BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004017
         (1394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   438   e-120
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   435   e-119
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   422   e-115
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial [Vitis vinifera]
          Length = 499

 Score =  438 bits (1127), Expect = e-120
 Identities = 214/446 (47%), Positives = 308/446 (69%)
 Frame = +3

Query: 33   LSRVFNALFYXXXXXXXXXXXPIGAKPKYQSNSRDNLYHRIAPLGDPNVSMVPVLEKWAE 212
            +SRVF  L             P   +    +  +++L  RI+P  D  VS+VP LE+W +
Sbjct: 14   ISRVFRVL-------------PYSTETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRK 60

Query: 213  EGKSVTRDELISIIKELRVYRRYKHALEISQWMTEQRYIPLSAVDVAGRLDLIAKVHGLE 392
            EG+S+ + +L  +I++LR ++RY HALEI +W+ ++ Y  +S  DVA +LDLI+KVHGLE
Sbjct: 61   EGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLE 120

Query: 393  LAEKYFDSISLQIKKFPVYNTLLYCYASAKSIEKAEAFMQQMKQLGYARSPHSYNVLLSL 572
             AEKYF+     ++ F VY  LL CY+  KS+EKAEA MQ+M+ +G+ ++  SYNV+L L
Sbjct: 121  QAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKTL-SYNVMLGL 179

Query: 573  YSKVGRYEKLESLVEEMKVNGVHADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPKIIM 752
            YS++G++EKL++L++EM+ NG+  D FT  I++ AY A S+++GMEK+L  +E +P +  
Sbjct: 180  YSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNS 239

Query: 753  DWNSYAIAANGYIKVGRIDKALQTLKNSEKLITGKQRRVAYDFLLTMYAGARSKEDLYRI 932
            DWN+Y +AANGY+K    +KA++ LK SE+ I+G+ RR  Y+ LLT+YA   +K ++YRI
Sbjct: 240  DWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEVYRI 299

Query: 933  WKLYKSSEKLNNTSFLCMIGSLLKLDDIDGAEKILEEWGSGHTSYDFRVPNLLIAAYCKN 1112
            W LYK+  K  NT ++ M+ SLLKLDD+DGAEK  EEW SG+  +DFRVPNLLI AYCK 
Sbjct: 300  WNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKK 359

Query: 1113 GLVEKAEMFLNKTVEKGKKPLSSTWGYLATGYVAANQFPKALKAMESALLARRPKWMPNR 1292
            GL+EKAE  +++ +E+G++P++ TW  LA GY   NQ  KA+  ++ ALLA    W PN 
Sbjct: 360  GLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNP 419

Query: 1293 DTLSACLEYLKQQGDAEKTEEFVRLL 1370
             TLSACLEYLK +GD E+ E  +RLL
Sbjct: 420  VTLSACLEYLKGKGDVEEAENLIRLL 445


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  435 bits (1118), Expect = e-119
 Identities = 213/446 (47%), Positives = 306/446 (68%)
 Frame = +3

Query: 33   LSRVFNALFYXXXXXXXXXXXPIGAKPKYQSNSRDNLYHRIAPLGDPNVSMVPVLEKWAE 212
            +SRVF  L             P   +    +  +++L  RI+P  D  VS+VP LE+W +
Sbjct: 14   ISRVFRVL-------------PYSTETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRK 60

Query: 213  EGKSVTRDELISIIKELRVYRRYKHALEISQWMTEQRYIPLSAVDVAGRLDLIAKVHGLE 392
            EG+S+ + +L  +I++LR ++RY HALEI +W+ ++ Y  +S  DVA +LDLI+KVHGLE
Sbjct: 61   EGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLE 120

Query: 393  LAEKYFDSISLQIKKFPVYNTLLYCYASAKSIEKAEAFMQQMKQLGYARSPHSYNVLLSL 572
             AEKYF+     ++ F VY  LL CY+  KS+EKAEA MQ+M+ +G+ ++  SYNV+L L
Sbjct: 121  QAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVKTL-SYNVMLGL 179

Query: 573  YSKVGRYEKLESLVEEMKVNGVHADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPKIIM 752
            YS++G++EKL++L++EM+ NG+  D FT  I++ AY A S+++GMEK+L  +E +P +  
Sbjct: 180  YSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDPAVNS 239

Query: 753  DWNSYAIAANGYIKVGRIDKALQTLKNSEKLITGKQRRVAYDFLLTMYAGARSKEDLYRI 932
            DWN+Y +AANGY+K    +KA++ LK SE+ I+G+ RR  Y+ LLT+YA   +K + YRI
Sbjct: 240  DWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEXYRI 299

Query: 933  WKLYKSSEKLNNTSFLCMIGSLLKLDDIDGAEKILEEWGSGHTSYDFRVPNLLIAAYCKN 1112
            W LYK+  K  NT ++ M+ SLLKLDD+DGAEK  EEW SG+  +DFRVPNLLI AYCK 
Sbjct: 300  WNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKK 359

Query: 1113 GLVEKAEMFLNKTVEKGKKPLSSTWGYLATGYVAANQFPKALKAMESALLARRPKWMPNR 1292
            GL+EKAE  +++ +E+G++P++ TW  LA GY   NQ  KA+  ++ ALLA    W PN 
Sbjct: 360  GLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNP 419

Query: 1293 DTLSACLEYLKQQGDAEKTEEFVRLL 1370
             TLSACLEYLK + D E+ E  +RLL
Sbjct: 420  VTLSACLEYLKGKXDVEEAENLIRLL 445


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  422 bits (1084), Expect = e-115
 Identities = 205/411 (49%), Positives = 289/411 (70%)
 Frame = +3

Query: 135  DNLYHRIAPLGDPNVSMVPVLEKWAEEGKSVTRDELISIIKELRVYRRYKHALEISQWMT 314
            D LY RI+  G P++S+VP+LEKW EEG  V + EL   +K+LR YRR+ HAL++S+WMT
Sbjct: 39   DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98

Query: 315  EQRYIPLSAVDVAGRLDLIAKVHGLELAEKYFDSISLQIKKFPVYNTLLYCYASAKSIEK 494
            +++   L   DVA RLDLI+KVHGL  AE+YF+SI    +   VY  LL C A +K + K
Sbjct: 99   DKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGK 158

Query: 495  AEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSIQMA 674
            AEA MQ+MK LG+ ++  SYNV+LSLYS +G YEKL+ LV+EM+ NG+  D+ T  I++ 
Sbjct: 159  AEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLN 218

Query: 675  AYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKVGRIDKALQTLKNSEKLITG 854
            A   +S+I+GMEK+L  MEV+P I + +++Y IAANGY+K G +DK L  LK SE+LI+G
Sbjct: 219  ACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISG 278

Query: 855  KQRRVAYDFLLTMYAGARSKEDLYRIWKLYKSSEKLNNTSFLCMIGSLLKLDDIDGAEKI 1034
              RR AY+FLLT+Y  + +K ++YRIW  YK   +  N+ ++CMI SLLKLDDIDGAE+I
Sbjct: 279  NTRRFAYEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERI 338

Query: 1035 LEEWGSGHTSYDFRVPNLLIAAYCKNGLVEKAEMFLNKTVEKGKKPLSSTWGYLATGYVA 1214
             EEW S    +D R+PN ++  Y + G +EKAE ++NK V  G++P +++W +LA GY +
Sbjct: 339  FEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHS 398

Query: 1215 ANQFPKALKAMESALLARRPKWMPNRDTLSACLEYLKQQGDAEKTEEFVRL 1367
            + Q  KA++ +  A+   +P W P+  TLSACLE+LK QGDAE  EE +++
Sbjct: 399  SGQMTKAVETIRKAISVSKPGWKPSLLTLSACLEFLKGQGDAETLEELLKI 449


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
            mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  412 bits (1058), Expect = e-112
 Identities = 204/419 (48%), Positives = 301/419 (71%), Gaps = 1/419 (0%)
 Frame = +3

Query: 117  YQSNSRDNLYHRIAPLGDPNVSMVPVLEKWAEEGKSVTRDELISIIKELRVYRRYKHALE 296
            Y +  +DNLY RI+P+GDPN+S+ P+L++W  EG+ V +DEL  IIKELRVY+R+KHALE
Sbjct: 23   YSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALE 82

Query: 297  ISQWMTEQRYIPLSAVDVAGRLDLIAKVHGLELAEKYFDSISLQIKKFPVYNTLLYCYAS 476
            IS+WM+++RY PLS  D+A R++LI +VHGLE  E YFD++  Q+K++ V+  LL CYA 
Sbjct: 83   ISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAH 142

Query: 477  AKSIEKAEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFT 656
             K ++KA AFMQ++K++G+A SP  YN++++LY ++G +E+L+SL++EMK  GV+ D+FT
Sbjct: 143  EKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFT 202

Query: 657  MSIQMAAYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKVGRIDKALQTLKNS 836
             SI+++AYAA S+  G+EKI++ ME NP I++DWN Y IAAN Y KVG IDK++  LK S
Sbjct: 203  YSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKS 262

Query: 837  EKLITG-KQRRVAYDFLLTMYAGARSKEDLYRIWKLYKSSEKLNNTSFLCMIGSLLKLDD 1013
            E L+   K++  A++  L +YA    K++++RIW LYK  EK+ N  F+ MI SLL LDD
Sbjct: 263  EGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK-KEKIFNKGFISMITSLLILDD 321

Query: 1014 IDGAEKILEEWGSGHTSYDFRVPNLLIAAYCKNGLVEKAEMFLNKTVEKGKKPLSSTWGY 1193
            I GAE+I +EW +   SYD R+PNLL+ AYC+ GL+EKAE+ LN+ V   +K    +W Y
Sbjct: 322  IKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCY 381

Query: 1194 LATGYVAANQFPKALKAMESALLARRPKWMPNRDTLSACLEYLKQQGDAEKTEEFVRLL 1370
            LA+GY+  +Q P+A++ ++ A      +    ++ L+A   +L  + D E+TE+ V LL
Sbjct: 382  LASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAA---FLDGKQDVEETEKVVNLL 437


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
            predicted protein [Populus trichocarpa]
          Length = 516

 Score =  403 bits (1036), Expect = e-110
 Identities = 197/412 (47%), Positives = 286/412 (69%)
 Frame = +3

Query: 135  DNLYHRIAPLGDPNVSMVPVLEKWAEEGKSVTRDELISIIKELRVYRRYKHALEISQWMT 314
            + L  R++ + D NVS++PVL+KW +EG+++  D + ++IKELR YRRY HALEIS WMT
Sbjct: 46   NRLSRRLSRIRDHNVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMT 105

Query: 315  EQRYIPLSAVDVAGRLDLIAKVHGLELAEKYFDSISLQIKKFPVYNTLLYCYASAKSIEK 494
            ++RY+ L++  VA RLDLI+KVHG+E  E YF++I  ++K    Y  LL CYA  KS+EK
Sbjct: 106  DKRYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEK 165

Query: 495  AEAFMQQMKQLGYARSPHSYNVLLSLYSKVGRYEKLESLVEEMKVNGVHADKFTMSIQMA 674
            AEA MQ+M++LG+AR P  + V+L+LY K G  EKL+ L+ EM+ NG+  DKF   I+++
Sbjct: 166  AEAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLS 225

Query: 675  AYAANSNIDGMEKILQSMEVNPKIIMDWNSYAIAANGYIKVGRIDKALQTLKNSEKLITG 854
            +YAA S+ +G+EK L+ +E +P +++DW +YA  ANGY KVG +DKAL+ LK  E+LITG
Sbjct: 226  SYAAASDSEGLEKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITG 285

Query: 855  KQRRVAYDFLLTMYAGARSKEDLYRIWKLYKSSEKLNNTSFLCMIGSLLKLDDIDGAEKI 1034
            ++R   YD+L+T YA   +KED+ R+W+L+K    + N   + +I SLLK DD++ AEKI
Sbjct: 286  ERRSTPYDYLMTQYATTGTKEDVLRVWELHK--RYVGNRKNISVITSLLKFDDLESAEKI 343

Query: 1035 LEEWGSGHTSYDFRVPNLLIAAYCKNGLVEKAEMFLNKTVEKGKKPLSSTWGYLATGYVA 1214
             EEW S     D  +PN L+ AY + GL+EKAEM L +T+  G KP ++TW  LA GY+ 
Sbjct: 344  FEEWESQKLCDDIIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQ 403

Query: 1215 ANQFPKALKAMESALLARRPKWMPNRDTLSACLEYLKQQGDAEKTEEFVRLL 1370
             NQ PKA++AM+  ++   P+  P+  +  ACL++LK  GD +  E F+ LL
Sbjct: 404  HNQTPKAVEAMKEMIVLSGPRSRPSTVSWVACLQHLKDSGDMDNAEGFINLL 455