BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004139
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   194   8e-48
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   187   6e-46
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/133 (69%), Positives = 110/133 (82%)
 Frame = +2

Query: 71  EDLEFCFQQLVVFXXXXXXXXXXXXXVMTDWKDLPMELLLRIVSLVDDRTVITASGVCTG 250
           E+LEFCF++LV+              V+T+WKD+PMELLLRIV+LVDDRTVI ASGVC+G
Sbjct: 9   EELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVIMASGVCSG 68

Query: 251 WRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVANFCH 430
           WRDA+CLGLTHL LSWCKN+MNNL+LSLAPKFTKLQ L+LRQ K QL+D A+E +AN+CH
Sbjct: 69  WRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYCH 128

Query: 431 DLQDLDLSLSNKL 469
           DLQDLDLS S KL
Sbjct: 129 DLQDLDLSKSFKL 141


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/133 (69%), Positives = 110/133 (82%)
 Frame = +2

Query: 71  EDLEFCFQQLVVFXXXXXXXXXXXXXVMTDWKDLPMELLLRIVSLVDDRTVITASGVCTG 250
           E+LEFCF++LV+              V+T+WKD+PMELLLRIV+LVDDRTVI ASGVC+G
Sbjct: 67  EELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVIMASGVCSG 126

Query: 251 WRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVANFCH 430
           WRDA+CLGLTHL LSWCKN+MNNL+LSLAPKFTKLQ L+LRQ K QL+D A+E +AN+CH
Sbjct: 127 WRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYCH 186

Query: 431 DLQDLDLSLSNKL 469
           DLQDLDLS S KL
Sbjct: 187 DLQDLDLSKSFKL 199


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/135 (68%), Positives = 110/135 (81%)
 Frame = +2

Query: 65  RSEDLEFCFQQLVVFXXXXXXXXXXXXXVMTDWKDLPMELLLRIVSLVDDRTVITASGVC 244
           RSEDL  CF++L++              V+T+WKD+P+ELLLRIVSLVDDRTVI ASGVC
Sbjct: 8   RSEDLNLCFEKLMMLAFGGA--------VITEWKDIPVELLLRIVSLVDDRTVIMASGVC 59

Query: 245 TGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVANF 424
           +GWRDA+C+GLTHLCLSWCKN+MNNL+LSLAPKFTKLQ L LRQ K QL+D A+E +A++
Sbjct: 60  SGWRDAICMGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHAVETIASY 119

Query: 425 CHDLQDLDLSLSNKL 469
           CHDLQDLDLS S KL
Sbjct: 120 CHDLQDLDLSKSFKL 134


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/138 (66%), Positives = 110/138 (79%), Gaps = 2/138 (1%)
 Frame = +2

Query: 62  LRSEDLEFCFQQLVVFXXXXXXXXXXXXX--VMTDWKDLPMELLLRIVSLVDDRTVITAS 235
           LRSEDL  CF++L++                V+T+WKD+PMELLLRIVSLVDDRT+I AS
Sbjct: 7   LRSEDLNRCFEKLMMAGAAGNTEGRVKMEGVVITEWKDIPMELLLRIVSLVDDRTIIMAS 66

Query: 236 GVCTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAV 415
           GVC+GWRDA+CLGLTHLCLSWCKN MNNL+L LAPKFTKL+ L LRQ K QL+D+A+EA+
Sbjct: 67  GVCSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLEDNAVEAI 126

Query: 416 ANFCHDLQDLDLSLSNKL 469
           A +CHDL+DLDLS S KL
Sbjct: 127 ARYCHDLEDLDLSKSFKL 144


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/107 (77%), Positives = 98/107 (91%)
 Frame = +2

Query: 149 VMTDWKDLPMELLLRIVSLVDDRTVITASGVCTGWRDAVCLGLTHLCLSWCKNSMNNLLL 328
           V+T+WKD+PM+LLLRIVSLVDDRT+I ASGVC+GWRDA+C GLTHLCLSWCKN+MNNL+L
Sbjct: 23  VITEWKDIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNLVL 82

Query: 329 SLAPKFTKLQVLSLRQVKAQLQDDAIEAVANFCHDLQDLDLSLSNKL 469
           SLAPKFTKLQ L LRQ K QL+D+A+E +A++CHDLQDLDLS S KL
Sbjct: 83  SLAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDLSKSFKL 129