BLASTX nr result

ID: Coptis23_contig00003987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003987
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300825.1| predicted protein [Populus trichocarpa] gi|2...   383   e-104
ref|XP_002307599.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
emb|CBI28725.3| unnamed protein product [Vitis vinifera]              378   e-103
ref|XP_003632322.1| PREDICTED: probable serine/threonine-protein...   377   e-102
gb|AFK43812.1| unknown [Lotus japonicus]                              377   e-102

>ref|XP_002300825.1| predicted protein [Populus trichocarpa] gi|222842551|gb|EEE80098.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  383 bits (983), Expect = e-104
 Identities = 186/226 (82%), Positives = 213/226 (94%)
 Frame = +2

Query: 68  MEIEQDCQEGSLILLKQGAEARVFESTFLGRRSVVKERFSKKYRHPSLDSKLTMKRLNAE 247
           MEI+ + ++ SLIL+KQGAEARVFES+F+GRRS+VKERFSKKYRHP+LDSKLT+KRLNAE
Sbjct: 1   MEIDAEVKDSSLILIKQGAEARVFESSFVGRRSIVKERFSKKYRHPTLDSKLTIKRLNAE 60

Query: 248 ARCTTKARRLGVSTPVLYATDPALHTLTFEYVVGPAVKDVFLEFGLHGVIEDQMANIATQ 427
           ARC TKARRLGVSTPVLYA DP LH LTFEYV GP+VKD+FLEFGL+GV+E+++ +IA Q
Sbjct: 61  ARCMTKARRLGVSTPVLYAVDPLLHALTFEYVEGPSVKDIFLEFGLNGVVEERLDDIAMQ 120

Query: 428 IGNAIAKIHDGGLLHGDLTTSNMLLRTGSNELVLIDFGLSFTSTLPEDKAVDLYVLERAI 607
           IG++I K+HDGGL+HGDLTTSNML+RTG+N+LVLIDFGLSFTSTLPEDKAVDLYVLERA+
Sbjct: 121 IGDSIGKLHDGGLIHGDLTTSNMLIRTGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180

Query: 608 LSMHSSCGNVMDRILAAYRKSSKQWCSTLNKLAQVRQRGRKRTMVG 745
           LSMHSSCGNVMDRILA YRKSSKQW STLNKLAQVRQRGRKRTM+G
Sbjct: 181 LSMHSSCGNVMDRILAGYRKSSKQWSSTLNKLAQVRQRGRKRTMIG 226


>ref|XP_002307599.1| predicted protein [Populus trichocarpa] gi|222857048|gb|EEE94595.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  379 bits (974), Expect = e-103
 Identities = 184/222 (82%), Positives = 209/222 (94%)
 Frame = +2

Query: 80  QDCQEGSLILLKQGAEARVFESTFLGRRSVVKERFSKKYRHPSLDSKLTMKRLNAEARCT 259
           ++ ++ SLIL+KQGAEARVFES F+GRRS+VKERFSKKYRHP+LDSKLT+KRLNAEARC 
Sbjct: 1   EEVKDSSLILIKQGAEARVFESNFVGRRSIVKERFSKKYRHPTLDSKLTLKRLNAEARCM 60

Query: 260 TKARRLGVSTPVLYATDPALHTLTFEYVVGPAVKDVFLEFGLHGVIEDQMANIATQIGNA 439
           TKARRLGVSTPVLYA DP LH+LTFEYV GP+VKDVFLEFGLHG++E+++ +IA QIG++
Sbjct: 61  TKARRLGVSTPVLYAVDPLLHSLTFEYVEGPSVKDVFLEFGLHGIVEERLDDIAMQIGDS 120

Query: 440 IAKIHDGGLLHGDLTTSNMLLRTGSNELVLIDFGLSFTSTLPEDKAVDLYVLERAILSMH 619
           I K+HDGGL+HGDLTTSNMLLR G+N+LVLIDFGLSFTSTLPEDKAVDLYVLERA+LSMH
Sbjct: 121 IGKLHDGGLIHGDLTTSNMLLRMGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMH 180

Query: 620 SSCGNVMDRILAAYRKSSKQWCSTLNKLAQVRQRGRKRTMVG 745
           SSCGNVMDRILA YRKSSKQW STLNKLAQVRQRGRKRTM+G
Sbjct: 181 SSCGNVMDRILAGYRKSSKQWSSTLNKLAQVRQRGRKRTMIG 222


>emb|CBI28725.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  378 bits (971), Expect = e-103
 Identities = 189/229 (82%), Positives = 211/229 (92%)
 Frame = +2

Query: 59  ALFMEIEQDCQEGSLILLKQGAEARVFESTFLGRRSVVKERFSKKYRHPSLDSKLTMKRL 238
           ++ MEI+ D +E SLILLKQGAEARVFES F+GRR VVKERFSKKYRHPSLDSKLT+KRL
Sbjct: 39  SVIMEIKADGKESSLILLKQGAEARVFESNFVGRRCVVKERFSKKYRHPSLDSKLTLKRL 98

Query: 239 NAEARCTTKARRLGVSTPVLYATDPALHTLTFEYVVGPAVKDVFLEFGLHGVIEDQMANI 418
           NAEARC T+ARRLGV+TPVLY+ DP L TLTFEYV GPAVKDVFL+FGLHGV E++M +I
Sbjct: 99  NAEARCMTRARRLGVATPVLYSVDPVLQTLTFEYVEGPAVKDVFLDFGLHGVAEERMDDI 158

Query: 419 ATQIGNAIAKIHDGGLLHGDLTTSNMLLRTGSNELVLIDFGLSFTSTLPEDKAVDLYVLE 598
           A QIG+AI K+HDG L+HGDLTTSNML+++G+N+LVLIDFGLSFTSTL EDKAVDLYVLE
Sbjct: 159 AKQIGDAIGKLHDGNLIHGDLTTSNMLIQSGTNQLVLIDFGLSFTSTLHEDKAVDLYVLE 218

Query: 599 RAILSMHSSCGNVMDRILAAYRKSSKQWCSTLNKLAQVRQRGRKRTMVG 745
           RA+LSMHSSCGNVMDRILAAYRKSSKQW STLNKLAQVRQRGRKRTMVG
Sbjct: 219 RALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 267


>ref|XP_003632322.1| PREDICTED: probable serine/threonine-protein kinase BUD32 homolog
           [Vitis vinifera]
          Length = 226

 Score =  377 bits (969), Expect = e-102
 Identities = 189/226 (83%), Positives = 209/226 (92%)
 Frame = +2

Query: 68  MEIEQDCQEGSLILLKQGAEARVFESTFLGRRSVVKERFSKKYRHPSLDSKLTMKRLNAE 247
           MEI+ D +E SLILLKQGAEARVFES F+GRR VVKERFSKKYRHPSLDSKLT+KRLNAE
Sbjct: 1   MEIKADGKESSLILLKQGAEARVFESNFVGRRCVVKERFSKKYRHPSLDSKLTLKRLNAE 60

Query: 248 ARCTTKARRLGVSTPVLYATDPALHTLTFEYVVGPAVKDVFLEFGLHGVIEDQMANIATQ 427
           ARC T+ARRLGV+TPVLY+ DP L TLTFEYV GPAVKDVFL+FGLHGV E++M +IA Q
Sbjct: 61  ARCMTRARRLGVATPVLYSVDPVLQTLTFEYVEGPAVKDVFLDFGLHGVAEERMDDIAKQ 120

Query: 428 IGNAIAKIHDGGLLHGDLTTSNMLLRTGSNELVLIDFGLSFTSTLPEDKAVDLYVLERAI 607
           IG+AI K+HDG L+HGDLTTSNML+++G+N+LVLIDFGLSFTSTL EDKAVDLYVLERA+
Sbjct: 121 IGDAIGKLHDGNLIHGDLTTSNMLIQSGTNQLVLIDFGLSFTSTLHEDKAVDLYVLERAL 180

Query: 608 LSMHSSCGNVMDRILAAYRKSSKQWCSTLNKLAQVRQRGRKRTMVG 745
           LSMHSSCGNVMDRILAAYRKSSKQW STLNKLAQVRQRGRKRTMVG
Sbjct: 181 LSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226


>gb|AFK43812.1| unknown [Lotus japonicus]
          Length = 226

 Score =  377 bits (968), Expect = e-102
 Identities = 189/226 (83%), Positives = 208/226 (92%)
 Frame = +2

Query: 68  MEIEQDCQEGSLILLKQGAEARVFESTFLGRRSVVKERFSKKYRHPSLDSKLTMKRLNAE 247
           ME E D ++ SL+L+KQGAEARVFES+F+GRRSV+KERFSKKYRHP LDSKLT+KRLNAE
Sbjct: 1   MEPEADYKDSSLVLIKQGAEARVFESSFVGRRSVIKERFSKKYRHPILDSKLTLKRLNAE 60

Query: 248 ARCTTKARRLGVSTPVLYATDPALHTLTFEYVVGPAVKDVFLEFGLHGVIEDQMANIATQ 427
           ARC TKARRLGV TPVLYA DP LHTLTFEYV GP+VKDVFLEFG  GV E++M NIA+Q
Sbjct: 61  ARCMTKARRLGVRTPVLYAVDPVLHTLTFEYVDGPSVKDVFLEFGSLGVNEERMGNIASQ 120

Query: 428 IGNAIAKIHDGGLLHGDLTTSNMLLRTGSNELVLIDFGLSFTSTLPEDKAVDLYVLERAI 607
           IG+AI K+HDGGL+HGDLTTSNMLL+  +N+LVLIDFGLSFTSTLPEDKAVDLYVLERAI
Sbjct: 121 IGDAIGKLHDGGLVHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAI 180

Query: 608 LSMHSSCGNVMDRILAAYRKSSKQWCSTLNKLAQVRQRGRKRTMVG 745
           LSMHSSCGNVMD+ILAAYRKSSKQW STLNKLAQVRQRGRKRTMVG
Sbjct: 181 LSMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226


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