BLASTX nr result

ID: Coptis23_contig00004012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004012
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...   105   2e-42
ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Viti...   104   1e-40
ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycin...   100   1e-39
ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycin...   100   1e-39
gb|AAX73300.1| putative pollen specific LIM domain-containing pr...   102   1e-39

>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 190

 Score =  105 bits (263), Expect(2) = 2e-42
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +3

Query: 222 MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 362
           MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL
Sbjct: 1   MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 47



 Score = 92.8 bits (229), Expect(2) = 2e-42
 Identities = 42/57 (73%), Positives = 50/57 (87%)
 Frame = +2

Query: 458 FKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKV 628
           FK TGSLDKSFE  P+ V+VD+S D+ ++NS+VS+MF GTQDKCVACKKTVYPIEKV
Sbjct: 67  FKMTGSLDKSFEGTPKTVRVDRSADQFNSNSRVSSMFAGTQDKCVACKKTVYPIEKV 123



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = +3

Query: 231 FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHH 341
           FAGT  KC AC+KTVY ++++  D   YHKACFRC H
Sbjct: 103 FAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTH 139


>ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|297733831|emb|CBI15078.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  104 bits (260), Expect(2) = 1e-40
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +3

Query: 222 MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 362
           MATFAGTTQKCKACEKTVYLVD+LTADNKVYHKACFRCHHCKGTLKL
Sbjct: 1   MATFAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKL 47



 Score = 88.2 bits (217), Expect(2) = 1e-40
 Identities = 43/57 (75%), Positives = 48/57 (84%)
 Frame = +2

Query: 458 FKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKV 628
           FK TGSLDKSFE AP+ V+   SVD+G  NSKVS+MF GTQ+KCVACKKTVYPIEKV
Sbjct: 67  FKMTGSLDKSFEGAPKTVR---SVDQGQTNSKVSSMFAGTQEKCVACKKTVYPIEKV 120



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +3

Query: 231 FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHH 341
           FAGT +KC AC+KTVY ++++  D   YHKACFRC H
Sbjct: 100 FAGTQEKCVACKKTVYPIEKVGVDGTSYHKACFRCTH 136


>ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycine max]
           gi|255630484|gb|ACU15600.1| unknown [Glycine max]
          Length = 192

 Score =  100 bits (249), Expect(2) = 1e-39
 Identities = 43/47 (91%), Positives = 47/47 (100%)
 Frame = +3

Query: 222 MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 362
           MA+FAGTTQKCKACEKTVYLVDQLTADNK+YHK+CFRC+HCKGTLKL
Sbjct: 2   MASFAGTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKL 48



 Score = 89.0 bits (219), Expect(2) = 1e-39
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = +2

Query: 458 FKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKV 628
           FK+TGSLDKSFE  PR  ++++S D+   N+KVSN+F GTQ+KCVACKKTVYPIEKV
Sbjct: 68  FKKTGSLDKSFEGIPRTARLERSTDQVQTNNKVSNLFAGTQEKCVACKKTVYPIEKV 124



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +3

Query: 231 FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHH 341
           FAGT +KC AC+KTVY ++++  D   YHKACFRC H
Sbjct: 104 FAGTQEKCVACKKTVYPIEKVAVDGTFYHKACFRCTH 140


>ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycine max]
           gi|255630349|gb|ACU15531.1| unknown [Glycine max]
          Length = 192

 Score =  100 bits (249), Expect(2) = 1e-39
 Identities = 43/47 (91%), Positives = 47/47 (100%)
 Frame = +3

Query: 222 MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 362
           MA+FAGTTQKCKACEKTVYLVDQLTADNK+YHK+CFRC+HCKGTLKL
Sbjct: 2   MASFAGTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKL 48



 Score = 89.0 bits (219), Expect(2) = 1e-39
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = +2

Query: 458 FKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKV 628
           FK+TGSLDKSFE  PR  ++++S D+   N+KVSN+F GTQ+KCVACKKTVYPIEKV
Sbjct: 68  FKKTGSLDKSFEGIPRTARLERSADQVQTNTKVSNLFAGTQEKCVACKKTVYPIEKV 124



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +3

Query: 231 FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHH 341
           FAGT +KC AC+KTVY ++++  D   YHKACFRC H
Sbjct: 104 FAGTQEKCVACKKTVYPIEKVAVDGTSYHKACFRCTH 140


>gb|AAX73300.1| putative pollen specific LIM domain-containing protein [Solanum
           lycopersicum]
          Length = 179

 Score =  102 bits (255), Expect(2) = 1e-39
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = +3

Query: 222 MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 362
           MA+F GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL
Sbjct: 1   MASFGGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKL 47



 Score = 86.7 bits (213), Expect(2) = 1e-39
 Identities = 42/57 (73%), Positives = 51/57 (89%)
 Frame = +2

Query: 458 FKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGGTQDKCVACKKTVYPIEKV 628
           FK TGSLDKSFE AP+ V+ ++S D+G +NSKVS++FGGTQDKCVACKKTVYP+EKV
Sbjct: 67  FKMTGSLDKSFEGAPKTVR-ERSADQG-SNSKVSSLFGGTQDKCVACKKTVYPLEKV 121


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