BLASTX nr result

ID: Coptis23_contig00004075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004075
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457015.1| hypothetical protein SORBIDRAFT_03g047160 [S...   134   6e-30
ref|XP_002263747.2| PREDICTED: tRNA dimethylallyltransferase 2 [...   134   8e-30
ref|XP_002529084.1| tRNA delta(2)-isopentenylpyrophosphate trans...   133   1e-29
ref|XP_003539178.1| PREDICTED: tRNA dimethylallyltransferase 2-l...   132   2e-29
gb|ACN26882.1| unknown [Zea mays] gi|414878551|tpg|DAA55682.1| T...   132   4e-29

>ref|XP_002457015.1| hypothetical protein SORBIDRAFT_03g047160 [Sorghum bicolor]
           gi|241928990|gb|EES02135.1| hypothetical protein
           SORBIDRAFT_03g047160 [Sorghum bicolor]
          Length = 469

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
 Frame = +1

Query: 4   KENLKTILDCNDSQQKVLLVEAISKLKTNTKXXXXXXXXXXXXXXXXFGWELHYVDASEA 183
           +++   +LD +D Q K LL EA+S+LK NT+                FGW LH+ DA+EA
Sbjct: 306 EDSSANLLDIHDDQLKSLLDEAVSQLKANTRRLVRRQRRRLHRLGKDFGWNLHHFDATEA 365

Query: 184 LLGKSHDSWARKVVEPSIDVVKFNLYEKGCLVSDFKICNSAESQILD-KRDLWTQHICEP 360
               + DSW +KVVEP +DVVK  L +   ++      +     +    R+LWTQ++CE 
Sbjct: 366 FCCATGDSWQKKVVEPCVDVVKRFLSDDSTVLPSTSASDGVVGSVRGPSRELWTQYVCEA 425

Query: 361 CGNRLLRGAHEWEQHKQGRGHRKRILGLRK 450
           C NR+LRGAHEWEQHKQGRGHRKR+  L++
Sbjct: 426 CDNRVLRGAHEWEQHKQGRGHRKRVQRLKQ 455


>ref|XP_002263747.2| PREDICTED: tRNA dimethylallyltransferase 2 [Vitis vinifera]
           gi|297734839|emb|CBI17073.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +1

Query: 1   LKENLKTIL-DCNDSQQKVLLVEAISKLKTNTKXXXXXXXXXXXXXXXXFGWELHYVDAS 177
           LK N++ IL   N+ Q  +LL EAI ++K NT+                FGW++HYVDA+
Sbjct: 300 LKGNVREILKSSNNDQHNILLQEAIERVKANTRRLVRRQKRRFNRLQSLFGWDIHYVDAT 359

Query: 178 EALLGKSHDSWARKVVEPSIDVVKFNLYEKGCLVSDFKICNSAESQILDKRDLWTQHICE 357
           E+       SWA  VVEPS+ +++  L +    + D +  N AE      RDLWTQ+IC+
Sbjct: 360 ESSSCNPSASWAADVVEPSVKIIRSFLRDDASSIPDLEGRNGAEGLKSINRDLWTQYICK 419

Query: 358 PCGNRLLRGAHEWEQHKQGRGHRKRI 435
            CG+R+LRG HEWEQHKQGRGHRKRI
Sbjct: 420 ACGDRVLRGLHEWEQHKQGRGHRKRI 445


>ref|XP_002529084.1| tRNA delta(2)-isopentenylpyrophosphate transferase, putative
           [Ricinus communis] gi|223531496|gb|EEF33328.1| tRNA
           delta(2)-isopentenylpyrophosphate transferase, putative
           [Ricinus communis]
          Length = 453

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
 Frame = +1

Query: 1   LKENLKTIL-DCNDSQQKVLLVEAISKLKTNTKXXXXXXXXXXXXXXXXFGWELHYVDAS 177
           LK N++ IL   +D++ KVLL EAI K+K NT+                FGW +HYVDA+
Sbjct: 290 LKNNMREILRSSDDNEVKVLLTEAIDKVKLNTRRLVRRQKRRITRLNTLFGWNIHYVDAT 349

Query: 178 EALLGKSHDSWARKVVEPSIDVVKFNLYEKGCLVSDFKICNSAESQILDKRDLWTQHICE 357
           E++  KS +SWA  VVEP++++++  L      V   +    A      KR+LWTQ+IC+
Sbjct: 350 ESISCKSDESWAAHVVEPAVEIIRSFLRGDKSSVPVLEASVDAGM----KRNLWTQYICK 405

Query: 358 PCGNRLLRGAHEWEQHKQGRGHRKRILGLRKSK 456
            CG+++LRGAHEWEQHKQGRGHRKR    RK++
Sbjct: 406 ACGDKVLRGAHEWEQHKQGRGHRKRSSRFRKTQ 438


>ref|XP_003539178.1| PREDICTED: tRNA dimethylallyltransferase 2-like [Glycine max]
          Length = 478

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/149 (42%), Positives = 94/149 (63%)
 Frame = +1

Query: 13  LKTILDCNDSQQKVLLVEAISKLKTNTKXXXXXXXXXXXXXXXXFGWELHYVDASEALLG 192
           ++ +   ++++  +LL EAI K+K NT+                FGW +HYVD++E++  
Sbjct: 316 MELVRSSSNTESTILLEEAIEKVKLNTRRLIRRQKRMLSRLQTLFGWNIHYVDSTESISS 375

Query: 193 KSHDSWARKVVEPSIDVVKFNLYEKGCLVSDFKICNSAESQILDKRDLWTQHICEPCGNR 372
           KS D W R+VVE ++ +VK  L E G +   F   N    +I+ +RDLWTQ+IC+ CG+R
Sbjct: 376 KSEDVWTRQVVESAVKIVKSFLSENGTI---FGTSNDTGMKII-QRDLWTQYICKACGDR 431

Query: 373 LLRGAHEWEQHKQGRGHRKRILGLRKSKQ 459
           +LRG HEWEQH+QGRGHRKRI  L++  Q
Sbjct: 432 VLRGFHEWEQHRQGRGHRKRISRLKRKAQ 460


>gb|ACN26882.1| unknown [Zea mays] gi|414878551|tpg|DAA55682.1| TPA: tRNA
           isopentenyltransferase [Zea mays]
          Length = 470

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/144 (45%), Positives = 89/144 (61%)
 Frame = +1

Query: 19  TILDCNDSQQKVLLVEAISKLKTNTKXXXXXXXXXXXXXXXXFGWELHYVDASEALLGKS 198
           ++L  +D Q K LL EA+S+LK NT+                FGW LH VDA+EA    +
Sbjct: 318 SLLGMHDDQLKSLLDEAVSQLKANTRRLVRRQRRRLHRLSKDFGWNLHRVDATEAFFCAT 377

Query: 199 HDSWARKVVEPSIDVVKFNLYEKGCLVSDFKICNSAESQILDKRDLWTQHICEPCGNRLL 378
            DSW +KVV+P +DVV+  L +   ++       S  +     R+LWTQ++CE CGNR+L
Sbjct: 378 DDSWQKKVVKPCVDVVRRFLSDNSTVLP------STSASDPSSRELWTQYVCEACGNRVL 431

Query: 379 RGAHEWEQHKQGRGHRKRILGLRK 450
           RGAHEWEQH+QGRGHRKR+  L++
Sbjct: 432 RGAHEWEQHRQGRGHRKRVQRLKQ 455


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