BLASTX nr result

ID: Coptis23_contig00004062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004062
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004141410.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10...    73   6e-11
ref|XP_002285423.2| PREDICTED: uncharacterized protein LOC100250...    71   3e-10
emb|CBI19373.3| unnamed protein product [Vitis vinifera]               71   3e-10
ref|XP_003524029.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10...    70   4e-10

>ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|222861451|gb|EEE98993.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/55 (60%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   MLDGLKISAKVVHEEVVERGMDVLRYITAKSAAIVTICFALCLHVVGGSRILMPA 167
           M DG+K S  VV EE+V+RG++V+RY+ AKS+ IVT+C AL LHV+GG+R+L+PA
Sbjct: 358 MSDGVKRSLNVVQEEIVDRGLEVVRYVGAKSSVIVTVCLALYLHVLGGTRVLLPA 412


>ref|XP_004141410.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10-like [Cucumis sativus]
           gi|449517421|ref|XP_004165744.1| PREDICTED: protein
           PHLOEM PROTEIN 2-LIKE A10-like [Cucumis sativus]
          Length = 422

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = +3

Query: 3   MLDGLKISAKVVHEEVVERGMDVLRYITAKSAAIVTICFALCLHVVGGSRILMPA 167
           ++DGLK S   VH+EVV RG++V+RY  AKS+ IVTIC AL LHV GG+R+L+PA
Sbjct: 368 LMDGLKRSLDTVHDEVVGRGLEVIRYFCAKSSVIVTICLALYLHVFGGTRLLVPA 422


>ref|XP_002285423.2| PREDICTED: uncharacterized protein LOC100250545 [Vitis vinifera]
          Length = 842

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = +3

Query: 3   MLDGLKISAKVVHEEVVERGMDVLRYITAKSAAIVTICFALCLHVVGGSRILMPA 167
           + DGLK S  V HEEVV+RG++V+RY+ AKS+ IVTIC AL LH++GG+ +L+ A
Sbjct: 788 LADGLKRSLNVAHEEVVDRGLEVIRYVGAKSSVIVTICLALYLHILGGTGVLLHA 842


>emb|CBI19373.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = +3

Query: 3   MLDGLKISAKVVHEEVVERGMDVLRYITAKSAAIVTICFALCLHVVGGSRILMPA 167
           + DGLK S  V HEEVV+RG++V+RY+ AKS+ IVTIC AL LH++GG+ +L+ A
Sbjct: 221 LADGLKRSLNVAHEEVVDRGLEVIRYVGAKSSVIVTICLALYLHILGGTGVLLHA 275


>ref|XP_003524029.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10-like [Glycine max]
          Length = 415

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 31/53 (58%), Positives = 43/53 (81%)
 Frame = +3

Query: 9   DGLKISAKVVHEEVVERGMDVLRYITAKSAAIVTICFALCLHVVGGSRILMPA 167
           DG K S   VHEEV+ +G++V+RY+ AKS+ I+T+C AL LH++GGSRIL+PA
Sbjct: 363 DGFKSSVSKVHEEVLGKGLEVVRYVGAKSSVILTLCLALYLHIMGGSRILLPA 415


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