BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004079
         (1998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525006.1| RNA-binding protein with multiple splicing, ...   366   1e-98
ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-...   363   1e-97
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...   359   2e-96
emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]              354   6e-95
gb|AFK46375.1| unknown [Medicago truncatula]                          349   2e-93

>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
           communis] gi|223535714|gb|EEF37378.1| RNA-binding
           protein with multiple splicing, putative [Ricinus
           communis]
          Length = 337

 Score =  366 bits (940), Expect = 1e-98
 Identities = 184/282 (65%), Positives = 212/282 (75%)
 Frame = +1

Query: 58  DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 237
           DE+RTIFI+GLP DVKERELQNLLRWLPGYEASQVN+K E PMGFALFS+S FAIAA++A
Sbjct: 56  DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEA 115

Query: 238 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 417
           LQDM+FDAESK++LHTEMAKKNLFVKRG+VAD N+ DQSKRLRTGGDY+HT         
Sbjct: 116 LQDMLFDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFH 175

Query: 418 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 597
                VWG                                  S Y PVQN+KDNPPCNTL
Sbjct: 176 PPPAPVWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTL 235

Query: 598 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 777
           FIGNLGEN+ E+ELR LFS QPGFKQMK+LRQER+TVCFIEF+D++SA+ VH++LQGAVI
Sbjct: 236 FIGNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVI 295

Query: 778 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 903
           PSSG  GMRIQYSKNPFG+RKDG ++   P ANGAP   T++
Sbjct: 296 PSSGSVGMRIQYSKNPFGKRKDGSHSVASPSANGAPPAMTYQ 337


>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
          Length = 328

 Score =  363 bits (931), Expect = 1e-97
 Identities = 186/282 (65%), Positives = 207/282 (73%)
 Frame = +1

Query: 58  DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 237
           DE+RTIFISGLP DVKERELQNLLRWLPGYEASQVNFK E PMGFALFS+   A+AA+DA
Sbjct: 47  DEVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDA 106

Query: 238 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 417
           LQ+MVFDAESK+VLHTEMAKKNLFVKRG+VAD ++ DQSKRLRTGGDYTHTG        
Sbjct: 107 LQEMVFDAESKSVLHTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFH 166

Query: 418 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 597
                VWG                                  S Y PVQN+KDNPPCNTL
Sbjct: 167 PPPAPVWGPHGYMAPAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTL 226

Query: 598 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 777
           FIGNLGEN+ EEELR LFS QPGFKQMK+LRQER+TVCFIEF+DM++AT VH +LQGAVI
Sbjct: 227 FIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVI 286

Query: 778 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 903
           PSSG  GMRIQYSKNPFG+RKD  +      ANGAP   T++
Sbjct: 287 PSSGSVGMRIQYSKNPFGKRKDSGHPVAVAGANGAPAPPTYQ 328


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
           small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score =  359 bits (921), Expect = 2e-96
 Identities = 183/276 (66%), Positives = 202/276 (73%)
 Frame = +1

Query: 58  DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 237
           DE+RTIFI+GLP DVKERELQNLLRWLPGYEASQVNFK E PMGFALFS++ FAIAA+DA
Sbjct: 54  DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDA 113

Query: 238 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 417
           LQDMVFDAESK+VLHTEMAKKNLFVKRG+VAD +  DQSKRLRTGGDY HTG        
Sbjct: 114 LQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFH 173

Query: 418 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 597
                +WG                                  S Y PVQN+KDNPPCNTL
Sbjct: 174 APPPPIWGPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTL 233

Query: 598 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 777
           FIGNLGENV EEELR LFS QPGFKQMK+LRQER+TVCFIEF+D+++AT VH +LQGAVI
Sbjct: 234 FIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVI 293

Query: 778 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAP 885
           PSSG  GMRIQ+SKNPFG+RKD       P  NG P
Sbjct: 294 PSSGSVGMRIQFSKNPFGKRKDAAYPVSAPGVNGTP 329


>emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
          Length = 284

 Score =  354 bits (908), Expect = 6e-95
 Identities = 182/283 (64%), Positives = 206/283 (72%), Gaps = 1/283 (0%)
 Frame = +1

Query: 58  DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 237
           +E+RTIFI+GLP DVKERE+QNLLRWLPG+EASQ+NFK E PMGFALFSS H AIAA+D 
Sbjct: 2   EEVRTIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMGFALFSSPHQAIAAKDI 61

Query: 238 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 417
           LQDM+FD +SK+VLHTEMAKKNLFVKRG+ AD  + DQSKRLRT GDYTHTG        
Sbjct: 62  LQDMLFDPDSKSVLHTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYTHTGYVTPSPFH 121

Query: 418 XXXXXVWG-HQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNT 594
                VWG H                                 S Y PVQN+KDNPPCNT
Sbjct: 122 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPAPVSIAAPSSYVPVQNTKDNPPCNT 181

Query: 595 LFIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAV 774
           LFIGNLGEN+ EEE+R LFS QPGFKQMK+LRQER+TVCFIEF+D++SAT VH NLQGAV
Sbjct: 182 LFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAV 241

Query: 775 IPSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 903
           IPSSG  GMRIQYSKNPFG+RKDG      P ANGAP+  T++
Sbjct: 242 IPSSGSVGMRIQYSKNPFGKRKDGNFPMAVPGANGAPVALTYQ 284


>gb|AFK46375.1| unknown [Medicago truncatula]
          Length = 314

 Score =  349 bits (895), Expect = 2e-93
 Identities = 176/282 (62%), Positives = 203/282 (71%)
 Frame = +1

Query: 58  DELRTIFISGLPGDVKERELQNLLRWLPGYEASQVNFKVEPPMGFALFSSSHFAIAARDA 237
           +E+RTIFI+GLP DVKERELQNL RWLPG+EASQ+NFK E PMGFALF+S H AIAA+D 
Sbjct: 33  EEVRTIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDI 92

Query: 238 LQDMVFDAESKAVLHTEMAKKNLFVKRGVVADPNSIDQSKRLRTGGDYTHTGXXXXXXXX 417
           LQDM+FD E+K+VLHTEMAKKNLFVKRG+ AD  + DQSKRLRT GDY HTG        
Sbjct: 93  LQDMLFDPEAKSVLHTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYNHTGYVTPSPFH 152

Query: 418 XXXXXVWGHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYAPVQNSKDNPPCNTL 597
                VWG                                  S Y P+QN+KDNPPCNTL
Sbjct: 153 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTL 212

Query: 598 FIGNLGENVIEEELRNLFSGQPGFKQMKLLRQERNTVCFIEFDDMSSATMVHQNLQGAVI 777
           FIGNLGEN+ EEE+R LFS QPGFKQMK++RQER+TVCFIEF+D++SAT VH NLQGAVI
Sbjct: 213 FIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVI 272

Query: 778 PSSGRGGMRIQYSKNPFGRRKDGFNTAGGPEANGAPLQTTFK 903
           PSSG  GMRIQYSKNPFG+R+DG      P ANGAP+  T++
Sbjct: 273 PSSGSIGMRIQYSKNPFGKREDGTYPMAVPGANGAPVAMTYQ 314