BLASTX nr result

ID: Coptis23_contig00003994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003994
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632065.1| PREDICTED: uncharacterized protein LOC100854...    95   2e-17
emb|CBI39183.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_002529769.1| conserved hypothetical protein [Ricinus comm...    90   8e-16
ref|XP_002309822.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
gb|AFK49111.1| unknown [Medicago truncatula]                           85   2e-14

>ref|XP_003632065.1| PREDICTED: uncharacterized protein LOC100854590 [Vitis vinifera]
          Length = 436

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = -2

Query: 749 SFYRSSVDFVLNYCXXXXXXSTFAQIDGEDARQFVAGLADSIGLQNVRTSTIASTAVAAR 570
           SFYR+SV+FV+N C      ST  +IDGEDARQF+AGLAD++GL+N R + I S +VAAR
Sbjct: 277 SFYRTSVEFVINICSRASGQSTSVEIDGEDARQFIAGLADNLGLENTRAARIVSASVAAR 336

Query: 569 THSCFLQAWIL 537
           T SCFLQAW L
Sbjct: 337 TRSCFLQAWAL 347


>emb|CBI39183.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = -2

Query: 749 SFYRSSVDFVLNYCXXXXXXSTFAQIDGEDARQFVAGLADSIGLQNVRTSTIASTAVAAR 570
           SFYR+SV+FV+N C      ST  +IDGEDARQF+AGLAD++GL+N R + I S +VAAR
Sbjct: 106 SFYRTSVEFVINICSRASGQSTSVEIDGEDARQFIAGLADNLGLENTRAARIVSASVAAR 165

Query: 569 THSCFLQAWIL 537
           T SCFLQAW L
Sbjct: 166 TRSCFLQAWAL 176


>ref|XP_002529769.1| conserved hypothetical protein [Ricinus communis]
           gi|223530767|gb|EEF32635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 898

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = -2

Query: 749 SFYRSSVDFVLNYCXXXXXXSTFAQIDGEDARQFVAGLADSIGLQNVRTSTIASTAVAAR 570
           +FYR+SVD+V+N C      S   QIDGEDA++FVAGLA +IGL+NVR + + S AVAAR
Sbjct: 723 AFYRASVDYVINVCSRESSYSVSIQIDGEDAKKFVAGLAANIGLENVRAARMVSAAVAAR 782

Query: 569 THSCFLQAWIL 537
           T SCFLQAW L
Sbjct: 783 TRSCFLQAWAL 793


>ref|XP_002309822.1| predicted protein [Populus trichocarpa] gi|222852725|gb|EEE90272.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = -2

Query: 749 SFYRSSVDFVLNYCXXXXXXSTFAQIDGEDARQFVAGLADSIGLQNVRTSTIASTAVAAR 570
           +FYR+S+D VLN C      ST  +I GED R F+AGLA++IGL+++R + + S AVAAR
Sbjct: 26  AFYRASIDVVLNVCSSAPSYSTSVEIAGEDPRHFIAGLAENIGLESIRAARMVSAAVAAR 85

Query: 569 THSCFLQAWIL 537
           T SCFLQAW++
Sbjct: 86  TRSCFLQAWVI 96


>gb|AFK49111.1| unknown [Medicago truncatula]
          Length = 434

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = -2

Query: 749 SFYRSSVDFVLNYCXXXXXXSTFAQIDGEDARQFVAGLADSIGLQNVRTSTIASTAVAAR 570
           S YR+SV+FVL+ C      ST   I+GED++QF+AG A++IGL+NVR +TI S AVAAR
Sbjct: 274 SLYRASVNFVLDACSSAPTYSTSVHINGEDSQQFLAGFAENIGLENVRAATIVSAAVAAR 333

Query: 569 THSCFLQAWIL 537
           T SC LQAW L
Sbjct: 334 TRSCLLQAWAL 344


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