BLASTX nr result

ID: Coptis23_contig00003982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003982
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 ...    69   1e-09
emb|CCA66053.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   4e-08
ref|XP_002438630.1| hypothetical protein SORBIDRAFT_10g023155 [S...    63   6e-08
ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    62   1e-07
emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   2e-07

>ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
           gi|241946953|gb|EES20098.1| hypothetical protein
           SORBIDRAFT_0010s007680 [Sorghum bicolor]
          Length = 531

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
 Frame = -2

Query: 640 QSRWIASLIGRLHTNTQENPNDILCGIR*KWNLRRRLDIVVLEE---NNFILRFEEEQDK 470
           Q  W+  L+G++ + T  +   I   I+  W     L + V+ E   N FI  F  + D 
Sbjct: 50  QEEWL--LVGKVLSPTPIHMTTIRSAIKPAWGNPMGLKLRVIGEKVDNMFITEFGCKSDL 107

Query: 469 QRILRNQP*QILGYLLVLKPFGPNLVPRNIDFNTSPFWITFVGLKLDHQLSVVIKRIAAT 290
           +R+L   P  +  + ++LK +   L    I F+    W+    L L         R  + 
Sbjct: 108 ERVLAGTPWIVGRHAVILKDYNEKLSASEIVFDRMEIWVRIPNLPLGWMNQTRGSRAMSL 167

Query: 289 AGRVLEVFPPDNAPRDANGY*ARAMIVLNQSLTQGIMVQ-TVNHGPTWIGFEYIRLPYHN 113
            G V+ +   D+         AR  I +++ L +G++++ +    P W   +Y +LPY+ 
Sbjct: 168 IGPVVRMDVDDDGKASGAFLRARVAIEIDKPLRRGVLLRMSKAEEPRWFHAQYEKLPYY- 226

Query: 112 CGNCFMLGHDTYKCLDQKNREDNNQMANEMMV 17
           C  C ++GH   +CL    R+D  ++  ++++
Sbjct: 227 CFGCGIMGHSEVECLHPGARDDQGKLPYDVVL 258


>emb|CCA66053.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 452

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
 Frame = -2

Query: 703 DEESNKELQIMDLPRNLLVQSQSRWIASLIGRLHTNTQENPNDILCGIR*KWNLRRRLDI 524
           D+E +  L I  +  N    + +     L+GRL T    N       I   W  +  L I
Sbjct: 15  DDEEDAVLDIESINPN----NDNNVALLLLGRLLTVRSYNVEAFKRTITTVWAPKHGLVI 70

Query: 523 VVLEENNFILRFEEEQDKQRILRNQP*QILGYLLVLKPFGPNLVPRNIDFNTSPFWITFV 344
            VL+ N F  +F   +D  ++L  +P      L++LK    +  P  +  N SPFWI   
Sbjct: 71  RVLKPNLFAFQFFHWRDMMKVLDGRPWCFDNTLILLKEAEGDEQPDQVSLNHSPFWIRLK 130

Query: 343 GLKLDHQLSVVIKRIAATAGRVLEVFPPDNAPRDANGY----*ARAMIVLNQSLTQGIMV 176
            L L+H+ + V+K +    G +L++        D  G+      + M+ +++ L +   +
Sbjct: 131 NLSLNHRSNDVVKALIGNMGEILDI------EEDVLGFGRYRRVKVMLDVSKPLRRYRKI 184

Query: 175 QTVNHGPTWIGFEYIRLPYHNCGNCFMLGHDTYKC 71
           +        I F Y RLP+  C  C ++GH    C
Sbjct: 185 RDKRGRELQIDFAYERLPFF-CLACGVMGHSEKDC 218


>ref|XP_002438630.1| hypothetical protein SORBIDRAFT_10g023155 [Sorghum bicolor]
           gi|241916853|gb|EER89997.1| hypothetical protein
           SORBIDRAFT_10g023155 [Sorghum bicolor]
          Length = 561

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
 Frame = -2

Query: 640 QSRWIASLIGRLHTNTQENPNDILCGIR*KWNLRRRLDIVVLEE---NNFILRFEEEQDK 470
           Q  W+  L+G++ + T  +   I   ++  W     L +  + E   N F+  F  + D 
Sbjct: 50  QEEWL--LVGKVLSPTPIHVTTIRSSMKPAWGNPMGLKLRAIGEKVDNLFVAEFGCKADL 107

Query: 469 QRILRNQP*QILGYLLVLKPFGPNLVPRNIDFNTSPFWITFVGLKLDHQLSVVIKRIAAT 290
           +R+L   P  +  + ++LK +   L    I F+    W+  + L L         R  + 
Sbjct: 108 ERVLAGTPWMVGRHAVILKDYDEKLSASEIVFDRMEIWVRILNLPLGWMNQTRGSRAMSL 167

Query: 289 AGRVLEVFPPDNAPRDANGY*ARAMIVLNQSLTQGIMVQ-TVNHGPTWIGFEYIRLPYHN 113
            G ++ +    +         AR  I +++ L +G++++ +    P W   +Y +LPY+ 
Sbjct: 168 IGPMVRMDVDADGKASGAFLRARVAIEIDKPLRRGVLLRMSKTEEPRWFHAQYEKLPYY- 226

Query: 112 CGNCFMLGHDTYKCLDQKNREDNNQMANEMMV 17
           C  C ++GH   +CL    R+D  ++  ++++
Sbjct: 227 CFGCGIMGHSEVECLHPVARDDQRKLPYDVVL 258


>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
           gi|355478601|gb|AES59804.1| hypothetical protein
           MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 44/191 (23%), Positives = 79/191 (41%)
 Frame = -2

Query: 622 SLIGRLHTNTQENPNDILCGIR*KWNLRRRLDIVVLEENNFILRFEEEQDKQRILRNQP* 443
           +L+G++ T+   N       +   W L+  ++I  L +N F+ +F   +D + IL++ P 
Sbjct: 33  TLVGKIWTDVPYNVRAFKQTMIQAWRLKNTVEIQDLNKNLFLFKFSSRRDAENILQSGPW 92

Query: 442 QILGYLLVLKPFGPNLVPRNIDFNTSPFWITFVGLKLDHQLSVVIKRIAATAGRVLEVFP 263
                LL+L        P  +D +T  FW+    L L  +  ++ K+I    G+ LEV P
Sbjct: 93  SFDRNLLILDTISGEEQPSELDLHTVQFWVRIYDLPLKLRYDLMAKKIGDLVGKFLEVDP 152

Query: 262 PDNAPRDANGY*ARAMIVLNQSLTQGIMVQTVNHGPTWIGFEYIRLPYHNCGNCFMLGHD 83
            DN  R       +  I L   L +G ++                     C  C  +GH 
Sbjct: 153 RDN-NRMGKSIRIKVAIDLRNPLKRGTVLPNF------------------CYKCGRIGHQ 193

Query: 82  TYKCLDQKNRE 50
             +C ++  ++
Sbjct: 194 MKECEEETGQD 204


>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 2/220 (0%)
 Frame = -2

Query: 688 KELQIMDLPRNLLVQSQSRWIASLIGRLHTNTQENPNDILCGIR*KWNLRRRLDIVVLEE 509
           +E +++DL         ++    L+G++ +    N + +   +   W+L   + +  ++ 
Sbjct: 17  EENEVVDLGAVESTNLTAKTSLMLVGKVLSTRAVNLDALKRVMTQIWSLNSNMVVRAIDS 76

Query: 508 NNFILRFEEEQDKQRILRNQP*QILGYLLVLKPFGPNLVPRNIDFNTSPFWITFVGLKLD 329
           N+FI +F   +DK +IL  +P      LLV+     +  P ++   TSPFW+    L  +
Sbjct: 77  NSFIFQFFHWKDKAKILDGRPWLFDQKLLVIDEILGDTQPSDVVLETSPFWVRIYNLPFN 136

Query: 328 HQLSVVIKRIAATAGRVLEVFPPDNAPRDANGY*ARAMIVLN--QSLTQGIMVQTVNHGP 155
            +    ++ IA   G VLEV   D           R  + LN  + L +   ++  +   
Sbjct: 137 CRSDTEVRAIAGGLGPVLEVDIDDFGLERF----CRVKVELNIFKPLRRRQRIRRKDGAV 192

Query: 154 TWIGFEYIRLPYHNCGNCFMLGHDTYKCLDQKNREDNNQM 35
             I ++Y RLP H C  C +LGH    C  +   E   +M
Sbjct: 193 ASIDYKYERLP-HFCFRCGVLGHGDKDCNAEVPEEWEKEM 231


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