BLASTX nr result
ID: Coptis23_contig00004008
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004008 (212 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004139526.1| PREDICTED: ABC transporter I family member 2... 77 2e-12 ref|XP_003536037.1| PREDICTED: ABC transporter I family member 2... 74 1e-11 gb|ACU19627.1| unknown [Glycine max] 74 1e-11 ref|XP_002308160.1| ABC transporter family protein [Populus tric... 74 2e-11 gb|ADE77121.1| unknown [Picea sitchensis] 73 2e-11 >ref|XP_004139526.1| PREDICTED: ABC transporter I family member 20-like [Cucumis sativus] gi|449518083|ref|XP_004166073.1| PREDICTED: ABC transporter I family member 20-like [Cucumis sativus] Length = 326 Score = 76.6 bits (187), Expect = 2e-12 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = +3 Query: 93 TIVIDNLRFTYPGIDGHPPPGSTPLIQNFSLSLNAGERCL 212 TIVID LRFTYPGIDGHPP GS PLI+NFSL+LNAG+RCL Sbjct: 7 TIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCL 46 >ref|XP_003536037.1| PREDICTED: ABC transporter I family member 20-like [Glycine max] Length = 333 Score = 73.9 bits (180), Expect = 1e-11 Identities = 32/40 (80%), Positives = 38/40 (95%) Frame = +3 Query: 93 TIVIDNLRFTYPGIDGHPPPGSTPLIQNFSLSLNAGERCL 212 TIVI +LRFTYPGIDGHPPPGSTPLIQ+F+L+L++G RCL Sbjct: 14 TIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCL 53 >gb|ACU19627.1| unknown [Glycine max] Length = 333 Score = 73.9 bits (180), Expect = 1e-11 Identities = 32/40 (80%), Positives = 38/40 (95%) Frame = +3 Query: 93 TIVIDNLRFTYPGIDGHPPPGSTPLIQNFSLSLNAGERCL 212 TIVI +LRFTYPGIDGHPPPGSTPLIQ+F+L+L++G RCL Sbjct: 14 TIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCL 53 >ref|XP_002308160.1| ABC transporter family protein [Populus trichocarpa] gi|222854136|gb|EEE91683.1| ABC transporter family protein [Populus trichocarpa] Length = 325 Score = 73.6 bits (179), Expect = 2e-11 Identities = 32/40 (80%), Positives = 36/40 (90%) Frame = +3 Query: 93 TIVIDNLRFTYPGIDGHPPPGSTPLIQNFSLSLNAGERCL 212 TIVI+ LRFTYPGIDGHPPPGS PLI FSL+LN+G+RCL Sbjct: 7 TIVINGLRFTYPGIDGHPPPGSKPLIDEFSLNLNSGDRCL 46 >gb|ADE77121.1| unknown [Picea sitchensis] Length = 329 Score = 73.2 bits (178), Expect = 2e-11 Identities = 31/40 (77%), Positives = 36/40 (90%) Frame = +3 Query: 93 TIVIDNLRFTYPGIDGHPPPGSTPLIQNFSLSLNAGERCL 212 T+ I+NL FTYPGIDGHPPPG+ PLIQNFSL+L AG+RCL Sbjct: 10 TVEINNLNFTYPGIDGHPPPGAKPLIQNFSLTLRAGDRCL 49