BLASTX nr result

ID: Coptis23_contig00004071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004071
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF36484.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth...   218   7e-55
gb|AFS28677.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosp...   213   2e-53
gb|ABG23395.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth...   213   2e-53
ref|XP_003611062.1| 2-C-methyl-D-erythritol 2 4-cyclodiphosphate...   211   5e-53
gb|AFS28678.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosp...   210   1e-52

>gb|ADF36484.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Ageratina
           adenophora]
          Length = 231

 Score =  218 bits (554), Expect = 7e-55
 Identities = 108/149 (72%), Positives = 126/149 (84%)
 Frame = -2

Query: 447 FSNNTKLSVKCQSFSSKRSLVMASANAAASTMDIEREKNVKTTPKILPFRVGHGFDLHRL 268
           F+  + +S++    S  R +V+A   AAA+ +++E++   KT  KILPFRVGHGFDLHRL
Sbjct: 34  FTRRSPISLR----SVSRPVVVA---AAANAVEVEKQAVTKTPSKILPFRVGHGFDLHRL 86

Query: 267 ELGYPLIIGGIDIPFEKGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCR 88
           E GYPLIIGGI+IP E+GCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKG  
Sbjct: 87  EPGYPLIIGGINIPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAA 146

Query: 87  SSVFVQEAVRLMHEAGYEIGNLDATLILQ 1
           SSVF++EAVRLMHEAGYE+GNLDATLILQ
Sbjct: 147 SSVFIKEAVRLMHEAGYELGNLDATLILQ 175


>gb|AFS28677.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
           partial [Olea europaea]
          Length = 183

 Score =  213 bits (541), Expect = 2e-53
 Identities = 101/125 (80%), Positives = 112/125 (89%)
 Frame = -2

Query: 375 ANAAASTMDIEREKNVKTTPKILPFRVGHGFDLHRLELGYPLIIGGIDIPFEKGCEAHSD 196
           A AA S ++ E +K+  T  K+LPFRVGHGFDLHRLE GYPLIIGGI+IP ++GCEAHSD
Sbjct: 47  APAATSAVEXETQKSSVTPAKLLPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSD 106

Query: 195 GDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCRSSVFVQEAVRLMHEAGYEIGNLDA 16
           GDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKG  SSVF++EAVRLMHEAGYE+GNLDA
Sbjct: 107 GDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAASSVFIKEAVRLMHEAGYELGNLDA 166

Query: 15  TLILQ 1
           TLILQ
Sbjct: 167 TLILQ 171


>gb|ABG23395.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Stevia
           rebaudiana]
          Length = 231

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/134 (78%), Positives = 116/134 (86%)
 Frame = -2

Query: 402 SKRSLVMASANAAASTMDIEREKNVKTTPKILPFRVGHGFDLHRLELGYPLIIGGIDIPF 223
           S+  +V ASANA    +++E+     T  KILPFRVGHGFDLHRLE GYPLIIGGI+IP 
Sbjct: 46  SRPVVVAASANA----VEVEKPAVTGTPSKILPFRVGHGFDLHRLEPGYPLIIGGINIPH 101

Query: 222 EKGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCRSSVFVQEAVRLMHEA 43
           E+GCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKG  SSVF++EAVRLMHEA
Sbjct: 102 ERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAASSVFIKEAVRLMHEA 161

Query: 42  GYEIGNLDATLILQ 1
           GYE+GNLDATLILQ
Sbjct: 162 GYELGNLDATLILQ 175


>ref|XP_003611062.1| 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase [Medicago
           truncatula] gi|355512397|gb|AES94020.1|
           2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase
           [Medicago truncatula] gi|388499176|gb|AFK37654.1|
           unknown [Medicago truncatula]
          Length = 233

 Score =  211 bits (538), Expect = 5e-53
 Identities = 104/136 (76%), Positives = 118/136 (86%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 SKRSLVMASANAAASTMDIEREKN-VKTTP-KILPFRVGHGFDLHRLELGYPLIIGGIDI 229
           S  SL ++ + AA  T  IE +K+ +  TP ++LPFRVGHGFDLHRLE GYPLIIGGI+I
Sbjct: 42  SSPSLFVSPSGAATPTTSIEIDKSPISATPSRVLPFRVGHGFDLHRLEPGYPLIIGGINI 101

Query: 228 PFEKGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCRSSVFVQEAVRLMH 49
           P ++GCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGC SSVFV E+VRLMH
Sbjct: 102 PHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGCDSSVFVHESVRLMH 161

Query: 48  EAGYEIGNLDATLILQ 1
           EAGY+IGNLDATLILQ
Sbjct: 162 EAGYDIGNLDATLILQ 177


>gb|AFS28678.1| putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
           partial [Olea europaea]
          Length = 183

 Score =  210 bits (535), Expect = 1e-52
 Identities = 99/123 (80%), Positives = 110/123 (89%)
 Frame = -2

Query: 369 AAASTMDIEREKNVKTTPKILPFRVGHGFDLHRLELGYPLIIGGIDIPFEKGCEAHSDGD 190
           AA S ++ E +K+  T  K+LPFRVGHGFDLHRLE GYPLIIGGI+IP ++GCEAHSDGD
Sbjct: 49  AATSAVEXETQKSXVTPAKLLPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGD 108

Query: 189 VLLHCVVDAILGALGLPDIGQIFPDNDPKWKGCRSSVFVQEAVRLMHEAGYEIGNLDATL 10
           VLLHCVVDAILGALGLPDIGQIFPDNDPKWKG  SSVF++EAVRLMHE GYE+GNLDATL
Sbjct: 109 VLLHCVVDAILGALGLPDIGQIFPDNDPKWKGAASSVFIKEAVRLMHEXGYELGNLDATL 168

Query: 9   ILQ 1
           ILQ
Sbjct: 169 ILQ 171


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