BLASTX nr result
ID: Coptis23_contig00004100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004100 (1993 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 603 e-170 ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 548 e-153 ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2... 548 e-153 ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 532 e-148 ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [S... 437 e-120 >ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial [Vitis vinifera] gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera] Length = 765 Score = 603 bits (1556), Expect = e-170 Identities = 291/461 (63%), Positives = 373/461 (80%) Frame = +2 Query: 2 EASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVL 181 EA+ NALLT LG +F++MN L++EMKE I+P+ +TFGI I +LCK RR+ +A+EV Sbjct: 304 EAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF 363 Query: 182 ESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYNCL 361 E M + NG V PD+I YNT+I GLC+VGRQEEGL LV++MR++ NT+TYNCL Sbjct: 364 EKMNGGESNGFL-VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCL 422 Query: 362 LDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKGL 541 +DG+CKA I+ +RELFDQMN++GVP +V+TLN LVDGMCKHGRI+ A EFFN+MQ KGL Sbjct: 423 IDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGL 482 Query: 542 KANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDACS 721 K NA+TYT+LI AFCNVNN+ KA +FD M+ +GC PD +VYY+LI+G S+AG+LD A Sbjct: 483 KGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASF 542 Query: 722 VASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIASFS 901 V SKMK GF D +S+NVLI+GFC+KNKL + +E+L +ME +G++PD +TYNTLI+ FS Sbjct: 543 VLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS 602 Query: 902 KSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRMGSTSKVPPNT 1081 K+G+F T H+LM KM ++GLVPTVVT+GA+IH YC G L++A++IFR M STSKVPPNT Sbjct: 603 KTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNT 662 Query: 1082 VIYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDE 1261 VIYNILI+SLC+ ++ A++LMDDMKVKGV PN T+NAMF+GLQE+ WL KA++LMD Sbjct: 663 VIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDR 722 Query: 1262 MNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFS 1384 M E ACNPDY+TMEILTEWLSAVGETA+LKSFV+GYEV+ S Sbjct: 723 MTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSAS 763 Score = 169 bits (428), Expect = 3e-39 Identities = 110/422 (26%), Positives = 204/422 (48%), Gaps = 9/422 (2%) Frame = +2 Query: 125 IRILYLCKSRRLGQAMEVLESMKKEKENGGASVVPDLIAYNTVIKGLCQVGR---QEEGL 295 I I L + R+ A+ +L+ M + K + I ++ + K +VGR +EE + Sbjct: 197 ILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKR-DKVGRAVDEEEIV 255 Query: 296 VLVDKMRAEHGYAANTITYNCLLDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDG 475 LV K AEH N+I L+ C++G DR+ ++ + + G + + N L+ Sbjct: 256 GLVSKF-AEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTA 314 Query: 476 MCKHGRISSAFEFFNDMQKKGLKANAITYTSLISAFCNVNNLGKATAMFDLM---VSSGC 646 + + +M++ ++ N +T+ LI+ C + +A +F+ M S+G Sbjct: 315 LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374 Query: 647 I--PDKVVYYSLINGFSRAGRLDDACSVASKMKSKGFFL-DAMSYNVLISGFCKKNKLSK 817 + PD + Y +LI+G + GR ++ + +M+S+ + + ++YN LI G+CK + + Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEA 434 Query: 818 VHEILNDMELSGVRPDQITYNTLIASFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIH 997 E+ + M GV P+ +T NTL+ K G + +M +GL VT+ A+I Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494 Query: 998 GYCKAGKLNKALEIFRRMGSTSKVPPNTVIYNILIDSLCKGKKIKDAVALMDDMKVKGVL 1177 +C + KA+E+F M + P+ ++Y LI L + K+ A ++ MK G Sbjct: 495 AFCNVNNIEKAMELFDEM-LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553 Query: 1178 PNVITYNAMFRGLQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSF 1357 P+++++N + G + LD+AY+++ EM PD VT L S G+ + Sbjct: 554 PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRL 613 Query: 1358 VK 1363 +K Sbjct: 614 MK 615 Score = 147 bits (370), Expect = 1e-32 Identities = 107/360 (29%), Positives = 171/360 (47%), Gaps = 16/360 (4%) Frame = +2 Query: 353 NCLLDGFCKAGEIDRSRELFDQM--NREGVPADVITLNILVDGMCKHGRISSAFE----- 511 N L+D + G +D + L D+M + P + T +I+ + K ++ A + Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255 Query: 512 -FFNDMQKKGLKANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGF 688 + + + N+I T LIS C +A + ++ G + + +L+ Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315 Query: 689 SRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLS---KVHEILNDMELSG-- 853 RA ++ ++MK + +++ +LI+ CK ++ +V E +N E +G Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375 Query: 854 VRPDQITYNTLIASFSKSGNFKTVHQLMTKMTEQ-GLVPTVVTFGAVIHGYCKAGKLNKA 1030 V PD ITYNTLI K G + L+ +M Q +P VT+ +I GYCKA + A Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435 Query: 1031 LEIFRRMGSTSKVPPNTVIYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFR 1210 E+F +M VPPN V N L+D +CK +I AV ++M+ KG+ N +TY A+ R Sbjct: 436 RELFDQMNKDG-VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494 Query: 1211 GLQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFV--KGYEVAFS 1384 ++KA +L DEM E C+PD + L LS G+ R SFV K E FS Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDR-ASFVLSKMKEAGFS 553 >ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucumis sativus] gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucumis sativus] Length = 660 Score = 548 bits (1413), Expect = e-153 Identities = 272/457 (59%), Positives = 344/457 (75%), Gaps = 2/457 (0%) Frame = +2 Query: 2 EASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVL 181 +A+ NALLTGLG +F KMNLL+ +MK+ I+P ITFGI I +LCK RR+ A+EV Sbjct: 151 DAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVF 210 Query: 182 ESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYNCL 361 E MK EKE V PD I YNT+I GLC+VGRQEE L L+ KMR++ A T T+NCL Sbjct: 211 EKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQ-CAPTTATFNCL 269 Query: 362 LDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKGL 541 ++G+C++GEI+ + +LF++M + +VITLN LVDGMCKH RIS+A EFF MQ+KGL Sbjct: 270 INGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGL 329 Query: 542 KANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDACS 721 K N +TYT I+AFCNVNN+ KA D M GC PD VVYY+LI G ++AGRLDDA S Sbjct: 330 KGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASS 389 Query: 722 VASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIASFS 901 V SK+K GF LD + YNVLIS FCKKNKL + E LN+MEL+GV+PD +TYNTLI+ FS Sbjct: 390 VVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFS 449 Query: 902 KSGNFKTVHQLMTKMT-EQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRMGS-TSKVPP 1075 K GNFK H+ M KMT E+GL PTV T+GA+IH YC +++A++IF+ M + SKVPP Sbjct: 450 KIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPP 509 Query: 1076 NTVIYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLM 1255 NTVIYNILIDSLCK ++ A++L+DDMK +GV+PN TYN++F+ L+++ WLDKA+KLM Sbjct: 510 NTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLM 569 Query: 1256 DEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKG 1366 D M EQACNPDY+TMEILTEWLSAVGE +LK F +G Sbjct: 570 DRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQG 606 Score = 142 bits (359), Expect = 3e-31 Identities = 108/411 (26%), Positives = 179/411 (43%), Gaps = 17/411 (4%) Frame = +2 Query: 251 VIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYNCLLDGFCKAGEIDRSRELFDQM--- 421 +++ L ++G +E L + + +A NT N +++ K+G +D + + D+M Sbjct: 12 LLRRLGRIGMVDEALAAFSTLDS---HAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLP 68 Query: 422 NREGVPAD----VITLNIL----VDGMCKHGRISSAFEFFNDMQKKGLKANAITYTSLIS 577 E P D ++ N+L ++G K I+ F K + + I T LIS Sbjct: 69 ESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFG---KHNIFPDTIALTQLIS 125 Query: 578 AFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDACSVASKMKSKGFFL 757 C N A + D ++ + D +L+ G +A + KMK Sbjct: 126 KLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQP 185 Query: 758 DAMSYNVLISGFCKKNKLSKVHEILNDMELSG------VRPDQITYNTLIASFSKSGNFK 919 +++ +LI+ CK ++ E+ M+ V PD I YNTLI K G + Sbjct: 186 TVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQE 245 Query: 920 TVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRMGSTSKVPPNTVIYNIL 1099 LM KM PT TF +I+GYC++G++ A ++F M +++ PN + N L Sbjct: 246 EALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM-ENAQIEPNVITLNTL 304 Query: 1100 IDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDEMNEQAC 1279 +D +CK +I AV M+ KG+ N +TY ++KA + +DEM++ C Sbjct: 305 VDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGC 364 Query: 1280 NPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFSNIDRKKPVPKT*VCYS 1432 PD V L L+ G S V + A +DR VCY+ Sbjct: 365 FPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR--------VCYN 407 >ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa] Length = 775 Score = 548 bits (1413), Expect = e-153 Identities = 266/467 (56%), Positives = 356/467 (76%), Gaps = 2/467 (0%) Frame = +2 Query: 2 EASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVL 181 E++ N+LLTGL E F +MN L+ +M E I+P+ +TFGI I ++CK RR+ A+EVL Sbjct: 304 ESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVL 363 Query: 182 ESMKKEKENGG--ASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYN 355 E M KE+GG SV PD++ YNT+I GLC+VGRQ+EGL L+++MR++ G A +TITYN Sbjct: 364 EKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYN 423 Query: 356 CLLDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKK 535 CL+DGFCKAGEI++ +ELFD+MN+EGV +V+T+N LV GMC+ GR+SSA FF + Q++ Sbjct: 424 CLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRR 483 Query: 536 GLKANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDA 715 G+K +A+TYT+LI+AFCNVNN KA +F+ M+ SGC PD +VYY+LI+GFS+AGR+ DA Sbjct: 484 GMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADA 543 Query: 716 CSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIAS 895 V +++K G D + YN LI GFC+ NK +V E+L +ME +G++PD ITYNTLIA Sbjct: 544 SFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAY 603 Query: 896 FSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRMGSTSKVPP 1075 SK+G+ K ++M KM + G+VPTV T+GAVI+ YC G N+A+EIF+ M + SKVPP Sbjct: 604 ASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPP 663 Query: 1076 NTVIYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLM 1255 NTVIYNILI+SLCK K+K AV+LM+DMK+ GV PN TYNA+F+GL++EK L+K ++ M Sbjct: 664 NTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFM 723 Query: 1256 DEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFSNIDR 1396 D M E ACNPDY+TMEILTEWLSAVGE RLK FV G EV+ S + Sbjct: 724 DRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSSTAQK 770 Score = 169 bits (428), Expect = 3e-39 Identities = 105/414 (25%), Positives = 194/414 (46%), Gaps = 15/414 (3%) Frame = +2 Query: 140 LCKSRRLGQAMEVLESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLV------L 301 L +S R+ A++V++ M + ++ P+ + + L + R EE L L Sbjct: 200 LLRSGRVKDALKVIDEMFESNDDSNCR--PNDATGDILFSFLLKRERNEELLSEDEIVNL 257 Query: 302 VDKMRAEHGYAANTITYNCLLDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMC 481 V K EHG ++ L+ C+ + +R +LF +M + G + N L+ G+ Sbjct: 258 VLKF-GEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLA 316 Query: 482 KHGRISSAFEFFNDMQKKGLKANAITYTSLISAFCNVNNLGKATAMFDLM--------VS 637 + G + E M + ++ N +T+ LI+ C + A + + M +S Sbjct: 317 REGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGIS 376 Query: 638 SGCIPDKVVYYSLINGFSRAGRLDDACSVASKMKS-KGFFLDAMSYNVLISGFCKKNKLS 814 PD V+Y +LI+G + GR + + +M+S KG D ++YN LI GFCK ++ Sbjct: 377 VSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436 Query: 815 KVHEILNDMELSGVRPDQITYNTLIASFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVI 994 K E+ ++M GV P+ +T NTL+ ++G + + +G+ VT+ A+I Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496 Query: 995 HGYCKAGKLNKALEIFRRMGSTSKVPPNTVIYNILIDSLCKGKKIKDAVALMDDMKVKGV 1174 + +C KA+E+F M S P+ ++Y LI + ++ DA ++ ++K G+ Sbjct: 497 NAFCNVNNFEKAMELFNEM-LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGI 555 Query: 1175 LPNVITYNAMFRGLQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGE 1336 P+ + YN + G + ++++ EM E PD +T L + S G+ Sbjct: 556 RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609 Score = 126 bits (317), Expect = 2e-26 Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 16/345 (4%) Frame = +2 Query: 371 FCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQK--KGLK 544 FC+ L+ +P V + L+ + + + FND+ K Sbjct: 132 FCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPSVKNTY 191 Query: 545 ANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKV---VYYSLINGFSRAGRL--- 706 + + L+ + + L MF+ S C P+ + +S + R L Sbjct: 192 LRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSE 251 Query: 707 DDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTL 886 D+ ++ K G + + LI+ C+ K ++ ++ +M G + N+L Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311 Query: 887 IASFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRM----- 1051 + ++ GNF +++LM KM E + P VVTFG +I+ CK +++ ALE+ +M Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371 Query: 1052 --GSTSKVPPNTVIYNILIDSLCKGKKIKDAVALMDDMK-VKGVLPNVITYNAMFRGLQE 1222 G + V P+ VIYN LID LCK + ++ + LM+ M+ KG P+ ITYN + G + Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431 Query: 1223 EKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSF 1357 ++K +L DEMN++ P+ VT+ L + G + +F Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476 >ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Glycine max] Length = 746 Score = 532 bits (1370), Expect = e-148 Identities = 256/456 (56%), Positives = 347/456 (76%) Frame = +2 Query: 5 ASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVLE 184 ASC NALLT LG ++MN L++EM+++ IRP +TFGI + +LCK+RR+ +A++V + Sbjct: 282 ASC-NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFD 340 Query: 185 SMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYNCLL 364 ++ + + V PD++ +NT+I GLC+VG++E+GL L+++M+ + NT+TYNCL+ Sbjct: 341 RLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLI 400 Query: 365 DGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKGLK 544 DGF KAG DR+ ELF QMN EGV +VITLN LVDG+CKHGR+ A EFFN+M+ KGLK Sbjct: 401 DGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLK 460 Query: 545 ANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDACSV 724 NA TYT+LISAFC VNN+ +A F+ M+SSGC PD VVYYSLI+G AGR++DA V Sbjct: 461 GNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVV 520 Query: 725 ASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIASFSK 904 SK+K GF LD YNVLISGFCKK KL +V+E+L +ME +GV+PD ITYNTLI+ K Sbjct: 521 VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580 Query: 905 SGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRMGSTSKVPPNTV 1084 +G+F T ++M KM ++GL P+VVT+GA+IH YC +++ ++IF M STSKVPPNTV Sbjct: 581 TGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTV 640 Query: 1085 IYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDEM 1264 IYNILID+LC+ + A++LM+DMKVK V PN TYNA+ +G++++K L KA++LMD M Sbjct: 641 IYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRM 700 Query: 1265 NEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYE 1372 E+AC PDY+TME+LTEWLSAVGE +LK FV+GY+ Sbjct: 701 VEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQ 736 Score = 118 bits (296), Expect = 5e-24 Identities = 75/275 (27%), Positives = 140/275 (50%), Gaps = 12/275 (4%) Frame = +2 Query: 569 LISAFCNVNNLGKATAMFDLM--VSSG-CIPDKVVYYSLINGFSRAGRL---DDACSVAS 730 L+ G A + D M +SG + ++V+ L+ R+GR + + + Sbjct: 180 LLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELV----RSGRSFPDGEVVGLVA 235 Query: 731 KMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIASFSKSG 910 K+ +G F D L+ C K E+L+ + G D + N L+ + Sbjct: 236 KLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGR 295 Query: 911 NFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRM-----GSTSKVPP 1075 + K +++L+ +M ++ + P+VVTFG +++ CKA ++++AL++F R+ + V P Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355 Query: 1076 NTVIYNILIDSLCKGKKIKDAVALMDDMKVKGV-LPNVITYNAMFRGLQEEKWLDKAYKL 1252 + V++N LID LCK K +D ++L+++MK+ + PN +TYN + G + D+A++L Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415 Query: 1253 MDEMNEQACNPDYVTMEILTEWLSAVGETARLKSF 1357 +MNE+ P+ +T+ L + L G R F Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450 Score = 112 bits (281), Expect = 3e-22 Identities = 94/387 (24%), Positives = 165/387 (42%), Gaps = 5/387 (1%) Frame = +2 Query: 251 VIKGLCQVGRQEEGLVLVDKM-RAEHGYAANTITYNCLLDGFCKAGEIDRSRE---LFDQ 418 +++ L + GR + L ++D+M +A G++ +T + ++G E L + Sbjct: 180 LLRVLLKSGRAGDALHVLDEMPQANSGFS---VTGEIVFGELVRSGRSFPDGEVVGLVAK 236 Query: 419 MNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKGLKANAITYTSLISAFCNVNN 598 + GV D L LV +C + A+E + + + G +A + +L++ + Sbjct: 237 LGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRD 296 Query: 599 LGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDACSVASKMKSKGFFLDAMSYNV 778 + + + M P V + L+N +A R+D+A V +++ KG Sbjct: 297 IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKG---------- 346 Query: 779 LISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIASFSKSGNFKTVHQLMTKMTEQG 958 GV PD + +NTLI K G + L+ +M Sbjct: 347 -------------------GSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN 387 Query: 959 LV-PTVVTFGAVIHGYCKAGKLNKALEIFRRMGSTSKVPPNTVIYNILIDSLCKGKKIKD 1135 + P VT+ +I G+ KAG ++A E+FR+M V PN + N L+D LCK ++ Sbjct: 388 INRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG-VQPNVITLNTLVDGLCKHGRVHR 446 Query: 1136 AVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTE 1315 AV ++MK KG+ N TY A+ +++A + +EM C+PD V L Sbjct: 447 AVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLIS 506 Query: 1316 WLSAVGETARLKSFVKGYEVAFSNIDR 1396 L G V ++A ++DR Sbjct: 507 GLCIAGRMNDASVVVSKLKLAGFSLDR 533 Score = 109 bits (272), Expect = 3e-21 Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 1/237 (0%) Frame = +2 Query: 2 EASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVL 181 +A + +L++GL + + +++VS++K G D + + I CK ++L + E+L Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556 Query: 182 ESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYNCL 361 M++ V PD I YNT+I L + G +++KM E G + +TY + Sbjct: 557 TEMEE------TGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKE-GLRPSVVTYGAI 609 Query: 362 LDGFCKAGEIDRSRELFDQM-NREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKG 538 + +C +D ++F +M + VP + + NIL+D +C++ + A DM+ K Sbjct: 610 IHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKR 669 Query: 539 LKANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLD 709 ++ N TY +++ + L KA + D MV C PD + L S G ++ Sbjct: 670 VRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIE 726 Score = 101 bits (251), Expect = 8e-19 Identities = 56/202 (27%), Positives = 101/202 (50%) Frame = +2 Query: 2 EASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVL 181 + SC+N L++G + + E++ L++EM+E G++PD IT+ I YL K+ A +V+ Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591 Query: 182 ESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAANTITYNCL 361 E M KE + P ++ Y +I C +EG+ + +M + NT+ YN L Sbjct: 592 EKMIKE------GLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645 Query: 362 LDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKGL 541 +D C+ ++DR+ L + M + V + T N ++ G+ + AFE + M ++ Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC 705 Query: 542 KANAITYTSLISAFCNVNNLGK 607 + + IT L V + K Sbjct: 706 RPDYITMEVLTEWLSAVGEIEK 727 >ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor] gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor] Length = 607 Score = 437 bits (1124), Expect = e-120 Identities = 206/457 (45%), Positives = 316/457 (69%), Gaps = 3/457 (0%) Frame = +2 Query: 2 EASCFNALLTGLGLESQFEKMNLLVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAMEVL 181 + S FN+LL+ LG M L + M+E ++PD +T+GI + LCK+ +G A++VL Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVL 189 Query: 182 ESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVD-KMRAEHGYAANTITYNC 358 + M G+ V D++ NTV+ GLC++GR ++ +V VD +MR HG A NT+TYNC Sbjct: 190 DRMSSP----GSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNC 245 Query: 359 LLDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFFNDMQKKG 538 L D C+ G+ID + ++ ++M +EGV +VIT+N +V G+C+ GR+ +A +FF + + Sbjct: 246 LADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTW 305 Query: 539 LKA--NAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDD 712 L+A NA+TY++L+SAF + NN+ A +F M G PD V+Y+++I+G ++AGRL D Sbjct: 306 LEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVD 365 Query: 713 ACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIA 892 AC++A+ MK GF LD +YN+LI GFC+K +L + H++ +M+ +G++PD TYNTL++ Sbjct: 366 ACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLS 425 Query: 893 SFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEIFRRMGSTSKVP 1072 K+G+F V +L+ M + G P+VVTFG ++HGYCKAGK ++AL+IFR MG +++ Sbjct: 426 CLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGE-ARIQ 484 Query: 1073 PNTVIYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKL 1252 PNTVIYN LID LCK +++ A+ L D+M+ V NV TYNA+ +GLQ++ +KA++L Sbjct: 485 PNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFEL 544 Query: 1253 MDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVK 1363 MD+M E+ C PDYVTM++L EWL +GET RLK F++ Sbjct: 545 MDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFME 581 Score = 152 bits (384), Expect = 3e-34 Identities = 91/342 (26%), Positives = 159/342 (46%), Gaps = 6/342 (1%) Frame = +2 Query: 332 AANTITYNCLLDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFE 511 A + T+N LL +AG + ELF M V D++T IL++ +CK G + A + Sbjct: 128 APDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALK 187 Query: 512 FFNDMQKKG--LKANAITYTSLISAFCNVNNLGKATAMFD--LMVSSGCIPDKVVYYSLI 679 + M G + A+ + +++ C + L A D + GC P+ V Y L Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247 Query: 680 NGFSRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGV- 856 + R G +D AC + +M+ +G + ++ N ++ G C+ ++ + + + + Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307 Query: 857 -RPDQITYNTLIASFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKAL 1033 R + +TY+TL+++F N +L +M +QG P V + +I G +AG+L A Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367 Query: 1034 EIFRRMGSTSKVPPNTVIYNILIDSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRG 1213 I M + + YNILI C+ K++ +A L ++MK G+ P+V TYN + Sbjct: 368 NIAASM-KKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSC 426 Query: 1214 LQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGET 1339 L + +L+ M + C P VT L G+T Sbjct: 427 LCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKT 468 Score = 125 bits (314), Expect = 4e-26 Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 31/327 (9%) Frame = +2 Query: 71 LVSEMKEKGIRPDGITFGIRILYLCKSRRLGQAME------------------------- 175 +V M+++G+ P+ IT + LC+ R+G A++ Sbjct: 262 IVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSA 321 Query: 176 ------VLESMKKEKENGGASVVPDLIAYNTVIKGLCQVGRQEEGLVLVDKMRAEHGYAA 337 V +M+ E PD + Y T+I GL Q GR + + M+ + G+ Sbjct: 322 FLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMK-KAGFKL 380 Query: 338 NTITYNCLLDGFCKAGEIDRSRELFDQMNREGVPADVITLNILVDGMCKHGRISSAFEFF 517 + YN L+ GFC+ + + +LF++M G+ DV T N L+ +CK G S+ E Sbjct: 381 DRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELL 440 Query: 518 NDMQKKGLKANAITYTSLISAFCNVNNLGKATAMFDLMVSSGCIPDKVVYYSLINGFSRA 697 +M G + + +T+ +L+ +C +A +F M + P+ V+Y +LI+ ++ Sbjct: 441 GNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKS 500 Query: 698 GRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITY 877 +D A + +M+ + +YN L+ G KN K E+++ M+ PD +T Sbjct: 501 REVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTM 560 Query: 878 NTLIASFSKSGNFKTVHQLMTKMTEQG 958 + L+ + G + + M + E+G Sbjct: 561 DVLMEWLPEIGETERLKCFMEQRDEKG 587 Score = 103 bits (256), Expect = 2e-19 Identities = 53/171 (30%), Positives = 95/171 (55%), Gaps = 3/171 (1%) Frame = +2 Query: 860 PDQITYNTLIASFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKALEI 1039 PD T+N+L+++ ++GN + + +L T M E + P +VT+G +++ CKAG + AL++ Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188 Query: 1040 FRRMGST-SKVPPNTVIYNILIDSLCKGKKIKDAVALMDD--MKVKGVLPNVITYNAMFR 1210 RM S S V + VI N ++D LCK +++DA+ +D+ +V G PN +TYN + Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248 Query: 1211 GLQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVK 1363 +D A ++++ M ++ P+ +TM + L VG F + Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFR 299 Score = 87.8 bits (216), Expect = 1e-14 Identities = 65/318 (20%), Positives = 120/318 (37%), Gaps = 75/318 (23%) Frame = +2 Query: 608 ATAMFDLMVSSGCIPDKVVYYSLINGFSRAGRLDDACSVASKMKSKGFFLDAMSYNVLIS 787 A+ + D + + PD + SL++ RAG L + + M+ D ++Y +L++ Sbjct: 115 ASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLN 174 Query: 788 GFCKKNKLSKVHEILNDM---------------------------------------ELS 850 CK + ++L+ M ++ Sbjct: 175 RLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVH 234 Query: 851 GVRPDQITYNTLIASFSKSGNFKTVHQLMTKMTEQGLVPTVVTFGAVIHGYCKAGKLNKA 1030 G P+ +TYN L + + G+ Q++ +M ++G+ P V+T ++ G C+ G++ A Sbjct: 235 GCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA 294 Query: 1031 LEIFRRMGST------------------------------------SKVPPNTVIYNILI 1102 L+ FR +T PP+ V+Y +I Sbjct: 295 LDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMI 354 Query: 1103 DSLCKGKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDEMNEQACN 1282 L + ++ DA + MK G + YN + G +K L +A++L +EM Sbjct: 355 SGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQ 414 Query: 1283 PDYVTMEILTEWLSAVGE 1336 PD T L L G+ Sbjct: 415 PDVYTYNTLLSCLCKAGD 432