BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004057
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]        67   1e-09
ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|1...    67   1e-09
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...    64   1e-08
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...    64   1e-08
emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]    64   1e-08

>gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]
          Length = 151

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/49 (65%), Positives = 32/49 (65%)
 Frame = -1

Query: 192 IGFPQPVPPPGVTAAXXXXXXXXXYGYQAVPVYAVVEGRPVREPRLPCC 46
           IGFPQPVPPPG T           Y YQ VP YAV EGRPVRE RLPCC
Sbjct: 39  IGFPQPVPPPGATEPSSPLPPYYAYAYQTVPGYAVAEGRPVRERRLPCC 87


>ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|118486768|gb|ABK95219.1|
           unknown [Populus trichocarpa]
           gi|222846181|gb|EEE83728.1| predicted protein [Populus
           trichocarpa]
          Length = 156

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = -1

Query: 192 IGFPQPVPPPGVTAAXXXXXXXXXYGYQAVPVYAVVEGRPVREPRLPCC 46
           IGFPQPVPPPG+TA           GYQ VP YAV EGRPVR+ RLPCC
Sbjct: 49  IGFPQPVPPPGITAEPYAQ------GYQTVPGYAVAEGRPVRQRRLPCC 91


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/49 (63%), Positives = 32/49 (65%)
 Frame = -1

Query: 192 IGFPQPVPPPGVTAAXXXXXXXXXYGYQAVPVYAVVEGRPVREPRLPCC 46
           IGFPQPVPPPG +            GYQ VP YAV EGRPVRE RLPCC
Sbjct: 58  IGFPQPVPPPGASEPPAYPH-----GYQTVPGYAVAEGRPVRERRLPCC 101


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = -1

Query: 195 SIGFPQPVPPPGV---TAAXXXXXXXXXYGYQAVPVYAVVEGRPVREPRLPCC 46
           ++GFPQPVPPPG    +A          +GYQAVP YAV EG PVRE RLPCC
Sbjct: 27  AVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGTPVRERRLPCC 79


>emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]
          Length = 141

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = -1

Query: 195 SIGFPQPVPPPGV---TAAXXXXXXXXXYGYQAVPVYAVVEGRPVREPRLPCC 46
           ++GFPQPVPPPG    +A          +GYQAVP YAV EG PVRE RLPCC
Sbjct: 27  AVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGTPVRERRLPCC 79