BLASTX nr result
ID: Coptis23_contig00004083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004083
(1631 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V... 607 e-171
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V... 601 e-169
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum... 589 e-166
ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|2... 579 e-163
ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus... 577 e-162
>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 607 bits (1564), Expect = e-171
Identities = 319/500 (63%), Positives = 358/500 (71%), Gaps = 2/500 (0%)
Frame = +1
Query: 133 MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 312
MA+ EL +YNT+T++KE F P +GKV MYVCGVTAYD SH+GHARA V FD+LYRYL
Sbjct: 1 MAETTEL-RVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYL 59
Query: 313 QYLGYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 492
Q+LGYEVTYVRNFTDVDDKII+RANE GE+PL LS RFCQE+L+DM DLQCL PT QPRV
Sbjct: 60 QHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRV 119
Query: 493 SDHMNEITDMIKQICNNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 672
SDHM++I DMI QI NND AY DGDVYF++D K+ N Y RLSGRK EDNR G
Sbjct: 120 SDHMDQIKDMITQIINNDCAYII-DGDVYFAVD----KSPN----YGRLSGRKLEDNRAG 170
Query: 673 ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 852
ERV V S+KRNP+DFALWKAAKP EPSWDSPWG GRPGWHIECSAMSA YLT FDIHGG
Sbjct: 171 ERVAVDSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGG 230
Query: 853 GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 1032
G+DLIFPHHENE QSCAAC + N+ YWMHNG VT +EKMSKS GNFFTIR IT YHP
Sbjct: 231 GIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHP 290
Query: 1033 LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEXXXXXXXXXXXXXXXXXXX 1212
LALRYFL+ THYRSPVN+S QLEIAS++VFYIYQTL D E
Sbjct: 291 LALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCE------------------- 331
Query: 1213 XXXXXXXXXXXXNGKVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNTAFLEALRLMN 1392
NG+ IT A++ I KL TDF+TKM DDL T ILN + EALR +N
Sbjct: 332 ---DTLSPFQEVNGQNVCITPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFIN 388
Query: 1393 --XXXXXXXXXXXXXXXXYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAG 1566
SL LEKEVK V++ LGLL YSEVLQQLK KAL RAG
Sbjct: 389 SGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAG 448
Query: 1567 LTEDNVLSLIEERVQARKNR 1626
+ ED+VL LIEER ARKN+
Sbjct: 449 MIEDDVLHLIEERALARKNK 468
>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 601 bits (1549), Expect = e-169
Identities = 315/501 (62%), Positives = 356/501 (71%), Gaps = 2/501 (0%)
Frame = +1
Query: 133 MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 312
MA+ EL +YNT+T++KE P +GKV MYVCGVTAYD SH+GH RA V+FD+LYRYL
Sbjct: 1 MAEMTEL-RVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYL 59
Query: 313 QYLGYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 492
Q+LGYEVTYVRNFTDVDDKII+RANE GE+PL LS FCQE+L+DM DL CL PTHQPRV
Sbjct: 60 QHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRV 119
Query: 493 SDHMNEITDMIKQICNNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 672
SDHM++I DMI QI NND AY T DGDVYF++D K+ N Y RLSGRK E+NR G
Sbjct: 120 SDHMDQIKDMITQIINNDCAY-TIDGDVYFAVD----KSPN----YGRLSGRKLENNRAG 170
Query: 673 ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 852
ERV V S+KRNP+DFALWKAAKPGEPSWDSPWG GRPGWHIECSAMSA YLT FDIHGG
Sbjct: 171 ERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGG 230
Query: 853 GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 1032
G+DLIFPHHENE QSCAAC + N+ YWMHNG VT +EKMSKS GNFFTIR IT YHP
Sbjct: 231 GIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHP 290
Query: 1033 LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEXXXXXXXXXXXXXXXXXXX 1212
LALRYFL+ THYRSPVN+S QLEIAS++VFYIYQTL D E
Sbjct: 291 LALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCE------------------- 331
Query: 1213 XXXXXXXXXXXXNGKVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNTAFLEALRLMN 1392
NG+ I AQ+ I L TDF+TKM DDL T ILN + EALR +N
Sbjct: 332 ---DTLSLFQEVNGRNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFIN 388
Query: 1393 --XXXXXXXXXXXXXXXXYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAG 1566
SL L KEVK V++ LGLL YSEVLQQLK KAL RAG
Sbjct: 389 SCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAG 448
Query: 1567 LTEDNVLSLIEERVQARKNRE 1629
+ ED+VL LIEER ARKN++
Sbjct: 449 MIEDDVLHLIEERALARKNKD 469
>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED:
cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 589 bits (1519), Expect = e-166
Identities = 293/496 (59%), Positives = 360/496 (72%), Gaps = 2/496 (0%)
Frame = +1
Query: 145 KELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYLQYLG 324
KE F +YN++T++KE F KE GKVGMYVCG+TAYD+SHIGHARA V FD+LYRYL++LG
Sbjct: 3 KEEFRVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHLG 62
Query: 325 YEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRVSDHM 504
YEVTYVRNFTDVDDKII+RANE+GE+P LS RFCQE+L+DMADLQCL PTHQPRVSDH+
Sbjct: 63 YEVTYVRNFTDVDDKIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDHL 122
Query: 505 NEITDMIKQICNNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDGERVE 684
+I DMI QI N Y Y DGDV+FS+D + + Y +LSG+K E++R GERV
Sbjct: 123 EQIKDMITQIIKNGYGYAV-DGDVFFSVDKFPN--------YGQLSGQKLENHRAGERVA 173
Query: 685 VSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGGGMDL 864
V S+K NP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA YLT FDIHGGG+DL
Sbjct: 174 VDSRKNNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDL 233
Query: 865 IFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHPLALR 1044
IFPHHENE QSCAAC + I YWMHNG VT +EKMSKS GNFFTIR IT++YHPL LR
Sbjct: 234 IFPHHENEVAQSCAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLR 293
Query: 1045 YFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEXXXXXXXXXXXXXXXXXXXXXXX 1224
+FL+S HYRSP+N++ QL+ ASD+V+YIYQT+ D E
Sbjct: 294 HFLISAHYRSPLNYTVSQLDSASDTVYYIYQTMQDCE--------------DALSQHQGE 339
Query: 1225 XXXXXXXXNGKVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNTAFLEALRLMN--XX 1398
GK + ++S A+ I L ++F+T+M DDL+T IL AF EAL+ +N
Sbjct: 340 NLSDGLGKTGKKDPVSSAAEECIINLRSEFQTRMADDLNTAHILTGAFQEALKFINSTLT 399
Query: 1399 XXXXXXXXXXXXXXYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTED 1578
SL+ ++KE++ V++ LGLL +TYSEVLQQLK+KAL RAG+ ED
Sbjct: 400 SLKKKQPKKQQLSMIQSLVNVKKELREVLDVLGLLSTSTYSEVLQQLKDKALKRAGMVED 459
Query: 1579 NVLSLIEERVQARKNR 1626
++L LIEER QARK++
Sbjct: 460 DILHLIEERTQARKDK 475
>ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|222864972|gb|EEF02103.1|
predicted protein [Populus trichocarpa]
Length = 532
Score = 579 bits (1493), Expect = e-163
Identities = 295/501 (58%), Positives = 360/501 (71%), Gaps = 2/501 (0%)
Frame = +1
Query: 133 MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 312
MA+ +EL +YN++T++KE F + GKV MYVCGVT+YD+SH+GHARA VAFDIL+RYL
Sbjct: 1 MANNEEL-KLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYL 59
Query: 313 QYLGYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 492
Q+LGYEVTYVRNFTD+DDKII+RANE GEDPL LS RFC+E+L DM DLQCL PTHQPRV
Sbjct: 60 QHLGYEVTYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRV 119
Query: 493 SDHMNEITDMIKQICNNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 672
+DH+ +I DMI QI D AY E GDV+F++ N Y +LSG++ E+NR G
Sbjct: 120 TDHVEQIKDMITQIIEKDCAYAVE-GDVFFAV--------NKSPNYGQLSGQRLENNRAG 170
Query: 673 ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 852
ERV V S+KRNP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA+YLT FDIHGG
Sbjct: 171 ERVAVDSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGG 230
Query: 853 GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 1032
G+DLIFPHHENE QSCAAC + ++ YWMHNG VT +EKMSKS GNFFTIR IT++YHP
Sbjct: 231 GIDLIFPHHENEIAQSCAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 290
Query: 1033 LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEXXXXXXXXXXXXXXXXXXX 1212
LALR+FL+S HYRSP+N+S QLE +SD+VFYIYQTL D E
Sbjct: 291 LALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCE--------------DALLP 336
Query: 1213 XXXXXXXXXXXXNGKVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNTAFLEALRLMN 1392
N + IT++AQ I +LH DF+TKM DDL+T +L AF EAL+++N
Sbjct: 337 FQEGSLKEGAGQNANLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVN 396
Query: 1393 --XXXXXXXXXXXXXXXXYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAG 1566
S+ ++KEV V+ LGL P T +EVLQQLK KAL RAG
Sbjct: 397 GSLGMLKKKQQKKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAG 456
Query: 1567 LTEDNVLSLIEERVQARKNRE 1629
LTED+V+SLIE+R ARK+++
Sbjct: 457 LTEDDVMSLIEDRAVARKSQD 477
>ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase,
putative [Ricinus communis]
Length = 530
Score = 577 bits (1487), Expect = e-162
Identities = 288/498 (57%), Positives = 358/498 (71%), Gaps = 2/498 (0%)
Frame = +1
Query: 142 QKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYLQYL 321
+K F +YNT+ ++ E+F P GKVGMYVCGVTAY +SHIGHARA V FD+L+RYLQ+L
Sbjct: 3 KKVEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHL 62
Query: 322 GYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRVSDH 501
GYEVTY RNFTD+DDKII+RANE+GEDP LS RFC+E+L DM LQCL PTHQPRV+DH
Sbjct: 63 GYEVTYARNFTDIDDKIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDH 122
Query: 502 MNEITDMIKQICNNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDGERV 681
+ +I DMI QI NN +AY +E GDV+F++D + + Y +LSG+K E++R GER
Sbjct: 123 IEQIKDMITQIINNGFAYPSE-GDVFFAVDKFPN--------YGQLSGQKLENHRAGER- 172
Query: 682 EVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGGGMD 861
++KRNP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA+YLT FDIHGGG D
Sbjct: 173 NPDTRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSD 232
Query: 862 LIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHPLAL 1041
LIFPHHENE QS AAC + N+ YW+HNG VT +EKMSKS GN+FTIR++T++YHPLA+
Sbjct: 233 LIFPHHENEITQSAAACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAV 292
Query: 1042 RYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEXXXXXXXXXXXXXXXXXXXXXX 1221
R+FL+S HYRSP+N++ QLE ASD++FYIYQTL D E
Sbjct: 293 RHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCE--------------DALSMFQD 338
Query: 1222 XXXXXXXXXNGKVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNTAFLEALRLMN--X 1395
N KV IT++A+ I+KL +F+TKM DDL T IL AF +AL+ +N
Sbjct: 339 GSLKEGAAQNSKVVGITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSI 398
Query: 1396 XXXXXXXXXXXXXXXYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTE 1575
SL +E+E+K V+N LGLL P TY+E+LQQLK+KAL RAG+TE
Sbjct: 399 SMLKKKLQKPQQLSLIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTE 458
Query: 1576 DNVLSLIEERVQARKNRE 1629
D+VL IEER QARKN+E
Sbjct: 459 DDVLRSIEERAQARKNKE 476