------WSPPAAGFTKLNSDGACKSHSHLASAGGLLRNE 1232

Query: 749  NGQVIVASKGRSNKHSIELIELNGVEQGLKMVVRHGIKKVRVQTDSSTVISFFRNKGQHP 928
            NG  +          +  L EL G+ +GL +    G  K+  +TDS  V+   R  G   
Sbjct: 1233 NGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVT 1292

Query: 929  WQAEKMMRSINQLKEQLEDFSITHVYREANKLADALASNIPTVSYIELIPSSFTEDEKKI 1108
              A  +++    L +  ++  +TH+ RE N+ AD LA+   + S+   I     +D +  
Sbjct: 1293 PDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERPPDDLRIF 1352

Query: 1109 IYDDAIG 1129
            +  DAIG
Sbjct: 1353 LQRDAIG 1359


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