BLASTX nr result
ID: Coptis23_contig00004023
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004023 (851 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ... 144 3e-32 ref|XP_002305996.1| high mobility group family [Populus trichoca... 141 2e-31 ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-... 140 3e-31 ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus... 140 4e-31 ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-... 139 1e-30 >ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera] gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera] Length = 175 Score = 144 bits (363), Expect = 3e-32 Identities = 65/80 (81%), Positives = 73/80 (91%) Frame = +2 Query: 257 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 436 D KPKKPPTAFFY+LEDFR +QEQNPDVKSMRD+GKACGEKWKTMTYEEKV+YYDIAT Sbjct: 84 DSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 143 Query: 437 EKRKEFEQAMADYERRKERG 496 EKR EF++AMADY +R+E G Sbjct: 144 EKRAEFDRAMADYIKRQESG 163 >ref|XP_002305996.1| high mobility group family [Populus trichocarpa] gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa] Length = 165 Score = 141 bits (356), Expect = 2e-31 Identities = 65/82 (79%), Positives = 73/82 (89%) Frame = +2 Query: 251 KEDKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDI 430 K D KPKKPPTAFFY+LEDFR +QEQNPDVKSMR+VGKACGEKWKTMTYEEKVKYYDI Sbjct: 71 KFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDI 130 Query: 431 ATEKRKEFEQAMADYERRKERG 496 ATEKR EF++A ++Y +RKE G Sbjct: 131 ATEKRAEFDRATSEYIKRKESG 152 >ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus] gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus] Length = 161 Score = 140 bits (354), Expect = 3e-31 Identities = 63/82 (76%), Positives = 74/82 (90%) Frame = +2 Query: 251 KEDKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDI 430 K D +KPKKPPTAFFY+L+DFR +QEQNPDVK+MRDVGKACGEKWKTMTYEEKV+YYDI Sbjct: 67 KFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDI 126 Query: 431 ATEKRKEFEQAMADYERRKERG 496 ATEKR EF++AM +Y++R E G Sbjct: 127 ATEKRAEFDKAMTEYKKRMESG 148 >ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis] gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis] Length = 198 Score = 140 bits (353), Expect = 4e-31 Identities = 63/82 (76%), Positives = 73/82 (89%) Frame = +2 Query: 251 KEDKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDI 430 K D KPKKPPTAFFY+LEDFR +Q+QNPDVKSMR++GKACGEKWK MTYEEKVKYYDI Sbjct: 104 KLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDI 163 Query: 431 ATEKRKEFEQAMADYERRKERG 496 ATEKR EF++AMA+Y ++KE G Sbjct: 164 ATEKRAEFDKAMAEYIKKKESG 185 >ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max] Length = 148 Score = 139 bits (349), Expect = 1e-30 Identities = 61/80 (76%), Positives = 72/80 (90%) Frame = +2 Query: 257 DKHKPKKPPTAFFYYLEDFRGGYQEQNPDVKSMRDVGKACGEKWKTMTYEEKVKYYDIAT 436 D KPKKPPTAFFY+LEDFR +QEQNPDVKSMRD+GKACGEKWKTMTYEEKV+YYDIAT Sbjct: 56 DAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 115 Query: 437 EKRKEFEQAMADYERRKERG 496 +KR+EF+ AMA++ ++ E G Sbjct: 116 KKREEFDNAMAEFNKKMENG 135