BLASTX nr result

ID: Coptis23_contig00004040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004040
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-56
emb|CAN72066.1| hypothetical protein VITISV_042589 [Vitis vinifera]   153   8e-56
ref|XP_002284173.1| PREDICTED: coiled-coil domain-containing pro...   153   1e-55
emb|CBI20890.3| unnamed protein product [Vitis vinifera]              153   1e-55
ref|XP_002516569.1| Coiled-coil domain-containing protein, putat...   150   6e-55

>ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|222855535|gb|EEE93082.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  152 bits (385), Expect(2) = 4e-56
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +3

Query: 204 VNRLNKTKVERTPDLKAEREAVGAAERSEKKLLMRDKKRREEMDRLEKERQAEMRSYKGL 383
           VNRLNKTKVER PDLKAEREAV AAER+E+KL +RDKKRREEM+RLEKERQAEMRSYKGL
Sbjct: 129 VNRLNKTKVERKPDLKAEREAVNAAERAERKLHLRDKKRREEMERLEKERQAEMRSYKGL 188

Query: 384 MVSEKMTSNKQIASANKSLQELEDDFM 464
           MV+EKMTSNKQIAS NKSLQELEDDFM
Sbjct: 189 MVAEKMTSNKQIASENKSLQELEDDFM 215



 Score = 90.5 bits (223), Expect(2) = 4e-56
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +1

Query: 1   IVYTPWYNLKKAASMDVGQVGFHNSKMVRTVRVEKRVNEIVNRLNK 138
           +VYTPW NLKK ASMDVGQVGFHNSKMVRTVRVEKR+NEIVNRLNK
Sbjct: 89  VVYTPWANLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNK 134


>emb|CAN72066.1| hypothetical protein VITISV_042589 [Vitis vinifera]
          Length = 199

 Score =  153 bits (387), Expect(2) = 8e-56
 Identities = 78/87 (89%), Positives = 84/87 (96%)
 Frame = +3

Query: 204 VNRLNKTKVERTPDLKAEREAVGAAERSEKKLLMRDKKRREEMDRLEKERQAEMRSYKGL 383
           VNRLN+TKVER PDLKAEREAV AAER+E+KL +RDKKRREEM+RLEKERQAE+RSYKGL
Sbjct: 113 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQAEIRSYKGL 172

Query: 384 MVSEKMTSNKQIASANKSLQELEDDFM 464
           MVSEKMTSNKQIASANKSLQELEDDFM
Sbjct: 173 MVSEKMTSNKQIASANKSLQELEDDFM 199



 Score = 89.0 bits (219), Expect(2) = 8e-56
 Identities = 40/46 (86%), Positives = 46/46 (100%)
 Frame = +1

Query: 1   IVYTPWYNLKKAASMDVGQVGFHNSKMVRTVRVEKRVNEIVNRLNK 138
           +VYTPW+NLKK+ASMDVGQVGF+NSKMVRTVRVEKR+NEIVNRLN+
Sbjct: 73  VVYTPWHNLKKSASMDVGQVGFYNSKMVRTVRVEKRINEIVNRLNR 118


>ref|XP_002284173.1| PREDICTED: coiled-coil domain-containing protein 25-like [Vitis
           vinifera]
          Length = 215

 Score =  153 bits (387), Expect(2) = 1e-55
 Identities = 78/87 (89%), Positives = 84/87 (96%)
 Frame = +3

Query: 204 VNRLNKTKVERTPDLKAEREAVGAAERSEKKLLMRDKKRREEMDRLEKERQAEMRSYKGL 383
           VNRLN+TKVER PDLKAEREAV AAER+E+KL +RDKKRREEM+RLEKERQAE+RSYKGL
Sbjct: 129 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQAEIRSYKGL 188

Query: 384 MVSEKMTSNKQIASANKSLQELEDDFM 464
           MVSEKMTSNKQIASANKSLQELEDDFM
Sbjct: 189 MVSEKMTSNKQIASANKSLQELEDDFM 215



 Score = 88.6 bits (218), Expect(2) = 1e-55
 Identities = 40/46 (86%), Positives = 45/46 (97%)
 Frame = +1

Query: 1   IVYTPWYNLKKAASMDVGQVGFHNSKMVRTVRVEKRVNEIVNRLNK 138
           +VYTPW+NLKK ASMDVGQVGF+NSKMVRTVRVEKR+NEIVNRLN+
Sbjct: 89  VVYTPWHNLKKTASMDVGQVGFYNSKMVRTVRVEKRINEIVNRLNR 134


>emb|CBI20890.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  153 bits (387), Expect(2) = 1e-55
 Identities = 78/87 (89%), Positives = 84/87 (96%)
 Frame = +3

Query: 204 VNRLNKTKVERTPDLKAEREAVGAAERSEKKLLMRDKKRREEMDRLEKERQAEMRSYKGL 383
           VNRLN+TKVER PDLKAEREAV AAER+E+KL +RDKKRREEM+RLEKERQAE+RSYKGL
Sbjct: 112 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQAEIRSYKGL 171

Query: 384 MVSEKMTSNKQIASANKSLQELEDDFM 464
           MVSEKMTSNKQIASANKSLQELEDDFM
Sbjct: 172 MVSEKMTSNKQIASANKSLQELEDDFM 198



 Score = 88.6 bits (218), Expect(2) = 1e-55
 Identities = 40/46 (86%), Positives = 45/46 (97%)
 Frame = +1

Query: 1   IVYTPWYNLKKAASMDVGQVGFHNSKMVRTVRVEKRVNEIVNRLNK 138
           +VYTPW+NLKK ASMDVGQVGF+NSKMVRTVRVEKR+NEIVNRLN+
Sbjct: 72  VVYTPWHNLKKTASMDVGQVGFYNSKMVRTVRVEKRINEIVNRLNR 117


>ref|XP_002516569.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223544389|gb|EEF45910.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 215

 Score =  150 bits (378), Expect(2) = 6e-55
 Identities = 76/87 (87%), Positives = 83/87 (95%)
 Frame = +3

Query: 204 VNRLNKTKVERTPDLKAEREAVGAAERSEKKLLMRDKKRREEMDRLEKERQAEMRSYKGL 383
           VNRLN+TKVER PDLKAEREAV AAER+E+KL +RDKKRREEM+RLEKERQAE+RSYKGL
Sbjct: 129 VNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQAEIRSYKGL 188

Query: 384 MVSEKMTSNKQIASANKSLQELEDDFM 464
           MVSEKMTSNKQIAS NKSLQELE+DFM
Sbjct: 189 MVSEKMTSNKQIASENKSLQELEEDFM 215



 Score = 89.4 bits (220), Expect(2) = 6e-55
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +1

Query: 1   IVYTPWYNLKKAASMDVGQVGFHNSKMVRTVRVEKRVNEIVNRLNK 138
           +VYTPW NLKK ASMDVGQVGFHNSKMVRTVRVEKR+NEIVNRLN+
Sbjct: 89  VVYTPWANLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNR 134


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