BLASTX nr result
ID: Coptis23_contig00004105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004105
(1906 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279648.2| PREDICTED: protein FAF-like, chloroplastic [... 279 2e-72
emb|CAN72229.1| hypothetical protein VITISV_024734 [Vitis vinifera] 279 2e-72
ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|2... 253 2e-64
ref|XP_002314255.1| predicted protein [Populus trichocarpa] gi|2... 248 3e-63
emb|CBI24433.3| unnamed protein product [Vitis vinifera] 248 5e-63
>ref|XP_002279648.2| PREDICTED: protein FAF-like, chloroplastic [Vitis vinifera]
Length = 466
Score = 279 bits (714), Expect = 2e-72
Identities = 204/525 (38%), Positives = 278/525 (52%), Gaps = 47/525 (8%)
Frame = -2
Query: 1647 KMSTAVNMNVSNEL---QGIGSILGSSKYERSK--TMRRTLSADMSSKKWLVQNGFSPLK 1483
++S+++ M+ +L QGI SILGS ER+K ++RRTLS DMSS+KWL Q+GFS ++
Sbjct: 10 RLSSSLKMDEEAKLIEKQGIVSILGSD-CERTKAASLRRTLSWDMSSRKWLAQHGFSHMR 68
Query: 1482 RIASSEEFQVT-------SDGDSPIWNSKKEKEPPGQSDIWNSIVSQK-------SSPLA 1345
+IASS++F V+ S+G+ + KE E PG W+SI++QK S L
Sbjct: 69 KIASSQQFIVSAADSSSSSEGEDE-YEEGKEVERPGGFQTWSSILTQKGGEESGKSGTLP 127
Query: 1344 TPYVHPLAKRARS-LSKRSLEICTESLGSETGSDGFXXXXXXXXXXXXXXXXXXXXXXXS 1168
PYVHPL KR+ S LS++SL++CTESLGSETGS+GF
Sbjct: 128 LPYVHPLVKRSSSSLSEKSLQVCTESLGSETGSEGFSSSANTQEDKQDQQQQNQHQQKQQ 187
Query: 1167 ---------AVVKQEMGGVMKYSSH-AVKKXXXXXXXXXXXXLCQS-----GIHMRSHRK 1033
++ KQE+ V + ++ +V+K S + +HR+
Sbjct: 188 QQQYEKESSSLGKQELTVVERPDNYYSVRKRLQPPSSFPPPLPSLSPTQGPNVRFHTHRQ 247
Query: 1032 DGRLVLEAVPTPAPSQSYFQAQREGGRLLLTFVNPKCNETTNTENIKESTEENCNLKITI 853
+GRLVLEAV P +Q+ FQAQR GGRL+LTF N N E T EN
Sbjct: 248 NGRLVLEAVSVP--TQNCFQAQRHGGRLVLTFANIPFNH--------EDTNEN------- 290
Query: 852 QKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQVMMDRGTVLEMKLSQPTN- 676
+ + G V+++ + N
Sbjct: 291 ---------------------------------------GEAASEEGEVVKVGKANEFNQ 311
Query: 675 ------KLPTGVISVHRSALMANKQLAGLTNRDPTWSPKLEMNIGTEE-TPFTQSLPPPP 517
KLP+G+I+VHRSALM K+L GL NR+PTW PKL EE TP LPPPP
Sbjct: 312 EMEAAPKLPSGMINVHRSALMM-KKLMGLVNRNPTWPPKLNKAANLEEATP----LPPPP 366
Query: 516 LVSRL--TP--SSAASSFNTYDYCWRTKAAAPPTAVCTPHPLTQQLPPINKHNKFIVHKN 349
V+R+ TP ++AASSFN YDYCWR+K PPT +P +P N +KF + K+
Sbjct: 367 RVARIITTPPAATAASSFNAYDYCWRSK---PPTGTAILNP--PSIPLKNNSDKFFLSKS 421
Query: 348 INPQANQELVLMRGNNADYLVPSVKGCKEPRRSLIMWEPYCIATS 214
Q Q+L+L+RGN A+Y VP ++GCKEPRRSL++WEPYCIATS
Sbjct: 422 SKAQEQQQLILLRGNKAEYSVPLLRGCKEPRRSLVIWEPYCIATS 466
>emb|CAN72229.1| hypothetical protein VITISV_024734 [Vitis vinifera]
Length = 500
Score = 279 bits (713), Expect = 2e-72
Identities = 204/526 (38%), Positives = 284/526 (53%), Gaps = 48/526 (9%)
Frame = -2
Query: 1647 KMSTAVNMNVSNEL---QGIGSILGSSKYERSK--TMRRTLSADMSSKKWLVQNGFSPLK 1483
++S+++ M+ +L QGI SILGS ER+K ++RRTLS DMSS+K L Q+GFS ++
Sbjct: 10 RLSSSLKMDEEAKLIEKQGIVSILGSD-CERTKAASLRRTLSWDMSSRKXLAQHGFSHMR 68
Query: 1482 RIASSEEFQVT-------SDGDSPIWNSKKEKEPPGQSDIWNSIVSQK-------SSPLA 1345
+IASS++F V+ S+G+ + KE E PG W+SI++QK S L
Sbjct: 69 KIASSQQFIVSAADSSSSSEGEDE-YEEGKEVERPGGFQTWSSILTQKGGEESGKSGTLP 127
Query: 1344 TPYVHPLAKRARS-LSKRSLEICTESLGSETGSDGFXXXXXXXXXXXXXXXXXXXXXXXS 1168
PYVHPL KR+ S LS++SL++CTESLGSETGS+GF
Sbjct: 128 LPYVHPLVKRSSSSLSEKSLQVCTESLGSETGSEGFSSSANTQEDKQDQQQQNQHQQKQQ 187
Query: 1167 ---------AVVKQEMGGVMKYSSH-AVKKXXXXXXXXXXXXLCQS-----GIHMRSHRK 1033
++ KQE+ V + ++ +V+K S + +HR+
Sbjct: 188 QQQYEKESSSLGKQELTVVERPDNYYSVRKRLQPPSSFPPPLPSLSPTQGPNVRFHTHRQ 247
Query: 1032 DGRLVLEAVPTPAPSQSYFQAQREGGRLLLTFVN-PKCNETTNTENIKESTEENCNLKIT 856
+GRLVLEAV P +Q+ FQAQR GGRL+LTF N P +E T+ + E EE ++
Sbjct: 248 NGRLVLEAVSVP--TQNCFQAQRHGGRLVLTFANIPFNHEDTSXKEQDEEEEEEAAEELG 305
Query: 855 IQKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQVMMDRGTVLEMKLSQPTN 676
+ + + G V+++ + N
Sbjct: 306 QE---------------------FETFEEENEIQMNEDENGEAASEEGEVVKVGKANEFN 344
Query: 675 -------KLPTGVISVHRSALMANKQLAGLTNRDPTWSPKLEMNIGTEE-TPFTQSLPPP 520
KLP+G+I+VHRSALM K+L GL NR+PTW PKL EE TP LPPP
Sbjct: 345 QEMEAAPKLPSGMINVHRSALMM-KKLMGLVNRNPTWPPKLNKAANLEEATP----LPPP 399
Query: 519 PLVSRL--TP--SSAASSFNTYDYCWRTKAAAPPTAVCTPHPLTQQLPPINKHNKFIVHK 352
P V+R+ TP ++AASSFN YDYCWR+K PPT +P +P N +KF + K
Sbjct: 400 PRVARIITTPPAATAASSFNAYDYCWRSK---PPTGTAILNP--PSIPLKNNSDKFFLSK 454
Query: 351 NINPQANQELVLMRGNNADYLVPSVKGCKEPRRSLIMWEPYCIATS 214
+ Q Q+L+L+RGN A+Y VP ++GCKEPRRSL++WEPYCIATS
Sbjct: 455 SSKAQEQQQLILLRGNKAEYSVPLLRGCKEPRRSLVIWEPYCIATS 500
>ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|222847028|gb|EEE84575.1|
predicted protein [Populus trichocarpa]
Length = 476
Score = 253 bits (645), Expect = 2e-64
Identities = 194/503 (38%), Positives = 247/503 (49%), Gaps = 39/503 (7%)
Frame = -2
Query: 1605 QGIGSILGSSKYERSKT----MRRTLSADMSSKKWLVQNGFSPLKRIASSEEFQVTSD-- 1444
QGI SILGS ER+K+ +RRTLSADMSSKKW Q+GF PLK+IASS+ F ++
Sbjct: 26 QGIVSILGSD-VERTKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPAWTEAQ 84
Query: 1443 GDSPIWNS------KKEKEPPGQSDIWNSIVSQKS---SPLATPYVHPLAKR-ARSLSKR 1294
G IW+S KKE E PGQ D+W+SI+SQK+ S PYVHPL KR A SLSK+
Sbjct: 85 GQFDIWSSIQEDKNKKEVEKPGQFDVWSSILSQKTKEDSKNVQPYVHPLVKRSASSLSKK 144
Query: 1293 SLEICTESLGSETGSDGFXXXXXXXXXXXXXXXXXXXXXXXSAV-VKQEMGGVMKY---S 1126
SLEICTESLGSETGSDGF + E V KY +
Sbjct: 145 SLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQRQERVTLKFDTEDLRVAKYNLAA 204
Query: 1125 SHAVKKXXXXXXXXXXXXLCQSG--IHMRSHRKDGRLVLEAVPTPAPSQSYFQAQREGGR 952
++ K + G + M+S R +GRLVLEAV PSQ F AQR+ GR
Sbjct: 205 ANCKKSQPRSFPPPIPSLSSRDGASVLMKSRRDNGRLVLEAV--SVPSQKNFHAQRQDGR 262
Query: 951 LLLTFVNPKCNETTNTENIKESTEENCNLKITIQKYXXXXXXXXXXXXXXXXXXXXXXXX 772
L+LTF N + +E ++N + + Q
Sbjct: 263 LVLTFAN-------TVDQDEEERQKNEEMNVMEQ------------------FDVEIENS 297
Query: 771 XXXXXXXXXXXXEQVMMDRGTVLEMKLSQPTNKLPTGVISVHRSALMANKQLAGLTNRDP 592
+ ++ V + + + +K +GVISVHR ALM NK L NR+P
Sbjct: 298 EDEKECEEDEEEVEEEIEEDVVEDGENERGGDKEASGVISVHRLALMMNKSLV-FANRNP 356
Query: 591 TWSPKLE--MNIGTEE--TPFTQSLPPPPLVSRLTPS-------------SAASSFNTYD 463
TW K G E T TQSLPP P V+R+ PS AA+SFN +
Sbjct: 357 TWPNKFNDISKFGEVEPITSLTQSLPPRPPVARMIPSPPAATMATTEVTAKAAASFNACE 416
Query: 462 YCWRTKAAAPPTAVCTPHPLTQQLPPINKHNKFIVHKNINPQANQELVLMRGNNADYLVP 283
Y W+ K+ T +KF+ P QELV++RGN DYLVP
Sbjct: 417 YFWKPKSMTTTTT-----------------SKFV------PNEQQELVVLRGNKGDYLVP 453
Query: 282 SVKGCKEPRRSLIMWEPYCIATS 214
+K CKEPR+SL+ WEP+CIATS
Sbjct: 454 LLKSCKEPRKSLLFWEPHCIATS 476
>ref|XP_002314255.1| predicted protein [Populus trichocarpa] gi|222850663|gb|EEE88210.1|
predicted protein [Populus trichocarpa]
Length = 528
Score = 248 bits (634), Expect = 3e-63
Identities = 199/546 (36%), Positives = 257/546 (47%), Gaps = 66/546 (12%)
Frame = -2
Query: 1653 SKKMSTAVNMNVSNELQGIGSILGSSKYERSKT----MRRTLSADMSSKKWLVQNGFSPL 1486
S M + M V + QGI SILG ER+K+ +RRTLSADMSSKKW Q+GF PL
Sbjct: 11 SSSMEEEMMMVVVPKKQGIVSILGCD-VERTKSAAASLRRTLSADMSSKKWQAQHGFYPL 69
Query: 1485 KRIASSEEF----QVTSDGDS----------------PIWNS------KKEKEPPGQSDI 1384
K+IASS+ F +T + IW+S KKE E PGQ D+
Sbjct: 70 KKIASSDHFPACDSITDSSEDEDFEDRPKETETRDQFDIWSSIQEDKNKKEVEKPGQFDV 129
Query: 1383 WNSIVSQKS---SPLATPYVHPLAKR-ARSLSKRSLEICTESLGSETGSDGFXXXXXXXX 1216
W+SI+SQK+ S PYVHPL KR A SLS++SLEICTESLGSETG DGF
Sbjct: 130 WSSILSQKAKEDSKDVQPYVHPLVKRSASSLSEKSLEICTESLGSETGCDGF-SSYPPSE 188
Query: 1215 XXXXXXXXXXXXXXXSAVVKQEMGGV--MKY---SSHAVKKXXXXXXXXXXXXLCQSG-- 1057
K +M + KY +S++ K + G
Sbjct: 189 IGDAEDEKEEEQLQERVTQKFDMEDLRAAKYNLAASNSKKSQPRSFPPPIPSLSSRDGAS 248
Query: 1056 IHMRSHRKDGRLVLEAVPTPAPSQSYFQAQREGGRLLLTFVNPKCNETTNTENIKESTEE 877
+HMRS R +GRLVLE V PSQ+ F AQR+ GRL+LT N T N E + E
Sbjct: 249 VHMRSRRDNGRLVLEVV--SVPSQNNFHAQRQDGRLVLTLAN-----TANQEEEERQKNE 301
Query: 876 NCNLKITIQKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQVMMDRGTVLEM 697
+ ++++ VM
Sbjct: 302 EMS---DVEQFDVEIENSERKEEVEEEIEEGEVEDGEDKRGGGGEGVRFVM--------- 349
Query: 696 KLSQPTNKLPTGVISVHRSALMANKQLAGLTNRDPTWSPKL--------EMNIGTEETPF 541
+ T KL +G++SVHR ALM NK L L NR+P W K E+ + TP
Sbjct: 350 ---EETPKLSSGILSVHRLALMMNKSLV-LANRNPAWPNKFEDMTKFGDEVEVVDPITPI 405
Query: 540 TQSLPP-PPLVSRLTPS-------------SAASSFNTYDYCWRTKAAAPPTAVCTPHPL 403
TQSLPP P +RL PS A +SFN +Y W+ K P T +P+
Sbjct: 406 TQSLPPRRPPATRLIPSPPVATMAAAAATAKATASFNACEYFWKPK---PMTTASVLNPI 462
Query: 402 TQQLPP---INKHNKFIVHKNINPQANQELVLMRGNNADYLVPSVKGCKEPRRSLIMWEP 232
+Q+ N+ + K P QE+V++RGNN DYLVP +K CKE R+SL+ WEP
Sbjct: 463 SQEQASSLGTTHDNRLALSKKFVPNEQQEVVILRGNNEDYLVPLLKSCKEQRKSLLFWEP 522
Query: 231 YCIATS 214
+CIATS
Sbjct: 523 HCIATS 528
>emb|CBI24433.3| unnamed protein product [Vitis vinifera]
Length = 488
Score = 248 bits (632), Expect = 5e-63
Identities = 186/492 (37%), Positives = 258/492 (52%), Gaps = 35/492 (7%)
Frame = -2
Query: 1611 ELQGIGSILGSSKYERSK--TMRRTLSADMSSKKWLVQNGFSPLKRIASSEEFQVT---- 1450
E QGI SILGS ER+K ++RRTLS DMSS+KWL Q+GFS +++IASS++F V+
Sbjct: 9 EKQGIVSILGSD-CERTKAASLRRTLSWDMSSRKWLAQHGFSHMRKIASSQQFIVSAADS 67
Query: 1449 ---SDGDSPIWNSKKEKEPPGQSDIWNSIVSQK-------SSPLATPYVHPLAKRARS-L 1303
S+G+ + KE E PG W+SI++QK S L PYVHPL KR+ S L
Sbjct: 68 SSSSEGEDE-YEEGKEVERPGGFQTWSSILTQKGGEESGKSGTLPLPYVHPLVKRSSSSL 126
Query: 1302 SKRSLEICTESLGSETGSDGFXXXXXXXXXXXXXXXXXXXXXXXSAVVKQEMGGVMKYSS 1123
S++SL++CTESL S + + KQE+ V + +
Sbjct: 127 SEKSLQVCTESLESSS------------------------------LGKQELTVVERPDN 156
Query: 1122 H-AVKKXXXXXXXXXXXXLCQS-----GIHMRSHRKDGRLVLEAVPTPAPSQSYFQAQRE 961
+ +V+K S + +HR++GRLVLEAV P +Q+ FQAQR
Sbjct: 157 YYSVRKRLQPPSSFPPPLPSLSPTQGPNVRFHTHRQNGRLVLEAVSVP--TQNCFQAQRH 214
Query: 960 GGRLLLTFVNPKCNETTNTENIKESTEENCNLKITIQKYXXXXXXXXXXXXXXXXXXXXX 781
GGRL+LTF N N +E ++ EE + Q++
Sbjct: 215 GGRLVLTFANIPFNHEDTSEKEQDEEEEEEAAEELGQEFENFEEENEIQMNEDENG---- 270
Query: 780 XXXXXXXXXXXXXXXEQVMMDRGTVLEMKLSQPTN-------KLPTGVISVHRSALMANK 622
+ + G V+++ + N KLP+G+I+VHRSALM K
Sbjct: 271 ----------------EAASEEGEVVKVGKANEFNQEMEAAPKLPSGMINVHRSALMM-K 313
Query: 621 QLAGLTNRDPTWSPKLEMNIGTEE-TPFTQSLPPPPLVSRL--TP--SSAASSFNTYDYC 457
+L GL NR+PTW PKL EE TP LPPPP V+R+ TP ++AASSFN YDYC
Sbjct: 314 KLMGLVNRNPTWPPKLNKAANLEEATP----LPPPPRVARIITTPPAATAASSFNAYDYC 369
Query: 456 WRTKAAAPPTAVCTPHPLTQQLPPINKHNKFIVHKNINPQANQELVLMRGNNADYLVPSV 277
WR+K PPT +P +P N +KF + K+ Q Q+L+L+RGN A+Y VP +
Sbjct: 370 WRSK---PPTGTAILNP--PSIPLKNNSDKFFLSKSSKAQEQQQLILLRGNKAEYSVPLL 424
Query: 276 KGCKEPRRSLIM 241
+GCKEPRRSL++
Sbjct: 425 RGCKEPRRSLMI 436