BLASTX nr result

ID: Coptis23_contig00004160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004160
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276644.1| PREDICTED: putative germin-like protein 2-1 ...   173   2e-41
ref|XP_002276756.2| PREDICTED: putative germin-like protein 2-1-...   172   5e-41
ref|XP_002276315.1| PREDICTED: putative germin-like protein 2-1 ...   171   6e-41
ref|XP_003633711.1| PREDICTED: putative germin-like protein 2-1-...   170   1e-40
ref|XP_003633724.1| PREDICTED: putative germin-like protein 2-1-...   170   1e-40

>ref|XP_002276644.1| PREDICTED: putative germin-like protein 2-1 [Vitis vinifera]
          Length = 228

 Score =  173 bits (439), Expect = 2e-41
 Identities = 79/94 (84%), Positives = 84/94 (89%)
 Frame = +2

Query: 2   PSSLQDFCIGINDPKDGVFVNGKFCKDAKLATANDFFFSGLRKPGNTSNQLGSMVTPANV 181
           PS LQDFC+ +ND  D VFVNGKFCKD KLAT NDFFFSGLR PGNTSN+LGSMVTPANV
Sbjct: 27  PSPLQDFCVAVNDTNDSVFVNGKFCKDPKLATPNDFFFSGLRVPGNTSNKLGSMVTPANV 86

Query: 182 DQIPGLNTLGISLVRIDYAPYGLNPPHTHPRATE 283
            QIPGLNTLG+SL R+DYAPYGLNPPHTHPRATE
Sbjct: 87  AQIPGLNTLGVSLARVDYAPYGLNPPHTHPRATE 120



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = +1

Query: 394 AFAGLSSQNPGVIPIAKSVFGSNPPISDDVLAKAFQIDKKMVDYLQAQFWTNN 552
           A A LSSQNPGVI IA +VFGS P IS DVL KAFQ+DK +++YLQ+QFWT+N
Sbjct: 173 AIASLSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKNVINYLQSQFWTDN 225


>ref|XP_002276756.2| PREDICTED: putative germin-like protein 2-1-like [Vitis vinifera]
          Length = 228

 Score =  172 bits (435), Expect = 5e-41
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = +2

Query: 2   PSSLQDFCIGINDPKDGVFVNGKFCKDAKLATANDFFFSGLRKPGNTSNQLGSMVTPANV 181
           PS LQDFC+ +ND  D VFVNGKFCKD KLAT NDFFFSGLR PGNTSN+LGSMVTPANV
Sbjct: 27  PSPLQDFCVAVNDTNDSVFVNGKFCKDPKLATPNDFFFSGLRVPGNTSNKLGSMVTPANV 86

Query: 182 DQIPGLNTLGISLVRIDYAPYGLNPPHTHPRATE 283
            QIPGLNTLG+SL R+DYAPYGLNPPH+HPRATE
Sbjct: 87  AQIPGLNTLGVSLARVDYAPYGLNPPHSHPRATE 120



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = +1

Query: 394 AFAGLSSQNPGVIPIAKSVFGSNPPISDDVLAKAFQIDKKMVDYLQAQFWTNN 552
           A A LSSQNPGVI IA +VFGS P IS DVL KAFQ+DK +V+YLQ+QFWT+N
Sbjct: 173 AIASLSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKNVVNYLQSQFWTDN 225


>ref|XP_002276315.1| PREDICTED: putative germin-like protein 2-1 [Vitis vinifera]
          Length = 225

 Score =  171 bits (434), Expect = 6e-41
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = +2

Query: 2   PSSLQDFCIGINDPKDGVFVNGKFCKDAKLATANDFFFSGLRKPGNTSNQLGSMVTPANV 181
           PS LQDFC+ +ND  D VFVNGKFC+D KLAT NDFFFSGLR PGNTSN+LGSMVTPANV
Sbjct: 24  PSPLQDFCVAVNDTNDTVFVNGKFCRDPKLATPNDFFFSGLRVPGNTSNKLGSMVTPANV 83

Query: 182 DQIPGLNTLGISLVRIDYAPYGLNPPHTHPRATE 283
            QIPGLNTLG+SL R+DYAPYGLNPPHTHPRATE
Sbjct: 84  AQIPGLNTLGVSLARVDYAPYGLNPPHTHPRATE 117



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +1

Query: 394 AFAGLSSQNPGVIPIAKSVFGSNPPISDDVLAKAFQIDKKMVDYLQAQFWTNN 552
           A A LSSQNPGVI IA +VFGS P IS DVL KAFQ+DK  V+YLQ+QFWT+N
Sbjct: 170 AIASLSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKNEVNYLQSQFWTDN 222


>ref|XP_003633711.1| PREDICTED: putative germin-like protein 2-1-like [Vitis vinifera]
          Length = 234

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/94 (84%), Positives = 84/94 (89%)
 Frame = +2

Query: 2   PSSLQDFCIGINDPKDGVFVNGKFCKDAKLATANDFFFSGLRKPGNTSNQLGSMVTPANV 181
           PS LQDFC+ +ND K  VFVNGK CKD K+ATANDFFFSGLR PGNTSN+LGSMVTPANV
Sbjct: 40  PSPLQDFCVAVNDTKTTVFVNGKVCKDPKVATANDFFFSGLRVPGNTSNKLGSMVTPANV 99

Query: 182 DQIPGLNTLGISLVRIDYAPYGLNPPHTHPRATE 283
            QIPGLNTLGISL R+DYAPYGLNPPHTHPRATE
Sbjct: 100 AQIPGLNTLGISLARVDYAPYGLNPPHTHPRATE 133



 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 37/49 (75%), Positives = 41/49 (83%)
 Frame = +1

Query: 394 AFAGLSSQNPGVIPIAKSVFGSNPPISDDVLAKAFQIDKKMVDYLQAQF 540
           A A LSSQNPGVI IA +VFGS P IS DVL KAFQ+DKK+VDYLQ+QF
Sbjct: 186 AIAALSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKKVVDYLQSQF 234


>ref|XP_003633724.1| PREDICTED: putative germin-like protein 2-1-like [Vitis vinifera]
          Length = 221

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/94 (84%), Positives = 84/94 (89%)
 Frame = +2

Query: 2   PSSLQDFCIGINDPKDGVFVNGKFCKDAKLATANDFFFSGLRKPGNTSNQLGSMVTPANV 181
           PS LQDFC+ +ND K  VFVNGK CKD K+ATANDFFFSGLR PGNTSN+LGSMVTPANV
Sbjct: 27  PSPLQDFCVAVNDTKTTVFVNGKVCKDPKVATANDFFFSGLRVPGNTSNKLGSMVTPANV 86

Query: 182 DQIPGLNTLGISLVRIDYAPYGLNPPHTHPRATE 283
            QIPGLNTLGISL R+DYAPYGLNPPHTHPRATE
Sbjct: 87  AQIPGLNTLGISLARVDYAPYGLNPPHTHPRATE 120



 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 37/49 (75%), Positives = 41/49 (83%)
 Frame = +1

Query: 394 AFAGLSSQNPGVIPIAKSVFGSNPPISDDVLAKAFQIDKKMVDYLQAQF 540
           A A LSSQNPGVI IA +VFGS P IS DVL KAFQ+DKK+VDYLQ+QF
Sbjct: 173 AIAALSSQNPGVITIANAVFGSKPAISADVLTKAFQVDKKVVDYLQSQF 221


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