BLASTX nr result
ID: Coptis23_contig00004067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004067
(1663 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK95302.1| unknown [Populus trichocarpa] 759 0.0
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co... 757 0.0
ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|2... 757 0.0
ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medi... 751 0.0
ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth... 750 0.0
>gb|ABK95302.1| unknown [Populus trichocarpa]
Length = 498
Score = 759 bits (1960), Expect = 0.0
Identities = 358/492 (72%), Positives = 407/492 (82%)
Frame = -3
Query: 1505 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 1326
ETGL L+ KK+ENFGEWYSEVVV+ EMIEYYDISGCYILRPW MSIWE+MQ FFDAEIKK
Sbjct: 12 ETGLGLSFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEIMQVFFDAEIKK 71
Query: 1325 MKIKNCYFPVFVSESCLQKEKDHIEGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 1146
MKIKNCYFP+FVS S L+KEKDHIEGFA EVAWVT+SGK++L++PIAIRPTSETVMYPYF
Sbjct: 72 MKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETVMYPYF 131
Query: 1145 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 966
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK+EAD+EVL+IL
Sbjct: 132 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKQEADEEVLQIL 191
Query: 965 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 786
ELYRR+YEEFLA+P++KGKKSE EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 192 ELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 251
Query: 785 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXPYK 606
MF+I +ENEKG +GM WQNSWAYSTRTIGVMVMVHGDDKGLVL P+K
Sbjct: 252 MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVSSVQVIVVPVPFK 311
Query: 605 DADMQAIFDACSTTVKTLTEAGFRVEEDLRENYSPGWKYSHWEMKGXXXXXXXXXXXXXX 426
DA+ Q IFDAC+ TV TL EAG R E D RENYSPGWKYSHWEMKG
Sbjct: 312 DANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHWEMKGVPLRIEIGPKDLAN 371
Query: 425 XXXXXXXXXXXXXXNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVAMTWE 246
N++K+DIS +LAEK+ D+L++IQ+S+FDAAK+KRDACI+VA TW+
Sbjct: 372 NQVRAVRRD-----NAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWD 426
Query: 245 EFTTALNEKKLILAPWCDXXXXXXXXXXKTMGENGACKTLCTPFTQPELPEGTLCFASGK 66
EF AL+++K+ILAPWCD +T GE GA K+LC+PF QPELPEG+ CFASGK
Sbjct: 427 EFKEALSQRKMILAPWCDEEEVEKDVKDRTRGEMGAAKSLCSPFDQPELPEGSTCFASGK 486
Query: 65 PAKVWSYWGRSY 30
PAK W+YWGRSY
Sbjct: 487 PAKKWTYWGRSY 498
>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
putative [Ricinus communis]
Length = 501
Score = 757 bits (1954), Expect = 0.0
Identities = 361/492 (73%), Positives = 404/492 (82%)
Frame = -3
Query: 1505 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 1326
ETGL L+ KK+E FGEWYS+VVVS EMIEYYDISGCYILRPW MSIWEVMQTFFDAEIKK
Sbjct: 15 ETGLGLSFKKEEQFGEWYSDVVVSGEMIEYYDISGCYILRPWAMSIWEVMQTFFDAEIKK 74
Query: 1325 MKIKNCYFPVFVSESCLQKEKDHIEGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 1146
MKIKNCYFP+FVS S L+KEKDHIEGFA EVAWVT+SGK++L++PIAIRPTSETVMYPY+
Sbjct: 75 MKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETVMYPYY 134
Query: 1145 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 966
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEAD+EVL+IL
Sbjct: 135 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADEEVLQIL 194
Query: 965 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 786
ELYR +YEEFLAVPVVKGKKSE+EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 195 ELYRCIYEEFLAVPVVKGKKSEREKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 254
Query: 785 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXPYK 606
MF+I +ENEKG +GMVWQNSWAYSTRTIGVMVMVHGDDKGLVL PYK
Sbjct: 255 MFEINFENEKGEKGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYK 314
Query: 605 DADMQAIFDACSTTVKTLTEAGFRVEEDLRENYSPGWKYSHWEMKGXXXXXXXXXXXXXX 426
DAD Q IFDAC+ TV L + G R E D R+NYSPGWKYSHWE+KG
Sbjct: 315 DADTQGIFDACTETVDALCKVGIRAESDFRDNYSPGWKYSHWEVKG-----VPLRIEIGP 369
Query: 425 XXXXXXXXXXXXXXNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVAMTWE 246
N++K DIS +L E++ +IL+ IQQSLFDAAK+KRDACI+V TW+
Sbjct: 370 KDLANNQVRTVRRDNATKKDISRVNLVEQVKEILDAIQQSLFDAAKQKRDACIQVVRTWD 429
Query: 245 EFTTALNEKKLILAPWCDXXXXXXXXXXKTMGENGACKTLCTPFTQPELPEGTLCFASGK 66
EFT AL+++K+ILAPWCD +T GE GA K+LCTPF QPELPEGTLCFASGK
Sbjct: 430 EFTEALSQRKMILAPWCDEEEVEEDVKQRTKGEMGAAKSLCTPFEQPELPEGTLCFASGK 489
Query: 65 PAKVWSYWGRSY 30
PA+ W+YWGRSY
Sbjct: 490 PARKWTYWGRSY 501
>ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|222843279|gb|EEE80826.1|
predicted protein [Populus trichocarpa]
Length = 498
Score = 757 bits (1954), Expect = 0.0
Identities = 359/492 (72%), Positives = 401/492 (81%)
Frame = -3
Query: 1505 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 1326
ETGL LT KK+ENFGEWYSEVVV+ EMIEYYDISGCYILRPW+MSIWE MQ FFD EIKK
Sbjct: 12 ETGLGLTFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMSIWETMQAFFDVEIKK 71
Query: 1325 MKIKNCYFPVFVSESCLQKEKDHIEGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 1146
MKIKNCYFP+FVS S LQKEKDHIEGFA EVAWVT++GK++L++P+AIRPTSETVMYPYF
Sbjct: 72 MKIKNCYFPLFVSSSVLQKEKDHIEGFAPEVAWVTKAGKSDLEVPVAIRPTSETVMYPYF 131
Query: 1145 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 966
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFA+K+EAD+EVL+IL
Sbjct: 132 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFASKQEADEEVLQIL 191
Query: 965 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 786
ELYRR+YEEFLA+PV+KGKKSE EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 192 ELYRRIYEEFLAIPVIKGKKSEMEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 251
Query: 785 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXPYK 606
MF+I +ENEKG +GM WQNSWAYSTRTIGVMVMVHGDDKGLVL PYK
Sbjct: 252 MFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVVPVPYK 311
Query: 605 DADMQAIFDACSTTVKTLTEAGFRVEEDLRENYSPGWKYSHWEMKGXXXXXXXXXXXXXX 426
DAD Q IFDAC+ TV TL EAG R E D RENYSPGWKYSHWEMKG
Sbjct: 312 DADTQGIFDACAATVDTLCEAGIRAEADFRENYSPGWKYSHWEMKG-----VPLRIEIGP 366
Query: 425 XXXXXXXXXXXXXXNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVAMTWE 246
N++K+DIS L EK+ D+L++IQQ LFDAAK+KRDACI+V TW
Sbjct: 367 KDLANNQVRAVRRDNAAKVDISRDSLMEKVKDMLDDIQQRLFDAAKQKRDACIQVVKTWG 426
Query: 245 EFTTALNEKKLILAPWCDXXXXXXXXXXKTMGENGACKTLCTPFTQPELPEGTLCFASGK 66
EF AL+++K+ILAPWCD +T GE GA K+LC+PF QPELPEGT CFASGK
Sbjct: 427 EFKEALSQRKMILAPWCDEEEVERDVKERTRGEMGAAKSLCSPFDQPELPEGTACFASGK 486
Query: 65 PAKVWSYWGRSY 30
PAK W+YWGRSY
Sbjct: 487 PAKKWTYWGRSY 498
>ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
gi|355501082|gb|AES82285.1| Bifunctional aminoacyl-tRNA
synthetase [Medicago truncatula]
Length = 529
Score = 751 bits (1940), Expect = 0.0
Identities = 358/492 (72%), Positives = 397/492 (80%)
Frame = -3
Query: 1505 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 1326
ETGL LT+KK ENFGEWYSEVVV+ EMIEYYDISGCYILRPW+M+IWE+MQ FFD EIKK
Sbjct: 43 ETGLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKK 102
Query: 1325 MKIKNCYFPVFVSESCLQKEKDHIEGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 1146
MKIKNCYFP+FVS + L+KEKDHIEGFA EVAWVT+SG+++L++PIAIRPTSETVMYPY+
Sbjct: 103 MKIKNCYFPLFVSNTVLEKEKDHIEGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYY 162
Query: 1145 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 966
SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEAD EVLEIL
Sbjct: 163 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADTEVLEIL 222
Query: 965 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 786
ELYRR+YEE+LAVPVVKGKKSE EKFAGGLYTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 223 ELYRRIYEEYLAVPVVKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 282
Query: 785 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXPYK 606
MF+I YENEKG + MVWQNSWAYSTRTIGVMVMVHGDDKGLVL PYK
Sbjct: 283 MFEINYENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYK 342
Query: 605 DADMQAIFDACSTTVKTLTEAGFRVEEDLRENYSPGWKYSHWEMKGXXXXXXXXXXXXXX 426
DAD Q IFDAC+ TV L EAG R E D R+NYSPGWKYS WEMKG
Sbjct: 343 DADTQGIFDACTATVNMLLEAGIRAESDARDNYSPGWKYSQWEMKG-----VPLRIEIGP 397
Query: 425 XXXXXXXXXXXXXXNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVAMTWE 246
+ +K+DI DL +I +L+NIQQ+LFD AK KRDACI++ TW+
Sbjct: 398 KDLANKQVRAVRRDSGAKIDIGNDDLVVEIKKLLDNIQQNLFDVAKHKRDACIQIIHTWD 457
Query: 245 EFTTALNEKKLILAPWCDXXXXXXXXXXKTMGENGACKTLCTPFTQPELPEGTLCFASGK 66
EF ALNEKK+ILAPWCD +T GE GA KTLC+PF QPELPEGT+CFASGK
Sbjct: 458 EFVAALNEKKMILAPWCDEEEVEKDVKARTKGETGAAKTLCSPFDQPELPEGTVCFASGK 517
Query: 65 PAKVWSYWGRSY 30
PAK WSYWG+SY
Sbjct: 518 PAKKWSYWGKSY 529
>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
gi|297744088|emb|CBI37058.3| unnamed protein product
[Vitis vinifera]
Length = 516
Score = 750 bits (1936), Expect = 0.0
Identities = 357/492 (72%), Positives = 398/492 (80%)
Frame = -3
Query: 1505 ETGLALTHKKDENFGEWYSEVVVSSEMIEYYDISGCYILRPWTMSIWEVMQTFFDAEIKK 1326
ETGL L++KK+ENFGEWYSEV V+ EMIEYYDISGCYILRPWTM++WE MQTFFDAEIKK
Sbjct: 31 ETGLGLSYKKEENFGEWYSEVCVNGEMIEYYDISGCYILRPWTMAVWETMQTFFDAEIKK 90
Query: 1325 MKIKNCYFPVFVSESCLQKEKDHIEGFAAEVAWVTRSGKTELDLPIAIRPTSETVMYPYF 1146
MKIKNCYFP+FVS LQKEKDHIEGFA EVAWVT+SG+++L++PIAIRPTSETVMYPY+
Sbjct: 91 MKIKNCYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGQSDLEVPIAIRPTSETVMYPYY 150
Query: 1145 SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 966
SKWIRGHRDLPLRLNQWCNVVRWEFS+PTPFIRSREFLWQEGHTAFATKEEADKEVLEIL
Sbjct: 151 SKWIRGHRDLPLRLNQWCNVVRWEFSHPTPFIRSREFLWQEGHTAFATKEEADKEVLEIL 210
Query: 965 ELYRRVYEEFLAVPVVKGKKSEKEKFAGGLYTTSVEAFVPNTGRGVQGATSHCLGQNFAK 786
ELYRR+YEE+LA+PV+KGKKSE EKFAGG YTTSVEAF+PNTGRG+QGATSHCLGQNFAK
Sbjct: 211 ELYRRIYEEYLAIPVIKGKKSEMEKFAGGFYTTSVEAFIPNTGRGIQGATSHCLGQNFAK 270
Query: 785 MFDIQYENEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDKGLVLXXXXXXXXXXXXXXPYK 606
MFDI +ENEKG + MVWQNSWAYSTRTIGVMVMVHGDDKGLV+ P+K
Sbjct: 271 MFDITFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVMPPKVASVQIIVVPVPFK 330
Query: 605 DADMQAIFDACSTTVKTLTEAGFRVEEDLRENYSPGWKYSHWEMKGXXXXXXXXXXXXXX 426
DAD QAIFDAC TV TL EAGFR E DLR+NYSPGWKYSHWEMKG
Sbjct: 331 DADTQAIFDACDATVNTLNEAGFRAEADLRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAN 390
Query: 425 XXXXXXXXXXXXXXNSSKMDISTGDLAEKIGDILENIQQSLFDAAKEKRDACIKVAMTWE 246
NS+K+DI +L E++ D+L+NIQQ+LFD AK+KRDACIK TW+
Sbjct: 391 KQARAVRRD-----NSAKIDIPIVNLVEQVKDMLDNIQQNLFDVAKQKRDACIKTVRTWD 445
Query: 245 EFTTALNEKKLILAPWCDXXXXXXXXXXKTMGENGACKTLCTPFTQPELPEGTLCFASGK 66
EF AL +KK+ILAPWCD +T GE GA KTLC PF QP+L EG CF +GK
Sbjct: 446 EFIEALGQKKMILAPWCDEMEVEKDVKARTKGETGAAKTLCAPFDQPDL-EGVNCFVTGK 504
Query: 65 PAKVWSYWGRSY 30
PAK WSYWGRSY
Sbjct: 505 PAKKWSYWGRSY 516