BLASTX nr result

ID: Coptis23_contig00004126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004126
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325380.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|NP_001236010.1| uncharacterized protein LOC100500297 [Glycin...    68   1e-09
ref|XP_002319877.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|AFK37073.1| unknown [Lotus japonicus]                               65   9e-09
ref|NP_001236027.1| uncharacterized protein LOC100500554 [Glycin...    64   3e-08

>ref|XP_002325380.1| predicted protein [Populus trichocarpa] gi|222862255|gb|EEE99761.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = -2

Query: 520 MTKFNVIQKKRRAQIAESKRKIHGDPLTGKLKTRPQTHTLSG 395
           M KFNV+QK RRAQIAESKR IHGDPLT KLK RPQ H++SG
Sbjct: 1   MAKFNVLQKIRRAQIAESKRAIHGDPLTKKLKIRPQPHSVSG 42


>ref|NP_001236010.1| uncharacterized protein LOC100500297 [Glycine max]
           gi|255629964|gb|ACU15334.1| unknown [Glycine max]
          Length = 125

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/88 (48%), Positives = 49/88 (55%)
 Frame = -2

Query: 520 MTKFNVIQKKRRAQIAESKRKIHGDPLTGKLKTRPQTHTLSGXXXXXXXXXXXRDNKQDA 341
           M KFNV+QKKRRA IAE KR++HGDPLTGKLK + Q  +LSG           RD K   
Sbjct: 1   MAKFNVVQKKRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 340 LLLSTAMEHDALAPADPTLPEGTTTKAP 257
                AME   +A A     EG T  AP
Sbjct: 61  QNGLVAMEDVQMAVA-----EGDTKDAP 83


>ref|XP_002319877.1| predicted protein [Populus trichocarpa] gi|222858253|gb|EEE95800.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = -2

Query: 520 MTKFNVIQKKRRAQIAESKRKIHGDPLTGKLKTRPQTHTLSGXXXXXXXXXXXRDNKQ-- 347
           M KFNV+QK+RRAQIAESKR IHGDPLT KLK + Q  TLSG           R+ K+  
Sbjct: 1   MAKFNVVQKRRRAQIAESKRAIHGDPLTKKLKNKTQPLTLSGKRKRKLLKKWRREQKEAV 60

Query: 346 DALLLSTAMEHDALAPADPTLPEGTTT 266
           D  L++      A AP + T  +   T
Sbjct: 61  DKGLVTMQDVEMAFAPGEVTTKDAKRT 87


>gb|AFK37073.1| unknown [Lotus japonicus]
          Length = 125

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 41/88 (46%), Positives = 46/88 (52%)
 Frame = -2

Query: 520 MTKFNVIQKKRRAQIAESKRKIHGDPLTGKLKTRPQTHTLSGXXXXXXXXXXXRDNKQDA 341
           M KFNV+QK RRA  AE KRKIHGDP TGKLK R Q  +LSG           R+ K+  
Sbjct: 1   MAKFNVVQKARRAAAAEKKRKIHGDPTTGKLKVRTQPQSLSGKRKRKLFNYWRREQKEAL 60

Query: 340 LLLSTAMEHDALAPADPTLPEGTTTKAP 257
                 ME   +A A     EG T  AP
Sbjct: 61  QNGVVTMEDVQMAVA-----EGATKDAP 83


>ref|NP_001236027.1| uncharacterized protein LOC100500554 [Glycine max]
           gi|255630617|gb|ACU15668.1| unknown [Glycine max]
          Length = 125

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/88 (43%), Positives = 48/88 (54%)
 Frame = -2

Query: 520 MTKFNVIQKKRRAQIAESKRKIHGDPLTGKLKTRPQTHTLSGXXXXXXXXXXXRDNKQDA 341
           M KFNV+QK+RRA IAE KR++HGDPLTGKLK + Q  +LSG           RD K   
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 340 LLLSTAMEHDALAPADPTLPEGTTTKAP 257
                 ME   +A A+    + T   +P
Sbjct: 61  QNGLVTMEDVQMAVAEAGDTKDTPRPSP 88


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