BLASTX nr result

ID: Coptis23_contig00004121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004121
         (2607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20493.3| unnamed protein product [Vitis vinifera]              653   0.0  
ref|XP_002280117.1| PREDICTED: formin-like protein 5-like [Vitis...   653   0.0  
ref|XP_002317562.1| predicted protein [Populus trichocarpa] gi|2...   645   0.0  
ref|XP_002319800.1| predicted protein [Populus trichocarpa] gi|2...   630   e-178
ref|XP_002522822.1| actin binding protein, putative [Ricinus com...   627   e-177

>emb|CBI20493.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  653 bits (1685), Expect = 0.0
 Identities = 338/454 (74%), Positives = 387/454 (85%), Gaps = 8/454 (1%)
 Frame = +3

Query: 870  PKTKLKPFFWDKVLANPDQSMVWHQIKSGSFQFNEEMIETLFGYNNADKAKAERKKDVLS 1049
            PKTKLKPFFWDKVLANPD SMVWHQIKSGSFQF+EEMIETLFGY   +K K  RK+   +
Sbjct: 39   PKTKLKPFFWDKVLANPDHSMVWHQIKSGSFQFSEEMIETLFGYAPPEKNKTVRKESS-A 97

Query: 1050 QDPSTQYIQIIDSKKAQNLSILLRALNLTTEEVCDALYEGNELPVELCQTLLKMAPTAEE 1229
            QD S+QYIQ+IDSKK+QNL+ILLRALN+TTEE CDA+ EGNELPVEL QTLLKMAPTAEE
Sbjct: 98   QDSSSQYIQLIDSKKSQNLAILLRALNVTTEEFCDAIQEGNELPVELLQTLLKMAPTAEE 157

Query: 1230 ELKLRLYSGELSQLGPAERFLKILVDIPFAFRRLDSLCFMSSYQEEVSSVKESLATLEVA 1409
            ELKLRL+SG LSQLGPAERFLK+LVDIPFAF+RL+SL FM S QE++S +KES ATLE A
Sbjct: 158  ELKLRLFSGNLSQLGPAERFLKVLVDIPFAFKRLESLLFMGSLQEDISMLKESFATLEAA 217

Query: 1410 CKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGIDGKTTLLNFV 1589
            CKEL++SRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKG+DGKTTLL+FV
Sbjct: 218  CKELKSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFV 277

Query: 1590 VLEIIRSEGIRAARAARESQSLSSVKSDDLFEDSLHETEEHYGSLGLQVVSSLGGELENV 1769
            VLEIIRSEG+RA RAARES+SLSS+KSDDL ED   ++EEHY SLGLQVVS L  ELENV
Sbjct: 278  VLEIIRSEGVRAVRAARESRSLSSIKSDDLLEDPSQDSEEHYRSLGLQVVSGLSDELENV 337

Query: 1770 KKASAQDADGLSGTVAKLENALSKSREFLNSEMKSLEEDSGFHRILQSFVQNAEVDIKWL 1949
            +KAS  D DGL  TVAK+ N L K+R FLNS+M++++  +GF + L+SFVQ+AEVDI WL
Sbjct: 338  RKASVLDTDGLKETVAKVGNELLKTRNFLNSDMRNIDNKNGFCQTLESFVQHAEVDITWL 397

Query: 1950 LEEEKRIMSLVRSTADYFHGNAKKDEGLRLFVIVRNFLIMLDKTCKEVKESTVKAARIPR 2129
            LEEEKRI +LV+ST DYFHGNA KDEGLRLFVIVR+FLIMLDK CK+V+++  K    P+
Sbjct: 398  LEEEKRITALVKSTIDYFHGNAGKDEGLRLFVIVRDFLIMLDKACKQVRDAPKKPR--PQ 455

Query: 2130 NKESPSV--------PPSPDLHQRLFPAIVDRRM 2207
             KE P+         P SPD+ Q+LFPAIVDRRM
Sbjct: 456  KKEVPTAQPSSDTRQPASPDIRQKLFPAIVDRRM 489


>ref|XP_002280117.1| PREDICTED: formin-like protein 5-like [Vitis vinifera]
          Length = 1004

 Score =  653 bits (1685), Expect = 0.0
 Identities = 338/454 (74%), Positives = 387/454 (85%), Gaps = 8/454 (1%)
 Frame = +3

Query: 870  PKTKLKPFFWDKVLANPDQSMVWHQIKSGSFQFNEEMIETLFGYNNADKAKAERKKDVLS 1049
            PKTKLKPFFWDKVLANPD SMVWHQIKSGSFQF+EEMIETLFGY   +K K  RK+   +
Sbjct: 544  PKTKLKPFFWDKVLANPDHSMVWHQIKSGSFQFSEEMIETLFGYAPPEKNKTVRKESS-A 602

Query: 1050 QDPSTQYIQIIDSKKAQNLSILLRALNLTTEEVCDALYEGNELPVELCQTLLKMAPTAEE 1229
            QD S+QYIQ+IDSKK+QNL+ILLRALN+TTEE CDA+ EGNELPVEL QTLLKMAPTAEE
Sbjct: 603  QDSSSQYIQLIDSKKSQNLAILLRALNVTTEEFCDAIQEGNELPVELLQTLLKMAPTAEE 662

Query: 1230 ELKLRLYSGELSQLGPAERFLKILVDIPFAFRRLDSLCFMSSYQEEVSSVKESLATLEVA 1409
            ELKLRL+SG LSQLGPAERFLK+LVDIPFAF+RL+SL FM S QE++S +KES ATLE A
Sbjct: 663  ELKLRLFSGNLSQLGPAERFLKVLVDIPFAFKRLESLLFMGSLQEDISMLKESFATLEAA 722

Query: 1410 CKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGIDGKTTLLNFV 1589
            CKEL++SRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKG+DGKTTLL+FV
Sbjct: 723  CKELKSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFV 782

Query: 1590 VLEIIRSEGIRAARAARESQSLSSVKSDDLFEDSLHETEEHYGSLGLQVVSSLGGELENV 1769
            VLEIIRSEG+RA RAARES+SLSS+KSDDL ED   ++EEHY SLGLQVVS L  ELENV
Sbjct: 783  VLEIIRSEGVRAVRAARESRSLSSIKSDDLLEDPSQDSEEHYRSLGLQVVSGLSDELENV 842

Query: 1770 KKASAQDADGLSGTVAKLENALSKSREFLNSEMKSLEEDSGFHRILQSFVQNAEVDIKWL 1949
            +KAS  D DGL  TVAK+ N L K+R FLNS+M++++  +GF + L+SFVQ+AEVDI WL
Sbjct: 843  RKASVLDTDGLKETVAKVGNELLKTRNFLNSDMRNIDNKNGFCQTLESFVQHAEVDITWL 902

Query: 1950 LEEEKRIMSLVRSTADYFHGNAKKDEGLRLFVIVRNFLIMLDKTCKEVKESTVKAARIPR 2129
            LEEEKRI +LV+ST DYFHGNA KDEGLRLFVIVR+FLIMLDK CK+V+++  K    P+
Sbjct: 903  LEEEKRITALVKSTIDYFHGNAGKDEGLRLFVIVRDFLIMLDKACKQVRDAPKKPR--PQ 960

Query: 2130 NKESPSV--------PPSPDLHQRLFPAIVDRRM 2207
             KE P+         P SPD+ Q+LFPAIVDRRM
Sbjct: 961  KKEVPTAQPSSDTRQPASPDIRQKLFPAIVDRRM 994


>ref|XP_002317562.1| predicted protein [Populus trichocarpa] gi|222860627|gb|EEE98174.1|
            predicted protein [Populus trichocarpa]
          Length = 983

 Score =  645 bits (1663), Expect = 0.0
 Identities = 348/482 (72%), Positives = 393/482 (81%), Gaps = 15/482 (3%)
 Frame = +3

Query: 807  PLGQNRTGNTXXXXXXXXXXX-----PKTKLKPFFWDKVLANPDQSMVWHQIKSGSFQFN 971
            PLG  R  N+                PKTKLKPFFWDKVLANPD SMVWHQIKSGSFQFN
Sbjct: 493  PLGSKRPSNSASSEGAGLGDDADADAPKTKLKPFFWDKVLANPDHSMVWHQIKSGSFQFN 552

Query: 972  EEMIETLFGYNNADKAKAERKKDVLSQDPSTQYIQIIDSKKAQNLSILLRALNLTTEEVC 1151
            EEMIETLFGY   DK K E KK+  SQDPS QYIQI+D KKAQNLSILLRALN+T EEVC
Sbjct: 553  EEMIETLFGYA-PDKNKNEHKKESSSQDPSPQYIQILDPKKAQNLSILLRALNVTIEEVC 611

Query: 1152 DALYEGNELPVELCQTLLKMAPTAEEELKLRLYSGELSQLGPAERFLKILVDIPFAFRRL 1331
            DAL EGNELPVEL Q LL+MAPTA+EELKLRLYSGELSQLGPAERFLK LVDIPFAF+RL
Sbjct: 612  DALREGNELPVELLQNLLRMAPTADEELKLRLYSGELSQLGPAERFLKALVDIPFAFKRL 671

Query: 1332 DSLCFMSSYQEEVSSVKESLATLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQ 1511
            ++L FM   QEEV++ KES  TLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQ
Sbjct: 672  EALLFMCILQEEVATTKESFETLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQ 731

Query: 1512 AFKLDTLLKLADVKGIDGKTTLLNFVVLEIIRSEGIRAARAARESQSLS--SVKSDDLFE 1685
            AFKLDTLLKL+DVKGIDGKTTLL+FVV EIIRSEG+RAARA RES+S+S  SVK+DDL E
Sbjct: 732  AFKLDTLLKLSDVKGIDGKTTLLHFVVQEIIRSEGVRAARAGRESRSISSVSVKTDDLLE 791

Query: 1686 DSLHETEEHYGSLGLQVVSSLGGELENVKKASAQDADGLSGTVAKLENALSKSREFLNSE 1865
            D   +TE++Y SLGLQVVS L  ELENVK+A+  DAD L+G+VAKL  ++  +R FLN +
Sbjct: 792  DISPDTEDNYSSLGLQVVSQLSSELENVKRAAVVDADSLTGSVAKLGQSVVVTRNFLNKD 851

Query: 1866 MKSLEEDSGFHRILQSFVQNAEVDIKWLLEEEKRIMSLVRSTADYFHGNAKKDEGLRLFV 2045
            MK+LEE+SGFH  L+SFVQNAEVDI  LLEEEKRI++LV+ST DYF+GNA KDEGLRLF+
Sbjct: 852  MKNLEENSGFHETLKSFVQNAEVDIMSLLEEEKRIVALVKSTGDYFYGNAGKDEGLRLFI 911

Query: 2046 IVRNFLIMLDKTCKEVKESTVKAARIPRNKE-----SPS---VPPSPDLHQRLFPAIVDR 2201
            +VR+FLI+LDK CKEV E+  ++A+  R KE     SPS     PSPD+ QRLFPAI +R
Sbjct: 912  VVRDFLIILDKVCKEVGEAQKRSAK-TRKKEASTASSPSHKHQQPSPDIRQRLFPAIAER 970

Query: 2202 RM 2207
            RM
Sbjct: 971  RM 972


>ref|XP_002319800.1| predicted protein [Populus trichocarpa] gi|222858176|gb|EEE95723.1|
            predicted protein [Populus trichocarpa]
          Length = 923

 Score =  630 bits (1624), Expect = e-178
 Identities = 340/484 (70%), Positives = 386/484 (79%), Gaps = 12/484 (2%)
 Frame = +3

Query: 789  KVAHPSPLGQNRTGNTXXXXXXXXXXX---PKTKLKPFFWDKVLANPDQSMVWHQIKSGS 959
            KV  P PLG     NT              PK KLKPFFWDKVLANPD SMVWHQIKSGS
Sbjct: 434  KVPRP-PLGSKHPSNTASSEGAGMEDDADAPKAKLKPFFWDKVLANPDHSMVWHQIKSGS 492

Query: 960  FQFNEEMIETLFGYNNADKAKAERKKDVLSQDPSTQYIQIIDSKKAQNLSILLRALNLTT 1139
            FQFNEEMIETLFGY   DK K ERKK+  SQDP+  +IQI+D KKAQNLSILLRALN+T 
Sbjct: 493  FQFNEEMIETLFGYA-PDKNKNERKKES-SQDPTPHFIQILDPKKAQNLSILLRALNVTI 550

Query: 1140 EEVCDALYEGNELPVELCQTLLKMAPTAEEELKLRLYSGELSQLGPAERFLKILVDIPFA 1319
            EEVCDAL EGNELPVEL Q LL+MAPTA+EELKLRLYSGELSQLGPAERFLK LVDIPFA
Sbjct: 551  EEVCDALREGNELPVELVQNLLRMAPTADEELKLRLYSGELSQLGPAERFLKALVDIPFA 610

Query: 1320 FRRLDSLCFMSSYQEEVSSVKESLATLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFR 1499
            F+RL++L  M + QEE++S KES  TLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFR
Sbjct: 611  FKRLEALLLMCTLQEEITSSKESFETLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFR 670

Query: 1500 GGAQAFKLDTLLKLADVKGIDGKTTLLNFVVLEIIRSEGIRAARAARESQSLSSV--KSD 1673
            GGAQAFKLDTLLKL+DVKG+DGKTTLL+FVV EI+RSEG+RAARA RES+SLSSV  K+D
Sbjct: 671  GGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIVRSEGVRAARAGRESRSLSSVSIKTD 730

Query: 1674 DLFEDSLHETEEHYGSLGLQVVSSLGGELENVKKASAQDADGLSGTVAKLENALSKSREF 1853
            DL E+   +TEEHY +LGLQVVS L  ELENVK+A+  D D L+ + AKL  +L  ++ F
Sbjct: 731  DLLEEISTDTEEHYCNLGLQVVSHLSSELENVKRAAVVDTDNLTRSAAKLGQSLLVTQNF 790

Query: 1854 LNSEMKSLEEDSGFHRILQSFVQNAEVDIKWLLEEEKRIMSLVRSTADYFHGNAKKDEGL 2033
            LN +MK+LEEDSGFH+ L+ FVQNAEVD+  LLEEEKRIM+LV+ST DYFHGNA KDEGL
Sbjct: 791  LNKDMKNLEEDSGFHQTLKGFVQNAEVDVMSLLEEEKRIMALVKSTGDYFHGNAGKDEGL 850

Query: 2034 RLFVIVRNFLIMLDKTCKEVKESTVKAARIPRNKESPSVPPS-------PDLHQRLFPAI 2192
            RLFVIVR+FLI+LDK CKEV+E+  + A+  + + S    PS        DL QRLFPAI
Sbjct: 851  RLFVIVRDFLIILDKVCKEVREAQKRLAKTQKKEASTVSSPSNQRQQLLADLRQRLFPAI 910

Query: 2193 VDRR 2204
             +RR
Sbjct: 911  AERR 914


>ref|XP_002522822.1| actin binding protein, putative [Ricinus communis]
            gi|223537906|gb|EEF39520.1| actin binding protein,
            putative [Ricinus communis]
          Length = 965

 Score =  627 bits (1616), Expect = e-177
 Identities = 330/454 (72%), Positives = 379/454 (83%), Gaps = 9/454 (1%)
 Frame = +3

Query: 870  PKTKLKPFFWDKVLANPDQSMVWHQIKSGSFQFNEEMIETLFGYNNADKAKAERKKDVLS 1049
            PK KLKPFFWDKV+ANP+ SMVWHQIKSGSFQFNEEMIETLFGY   D+ K E KK+  S
Sbjct: 503  PKAKLKPFFWDKVMANPEHSMVWHQIKSGSFQFNEEMIETLFGYAAVDRNKNEGKKESSS 562

Query: 1050 QDPSTQYIQIIDSKKAQNLSILLRALNLTTEEVCDALYEGNELPVELCQTLLKMAPTAEE 1229
            Q+PSTQYIQI+D+KKAQNLSILLRALN+T EEVCDAL EGNELPVEL QTLLKMAPTA+E
Sbjct: 563  QEPSTQYIQILDTKKAQNLSILLRALNVTIEEVCDALREGNELPVELLQTLLKMAPTADE 622

Query: 1230 ELKLRLYSGELSQLGPAERFLKILVDIPFAFRRLDSLCFMSSYQEEVSSVKESLATLEVA 1409
            ELKLR++SGELSQLGPAERFLK LV+IPFA++RL++L FM + QEEV++ KES  TLEVA
Sbjct: 623  ELKLRVFSGELSQLGPAERFLKALVEIPFAYKRLEALLFMCTLQEEVTTTKESFETLEVA 682

Query: 1410 CKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGIDGKTTLLNFV 1589
            CKELR+SRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKG DGKTTLL+FV
Sbjct: 683  CKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGADGKTTLLHFV 742

Query: 1590 VLEIIRSEGIRAARAARESQSLS--SVKSDDLFEDSLHETEEHYGSLGLQVVSSLGGELE 1763
            V EIIRSEG+RAARAA+ES++ S  SV ++DL ED   +TEE Y SLGLQVVS L  ELE
Sbjct: 743  VQEIIRSEGVRAARAAKESRTFSNVSVTTEDLLEDISPDTEEDYRSLGLQVVSRLSSELE 802

Query: 1764 NVKKASAQDADGLSGTVAKLENALSKSREFLNSEMKSLEEDSGFHRILQSFVQNAEVDIK 1943
            NVKKA+  DAD L GTVAKL ++L K+++FLN +MKSLE  S FH  L+SFVQNAEVD+ 
Sbjct: 803  NVKKAANVDADSLIGTVAKLGHSLLKTKDFLNKDMKSLEGGSEFHETLKSFVQNAEVDVM 862

Query: 1944 WLLEEEKRIMSLVRSTADYFHGNAKKDEGLRLFVIVRNFLIMLDKTCKEVKESTVKAARI 2123
             LLEEEKRIM+L++ST DYFHG A KDEGLRLFVIVR+FLI+LDK CK+V E+  K+A+ 
Sbjct: 863  LLLEEEKRIMALMKSTGDYFHGKAGKDEGLRLFVIVRDFLIILDKVCKQVGEAQKKSAKS 922

Query: 2124 PRNK-------ESPSVPPSPDLHQRLFPAIVDRR 2204
             + +        SP    SPD   RLFPAI +RR
Sbjct: 923  LKKESSTASSHSSPRQHLSPDFRSRLFPAIAERR 956


Top