BLASTX nr result

ID: Coptis23_contig00004064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004064
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27628.3| unnamed protein product [Vitis vinifera]              128   7e-28
gb|AFK33861.1| unknown [Medicago truncatula]                          121   7e-26
ref|XP_002279312.1| PREDICTED: probable signal peptidase complex...   120   2e-25
ref|XP_004159684.1| PREDICTED: LOW QUALITY PROTEIN: probable sig...   118   6e-25
ref|XP_003551412.1| PREDICTED: probable signal peptidase complex...   118   6e-25

>emb|CBI27628.3| unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  128 bits (321), Expect = 7e-28
 Identities = 60/83 (72%), Positives = 69/83 (83%)
 Frame = -1

Query: 516 NFLNQKKKKQMDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTL 337
           NFL +K+   MDWQGQKLAEQLMQ LL++FAVVAF  GY +GSFQMML +YA GV LTTL
Sbjct: 5   NFLREKENTIMDWQGQKLAEQLMQTLLLAFAVVAFVAGYSLGSFQMMLLIYAGGVALTTL 64

Query: 336 ITVPNWPFFNYHPLKWLESIDAE 268
           ITVPNWPFFN HPLKWL+S + +
Sbjct: 65  ITVPNWPFFNRHPLKWLDSSEVD 87


>gb|AFK33861.1| unknown [Medicago truncatula]
          Length = 93

 Score =  121 bits (304), Expect = 7e-26
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = -1

Query: 486 MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 307
           MDW+GQKLAEQLMQILL++FAV+AFG GY   SFQ M+ +YA GVILTTL+T+PNWPFFN
Sbjct: 1   MDWEGQKLAEQLMQILLLAFAVIAFGAGYITASFQTMILIYAGGVILTTLVTIPNWPFFN 60

Query: 306 YHPLKWLESIDAE 268
           +HPLKWL+  +AE
Sbjct: 61  HHPLKWLDPSEAE 73


>ref|XP_002279312.1| PREDICTED: probable signal peptidase complex subunit 1-like [Vitis
           vinifera]
          Length = 91

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/73 (76%), Positives = 63/73 (86%)
 Frame = -1

Query: 486 MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 307
           MDWQGQKLAEQLMQ LL++FAVVAF  GY +GSFQMML +YA GV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQTLLLAFAVVAFVAGYSLGSFQMMLLIYAGGVALTTLITVPNWPFFN 60

Query: 306 YHPLKWLESIDAE 268
            HPLKWL+S + +
Sbjct: 61  RHPLKWLDSSEVD 73


>ref|XP_004159684.1| PREDICTED: LOW QUALITY PROTEIN: probable signal peptidase complex
           subunit 1-like [Cucumis sativus]
          Length = 93

 Score =  118 bits (296), Expect = 6e-25
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = -1

Query: 486 MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 307
           MDWQGQKLAEQLMQ++LV+FAVVAF  GY +GSF++M+ VYA GV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQLMLVAFAVVAFXTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 60

Query: 306 YHPLKWLESIDAE 268
            HPLKWL+   AE
Sbjct: 61  RHPLKWLDPSLAE 73


>ref|XP_003551412.1| PREDICTED: probable signal peptidase complex subunit 1-like
           [Glycine max] gi|356566386|ref|XP_003551413.1|
           PREDICTED: probable signal peptidase complex subunit
           1-like [Glycine max]
          Length = 93

 Score =  118 bits (296), Expect = 6e-25
 Identities = 50/73 (68%), Positives = 63/73 (86%)
 Frame = -1

Query: 486 MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 307
           MDWQGQK+AEQLMQI+L++F V+AF  GY + SFQMM+ +YA GV+LTTL+TVPNWPFFN
Sbjct: 1   MDWQGQKIAEQLMQIMLLAFTVIAFATGYLMASFQMMILIYAGGVVLTTLVTVPNWPFFN 60

Query: 306 YHPLKWLESIDAE 268
           +HPLKWL+  + E
Sbjct: 61  HHPLKWLDPSELE 73


Top