BLASTX nr result

ID: Coptis23_contig00004061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004061
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303893.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
ref|XP_002285503.1| PREDICTED: ADP,ATP carrier protein, mitochon...    75   3e-11
ref|XP_002299232.1| predicted protein [Populus trichocarpa] gi|2...    74   5e-11
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-10
ref|XP_002513476.1| ADP,ATP carrier protein, putative [Ricinus c...    72   2e-10

>ref|XP_002303893.1| predicted protein [Populus trichocarpa] gi|222841325|gb|EEE78872.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = +1

Query: 709 AGGQYRNGGLRYPGMQQPCRTSLDLSSVTSYTSPVFVQAPSEKGFANFALDFLMGGVSAA 888
           A G Y N G +Y  M +PC++S D+S V S T+PVFVQAPSEKG A FA+DFLMGGVSAA
Sbjct: 39  AYGNYSNAGFQY-AMTRPCQSSPDMSLVASSTAPVFVQAPSEKGLAGFAVDFLMGGVSAA 97


>ref|XP_002285503.1| PREDICTED: ADP,ATP carrier protein, mitochondrial-like [Vitis
           vinifera]
          Length = 393

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 709 AGGQYRNGGLRYPGMQQPCRTSLDLSSVTSYTSPVFVQAPSEKGFANFALDFLMGGVSAA 888
           A G Y N  L+YP M Q C+ + DLS + S  SPVFVQAP EKGFA+FA+DFLMGGVSAA
Sbjct: 46  AFGNYSNVVLQYP-MTQSCQATQDLSLIASTASPVFVQAPQEKGFASFAVDFLMGGVSAA 104


>ref|XP_002299232.1| predicted protein [Populus trichocarpa] gi|222846490|gb|EEE84037.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 37/60 (61%), Positives = 45/60 (75%)
 Frame = +1

Query: 709 AGGQYRNGGLRYPGMQQPCRTSLDLSSVTSYTSPVFVQAPSEKGFANFALDFLMGGVSAA 888
           A G Y N G +Y  M + C+++ D+S + S TSPVFVQAPSEKG A FA+DFLMGGVSAA
Sbjct: 39  AYGNYSNAGFQY-AMTRACQSTPDMSLIASSTSPVFVQAPSEKGLAGFAIDFLMGGVSAA 97


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score = 56.6 bits (135), Expect(2) = 1e-10
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = +3

Query: 18  KSMNEV*SVCVSALALCGQMSDGLELYEEIKQVGCHLEPNAVIS 149
           K +NE+ SV VSALA  GQM+D L LYEE+KQ G +LEP AVIS
Sbjct: 536 KHLNEIRSVLVSALASHGQMTDALNLYEEMKQAGSNLEPKAVIS 579



 Score = 36.2 bits (82), Expect(2) = 1e-10
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 157 IEHLQYEGDLNTXXXXXXXXXDPDFWFDGCERVVGYCI 270
           IEH+  EG+ +          D ++W DGC RV+ YCI
Sbjct: 581 IEHVDSEGEQSRLLKLLEELDDHNYWVDGCFRVILYCI 618


>ref|XP_002513476.1| ADP,ATP carrier protein, putative [Ricinus communis]
           gi|223547384|gb|EEF48879.1| ADP,ATP carrier protein,
           putative [Ricinus communis]
          Length = 392

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = +1

Query: 715 GQYRNGGLRYPGMQQPCRTSLDLSSVTSYTSPVFVQAPSEKGFANFALDFLMGGVSAA 888
           G Y N   +YP M + C  S DL  + S  SPVFVQAPSEKGFA+FA DFLMGGVSAA
Sbjct: 48  GNYCNAAFQYP-MTRACEASPDLPLIASTASPVFVQAPSEKGFASFATDFLMGGVSAA 104


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