BLASTX nr result
ID: Coptis23_contig00004055
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004055
(609 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518113.1| WD-repeat protein, putative [Ricinus communi... 189 3e-72
ref|XP_002303828.1| predicted protein [Populus trichocarpa] gi|2... 184 3e-70
ref|XP_002299273.1| predicted protein [Populus trichocarpa] gi|2... 184 8e-70
ref|XP_003607636.1| Transcriptional corepressor LEUNIG [Medicago... 177 5e-69
ref|XP_003590232.1| Transcriptional corepressor LEUNIG [Medicago... 177 5e-69
>ref|XP_002518113.1| WD-repeat protein, putative [Ricinus communis]
gi|223542709|gb|EEF44246.1| WD-repeat protein, putative
[Ricinus communis]
Length = 782
Score = 189 bits (481), Expect(2) = 3e-72
Identities = 87/107 (81%), Positives = 99/107 (92%)
Frame = +1
Query: 1 CDSGGEIRFWNISQSSCSRVSKGGSAQVRFQPRTGQLLAAAAENIVSIFDVETDRQTHAL 180
CD EIRFWNI+Q SC+R+SKGG AQVRFQPR G LLAAAAEN+VSIFDVETDRQTH+L
Sbjct: 609 CDGNNEIRFWNINQYSCTRISKGGIAQVRFQPRIGHLLAAAAENVVSIFDVETDRQTHSL 668
Query: 181 QGHTKELHSVCWDVNGEYLASVSEDSVRVWSLASGECIHELNSNGNK 321
QGH+ E+HSVCWDVNG+YLASVS++SVRVWSLASGECIHEL+S+GNK
Sbjct: 669 QGHSTEVHSVCWDVNGDYLASVSQESVRVWSLASGECIHELSSSGNK 715
Score = 108 bits (269), Expect(2) = 3e-72
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +2
Query: 419 FHPSYSTLLVIGGYQTMELWNMAENKSMTVQAHDGQIAALAQSPATGMVASASHDKSVKL 598
FHPSYSTLLVIGGYQ++ELWNMAENK MT+ AH+ I+ALAQSP TGMVASASHDK VK+
Sbjct: 721 FHPSYSTLLVIGGYQSLELWNMAENKCMTIPAHECVISALAQSPVTGMVASASHDKCVKI 780
Query: 599 WK 604
WK
Sbjct: 781 WK 782
>ref|XP_002303828.1| predicted protein [Populus trichocarpa] gi|222841260|gb|EEE78807.1|
predicted protein [Populus trichocarpa]
Length = 782
Score = 184 bits (467), Expect(2) = 3e-70
Identities = 83/107 (77%), Positives = 98/107 (91%)
Frame = +1
Query: 1 CDSGGEIRFWNISQSSCSRVSKGGSAQVRFQPRTGQLLAAAAENIVSIFDVETDRQTHAL 180
CD EIRFWNI+Q SC+R+SKGG+ QVRFQPR GQLLAAAAEN+VSIFDVE DRQTH+L
Sbjct: 609 CDDNNEIRFWNINQYSCTRISKGGTTQVRFQPRIGQLLAAAAENVVSIFDVEADRQTHSL 668
Query: 181 QGHTKELHSVCWDVNGEYLASVSEDSVRVWSLASGECIHELNSNGNK 321
+GH+ +HSVCWDVNG+YLASVS++SVRVWSLA+GECIHEL+S+GNK
Sbjct: 669 RGHSTAVHSVCWDVNGDYLASVSQESVRVWSLATGECIHELSSSGNK 715
Score = 107 bits (266), Expect(2) = 3e-70
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +2
Query: 419 FHPSYSTLLVIGGYQTMELWNMAENKSMTVQAHDGQIAALAQSPATGMVASASHDKSVKL 598
FHPSYSTLLVIGGYQ++ELWNMAENK MTV AH+ I+ALAQS ATGMVASASHDK VK+
Sbjct: 721 FHPSYSTLLVIGGYQSLELWNMAENKCMTVAAHECVISALAQSQATGMVASASHDKCVKI 780
Query: 599 WK 604
WK
Sbjct: 781 WK 782
>ref|XP_002299273.1| predicted protein [Populus trichocarpa] gi|222846531|gb|EEE84078.1|
predicted protein [Populus trichocarpa]
Length = 773
Score = 184 bits (466), Expect(2) = 8e-70
Identities = 81/107 (75%), Positives = 99/107 (92%)
Frame = +1
Query: 1 CDSGGEIRFWNISQSSCSRVSKGGSAQVRFQPRTGQLLAAAAENIVSIFDVETDRQTHAL 180
CD EIRFWNI+Q C+R+SKGG+ QVRFQPR GQLLAAA++N+VSIFD+E+DRQTH+L
Sbjct: 600 CDGNNEIRFWNINQYPCTRISKGGTTQVRFQPRIGQLLAAASDNVVSIFDIESDRQTHSL 659
Query: 181 QGHTKELHSVCWDVNGEYLASVSEDSVRVWSLASGECIHELNSNGNK 321
QGH+ E+HSVCWDVNGEYLASVS++SVRVWSLA+G+CIHEL+S+GNK
Sbjct: 660 QGHSTEVHSVCWDVNGEYLASVSQESVRVWSLATGDCIHELSSSGNK 706
Score = 105 bits (263), Expect(2) = 8e-70
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +2
Query: 419 FHPSYSTLLVIGGYQTMELWNMAENKSMTVQAHDGQIAALAQSPATGMVASASHDKSVKL 598
FHPSY+TLLVIGGYQ++ELWNMAENK MTV AH+ I+ALAQS ATGMVASASHDK VK+
Sbjct: 712 FHPSYATLLVIGGYQSLELWNMAENKCMTVAAHECVISALAQSQATGMVASASHDKCVKI 771
Query: 599 WK 604
WK
Sbjct: 772 WK 773
>ref|XP_003607636.1| Transcriptional corepressor LEUNIG [Medicago truncatula]
gi|355508691|gb|AES89833.1| Transcriptional corepressor
LEUNIG [Medicago truncatula]
Length = 787
Score = 177 bits (449), Expect(2) = 5e-69
Identities = 80/106 (75%), Positives = 94/106 (88%)
Frame = +1
Query: 1 CDSGGEIRFWNISQSSCSRVSKGGSAQVRFQPRTGQLLAAAAENIVSIFDVETDRQTHAL 180
CD EIRFWNISQ SC+RV KGGS QVRFQPR+G LLAAA+ N+VS+FDVETDRQ H+L
Sbjct: 614 CDDNNEIRFWNISQYSCTRVFKGGSTQVRFQPRSGHLLAAASGNVVSLFDVETDRQMHSL 673
Query: 181 QGHTKELHSVCWDVNGEYLASVSEDSVRVWSLASGECIHELNSNGN 318
QGH+ E+H VCWD NG+YLASVS++SV+VWSLASG+CIHELNS+GN
Sbjct: 674 QGHSGEVHCVCWDTNGDYLASVSQESVKVWSLASGDCIHELNSSGN 719
Score = 109 bits (273), Expect(2) = 5e-69
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = +2
Query: 419 FHPSYSTLLVIGGYQTMELWNMAENKSMTVQAHDGQIAALAQSPATGMVASASHDKSVKL 598
FHPSYS LLVIGGYQ++ELW+MAENK MT+ AH+G I+ALAQSP TGMVASASHDKSVK+
Sbjct: 726 FHPSYSNLLVIGGYQSLELWHMAENKCMTIPAHEGVISALAQSPVTGMVASASHDKSVKI 785
Query: 599 WK 604
WK
Sbjct: 786 WK 787
>ref|XP_003590232.1| Transcriptional corepressor LEUNIG [Medicago truncatula]
gi|355479280|gb|AES60483.1| Transcriptional corepressor
LEUNIG [Medicago truncatula]
Length = 786
Score = 177 bits (449), Expect(2) = 5e-69
Identities = 80/106 (75%), Positives = 94/106 (88%)
Frame = +1
Query: 1 CDSGGEIRFWNISQSSCSRVSKGGSAQVRFQPRTGQLLAAAAENIVSIFDVETDRQTHAL 180
CD EIRFWNISQ SC+RV KGGS QVRFQPR+G LLAAA+ N+VS+FDVETDRQ H+L
Sbjct: 613 CDDNNEIRFWNISQYSCTRVFKGGSTQVRFQPRSGHLLAAASGNVVSLFDVETDRQMHSL 672
Query: 181 QGHTKELHSVCWDVNGEYLASVSEDSVRVWSLASGECIHELNSNGN 318
QGH+ E+H VCWD NG+YLASVS++SV+VWSLASG+CIHELNS+GN
Sbjct: 673 QGHSGEVHCVCWDTNGDYLASVSQESVKVWSLASGDCIHELNSSGN 718
Score = 109 bits (273), Expect(2) = 5e-69
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = +2
Query: 419 FHPSYSTLLVIGGYQTMELWNMAENKSMTVQAHDGQIAALAQSPATGMVASASHDKSVKL 598
FHPSYS LLVIGGYQ++ELW+MAENK MT+ AH+G I+ALAQSP TGMVASASHDKSVK+
Sbjct: 725 FHPSYSNLLVIGGYQSLELWHMAENKCMTIPAHEGVISALAQSPVTGMVASASHDKSVKI 784
Query: 599 WK 604
WK
Sbjct: 785 WK 786