BLASTX nr result
ID: Coptis23_contig00003983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003983
(1199 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cyt... 611 e-172
emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera] 608 e-172
ref|XP_002882364.1| tRNA synthetase class I family protein [Arab... 603 e-170
ref|NP_187110.1| tryptophanyl-tRNA synthetase [Arabidopsis thali... 598 e-168
ref|XP_004142265.1| PREDICTED: tryptophan--tRNA ligase, cytoplas... 596 e-168
>ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Vitis vinifera]
gi|302143316|emb|CBI21877.3| unnamed protein product
[Vitis vinifera]
Length = 399
Score = 611 bits (1575), Expect = e-172
Identities = 292/377 (77%), Positives = 333/377 (88%)
Frame = +2
Query: 44 EEKQEQVVTPWEVAAKGDAKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVF 223
EE++EQVV PWEV+AK KIDYDKLI KFGCQ+LD +LIDRVQRLT + PHVFLRRGVF
Sbjct: 8 EEEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDQTLIDRVQRLTSRPPHVFLRRGVF 67
Query: 224 FAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKVPLVIQLTD 403
FAHR+ +++L+AYE+GDKFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKVPLVIQLTD
Sbjct: 68 FAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTD 127
Query: 404 DEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENVVRVAKCVS 583
DEK +WKN++VEES+RLARENAKDIIACGFD++RTFIFSDF Y+GGAFY+N+V+V KCV+
Sbjct: 128 DEKCMWKNLSVEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKNMVKVGKCVT 187
Query: 584 FNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAIDQDPYFRM 763
+N+V GIFGF E +IGK+ FPP+QAV G+ LRCLIPCAIDQDPYFRM
Sbjct: 188 YNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAIDQDPYFRM 247
Query: 764 TRDVAPRIGYDKPALIESLFFPALQGEAGKMSASDPNSAIYLTDSDKMIRNKVNKHAFSG 943
TRDVAPRIGY KPALIESLFFPALQGE GKMSASDPNSAIY+TDS K I+NK+NK+AFSG
Sbjct: 248 TRDVAPRIGYHKPALIESLFFPALQGETGKMSASDPNSAIYVTDSGKDIKNKINKYAFSG 307
Query: 944 GQDSQENHRKYGANLEVDIPVKYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLT 1123
GQDS ENHRKYGANLEVDIP+KYL FFLEDDA+LE+I+ EYGAGRMLTG VK RLIEVLT
Sbjct: 308 GQDSIENHRKYGANLEVDIPIKYLGFFLEDDAELEYIRTEYGAGRMLTGDVKKRLIEVLT 367
Query: 1124 ALVTRHREARSKVTDEM 1174
LV RHR AR+ VTDEM
Sbjct: 368 ELVERHRRARAAVTDEM 384
>emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]
Length = 399
Score = 608 bits (1569), Expect = e-172
Identities = 290/377 (76%), Positives = 332/377 (88%)
Frame = +2
Query: 44 EEKQEQVVTPWEVAAKGDAKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVF 223
EE++EQVV PWEV+AK KIDYDKLI KFGCQ+LD +LIDRVQRLT + PH+FLRRGVF
Sbjct: 8 EEEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDQTLIDRVQRLTSRPPHIFLRRGVF 67
Query: 224 FAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKVPLVIQLTD 403
FAHR+ +++L+AYE+GDKFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKVPLVIQLTD
Sbjct: 68 FAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTD 127
Query: 404 DEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENVVRVAKCVS 583
DEK +WKN++VEES+RLARENAKDIIACGFD++RTFIFSDF Y+GGAFY+N+V+V KCV+
Sbjct: 128 DEKCMWKNLSVEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKNMVKVGKCVT 187
Query: 584 FNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAIDQDPYFRM 763
+N+V GIFGF E +IGK+ FPP+QAV G+ LRCLIPCAIDQDPYFRM
Sbjct: 188 YNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAIDQDPYFRM 247
Query: 764 TRDVAPRIGYDKPALIESLFFPALQGEAGKMSASDPNSAIYLTDSDKMIRNKVNKHAFSG 943
TRDVAPRIGY KPALIE LFFPALQGE GKMSASDPNSAIY+TDS K I+NK+NK+AFSG
Sbjct: 248 TRDVAPRIGYHKPALIEXLFFPALQGETGKMSASDPNSAIYVTDSGKDIKNKINKYAFSG 307
Query: 944 GQDSQENHRKYGANLEVDIPVKYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLT 1123
GQDS ENHRKYGANLEVDIP+KYL FFLEDDA+LE+I+ EYGAGRMLTG VK RLIEVLT
Sbjct: 308 GQDSIENHRKYGANLEVDIPIKYLGFFLEDDAELEYIRTEYGAGRMLTGDVKKRLIEVLT 367
Query: 1124 ALVTRHREARSKVTDEM 1174
LV RHR AR+ VTDEM
Sbjct: 368 ELVERHRRARAAVTDEM 384
>ref|XP_002882364.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
lyrata] gi|297328204|gb|EFH58623.1| tRNA synthetase class
I family protein [Arabidopsis lyrata subsp. lyrata]
Length = 402
Score = 603 bits (1555), Expect = e-170
Identities = 293/387 (75%), Positives = 333/387 (86%), Gaps = 5/387 (1%)
Frame = +2
Query: 29 MEVDRE-----EKQEQVVTPWEVAAKGDAKIDYDKLITKFGCQKLDHSLIDRVQRLTGQL 193
MEVD++ E EQVV PWEV+AK KIDYDKLI KFGCQ+LD SLIDRVQRLT +
Sbjct: 1 MEVDKKDEREAESSEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDESLIDRVQRLTSRQ 60
Query: 194 PHVFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAF 373
PHVFLRRGVFFAHR+F++IL+AYEKGDKFYLYTGRGPSSE+LHLGHLIPF+FTKYLQ+AF
Sbjct: 61 PHVFLRRGVFFAHRDFNEILDAYEKGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAF 120
Query: 374 KVPLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYE 553
KVPLVIQLTDDEK +WKN++VEES+RLARENAKDIIACGFDV +TFIFSDF Y+GGAFY+
Sbjct: 121 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYK 180
Query: 554 NVVRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPC 733
N+VRVAKCV+ N+ GIFGF E +IGK+ FPP+QAV G+ LRCLIPC
Sbjct: 181 NMVRVAKCVTLNKAMGIFGFSGEDHIGKLSFPPVQAVPSFPSSFPHLFPGKDNLRCLIPC 240
Query: 734 AIDQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSASDPNSAIYLTDSDKMIR 913
AIDQDPYFRMTRDVAPR+GY KPALIES FFPALQGE GKMSASDPNSAIY+TD+ K I+
Sbjct: 241 AIDQDPYFRMTRDVAPRLGYSKPALIESSFFPALQGENGKMSASDPNSAIYVTDTAKDIK 300
Query: 914 NKVNKHAFSGGQDSQENHRKYGANLEVDIPVKYLSFFLEDDADLEHIKQEYGAGRMLTGQ 1093
NK+N++AFSGGQDS E HR+ GANLEVDIPVKYLSFFLEDD++LEHIK+EYG GRMLTG+
Sbjct: 301 NKINRYAFSGGQDSVEKHRELGANLEVDIPVKYLSFFLEDDSELEHIKKEYGEGRMLTGE 360
Query: 1094 VKSRLIEVLTALVTRHREARSKVTDEM 1174
VK RL EVLT +V RHR AR+ VTDEM
Sbjct: 361 VKKRLTEVLTEMVERHRRARAAVTDEM 387
>ref|NP_187110.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
gi|145331754|ref|NP_001078104.1| tryptophanyl-tRNA
synthetase [Arabidopsis thaliana]
gi|6175164|gb|AAF04890.1|AC011437_5 putative
tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
gi|19310593|gb|AAL85027.1| putative tryptophanyl-tRNA
synthetase [Arabidopsis thaliana]
gi|21436361|gb|AAM51350.1| putative tryptophanyl-tRNA
synthetase [Arabidopsis thaliana]
gi|110740619|dbj|BAE98413.1| putative tryptophanyl-tRNA
synthetase [Arabidopsis thaliana]
gi|332640582|gb|AEE74103.1| tryptophanyl-tRNA synthetase
[Arabidopsis thaliana] gi|332640584|gb|AEE74105.1|
tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 402
Score = 598 bits (1541), Expect = e-168
Identities = 291/387 (75%), Positives = 330/387 (85%), Gaps = 5/387 (1%)
Frame = +2
Query: 29 MEVDRE-----EKQEQVVTPWEVAAKGDAKIDYDKLITKFGCQKLDHSLIDRVQRLTGQL 193
MEVD++ E EQVV PWEV+AK KIDYDKLI KFGCQ+LD SLIDRVQRLT +
Sbjct: 1 MEVDKKDEREAESSEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDESLIDRVQRLTSRQ 60
Query: 194 PHVFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAF 373
PHVFLRR VFFAHR+F++IL+AYE+GDKFYLYTGRGPSSE+LHLGHLIPF+FTKYLQ+AF
Sbjct: 61 PHVFLRRSVFFAHRDFNEILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAF 120
Query: 374 KVPLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYE 553
KVPLVIQLTDDEKSIWKN++VEES+RLARENAKDIIACGFDV +TFIFSDF Y+GGAFY+
Sbjct: 121 KVPLVIQLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYK 180
Query: 554 NVVRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPC 733
N+V+V KCV+ N+ GIFGF E I K+ FPP+QAV G+ LRCLIPC
Sbjct: 181 NMVKVGKCVTLNKAMGIFGFSGEDPIAKLSFPPVQAVPSFPSSFPHLFPGKDNLRCLIPC 240
Query: 734 AIDQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSASDPNSAIYLTDSDKMIR 913
AIDQDPYFRMTRDVAPR+GY KPALIES FFPALQGE GKMSASDPNSAIY+TDS K I+
Sbjct: 241 AIDQDPYFRMTRDVAPRLGYSKPALIESTFFPALQGENGKMSASDPNSAIYVTDSAKDIK 300
Query: 914 NKVNKHAFSGGQDSQENHRKYGANLEVDIPVKYLSFFLEDDADLEHIKQEYGAGRMLTGQ 1093
NK+N++AFSGGQDS E HR+ GANLEVDIPVKYLSFFLEDD++LEHIK+EYG GRMLTG+
Sbjct: 301 NKINRYAFSGGQDSIEKHRELGANLEVDIPVKYLSFFLEDDSELEHIKKEYGEGRMLTGE 360
Query: 1094 VKSRLIEVLTALVTRHREARSKVTDEM 1174
VK RL EVLT +V RHR AR+ VTDEM
Sbjct: 361 VKKRLTEVLTEIVERHRRARAAVTDEM 387
>ref|XP_004142265.1| PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Cucumis
sativus]
Length = 405
Score = 596 bits (1537), Expect = e-168
Identities = 284/375 (75%), Positives = 329/375 (87%)
Frame = +2
Query: 50 KQEQVVTPWEVAAKGDAKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVFFA 229
+ +QVV PW+V+AK KIDYDKLI KFGCQ+L SL+DRVQRLT + PHVFLRRGVFFA
Sbjct: 16 EDDQVVNPWQVSAKDGGKIDYDKLIDKFGCQRLQPSLVDRVQRLTSRPPHVFLRRGVFFA 75
Query: 230 HREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKVPLVIQLTDDE 409
HR+F++ILNAYE+G+KFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKVPLVIQLTDDE
Sbjct: 76 HRDFEEILNAYERGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDE 135
Query: 410 KSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENVVRVAKCVSFN 589
K +WKN++VEES+RLARENAKDIIACGFDV++TFIFSDF Y+GGAFY+N+V+VAKCV++N
Sbjct: 136 KCMWKNLSVEESQRLARENAKDIIACGFDVSKTFIFSDFDYIGGAFYKNMVKVAKCVTYN 195
Query: 590 QVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAIDQDPYFRMTR 769
+V GIFGF E +IGK+ FPP+QAV G+ LRCLIPCAIDQDPYFRMTR
Sbjct: 196 KVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAIDQDPYFRMTR 255
Query: 770 DVAPRIGYDKPALIESLFFPALQGEAGKMSASDPNSAIYLTDSDKMIRNKVNKHAFSGGQ 949
DVAPR+GY KPALIES FFPALQGE GKMSASDPNSAIY+TDS K I+NK+NK+AFSGGQ
Sbjct: 256 DVAPRLGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKINKYAFSGGQ 315
Query: 950 DSQENHRKYGANLEVDIPVKYLSFFLEDDADLEHIKQEYGAGRMLTGQVKSRLIEVLTAL 1129
DS E HR YGANLEVDIP KYL+FFL+DDA+LEHI +EYGAGRMLTG+VK RLI+VLT +
Sbjct: 316 DSIEKHRLYGANLEVDIPTKYLNFFLDDDAELEHITKEYGAGRMLTGEVKQRLIQVLTEM 375
Query: 1130 VTRHREARSKVTDEM 1174
V RHR AR+ VTDEM
Sbjct: 376 VERHRRARAAVTDEM 390