BLASTX nr result

ID: Coptis23_contig00003974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003974
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE41104.1| AP2 domain class transcription factor [Malus x do...    91   1e-16
gb|AFG26329.1| ethylene response factor ERF4 [Eriobotrya japonica]     90   2e-16
gb|ACM49847.1| ethylene responsive transcription factor 2a [Prun...    86   3e-15
gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]    84   1e-14
gb|ADE41148.1| AP2 domain class transcription factor [Malus x do...    82   4e-14

>gb|ADE41104.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 387

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 60/109 (55%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
 Frame = +3

Query: 27  MCGGAIISDFI-PTSRSRRLTADYLWPPQLNIPNKSTTITSYSKPKRSEFIHHVNGYDFE 203
           MCGGAIISDFI P +RSRRLTADYLWP       K ++   +SKP RSE +   +  DFE
Sbjct: 1   MCGGAIISDFIAPAARSRRLTADYLWPDL----KKPSSGKRFSKPLRSEIVDLDD--DFE 54

Query: 204 ADFQGFKDGSDADED----HFFNNPFSF-KPKCQDTSATDKSVEFNGPA 335
           ADFQ FKD SD DED     F  + FS  KP     S   KSVEFNG A
Sbjct: 55  ADFQEFKDESDVDEDDEMVDFKPSAFSAGKPSSARGSTAVKSVEFNGQA 103


>gb|AFG26329.1| ethylene response factor ERF4 [Eriobotrya japonica]
          Length = 385

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 59/108 (54%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
 Frame = +3

Query: 27  MCGGAIISDFIPTSRSRRLTADYLWPPQLNIPNKSTTITSYSKPKRSEFIHHVNGYDFEA 206
           MCGGAIISDFI   RSRRLTADYLW P L  P+    +   SKP RSE +   +  DFEA
Sbjct: 1   MCGGAIISDFIAPVRSRRLTADYLW-PDLKKPSSGKRL---SKPLRSEIVDLDD--DFEA 54

Query: 207 DFQGFKDGSDADEDHFF--NNPFSF---KPKCQDTSATDKSVEFNGPA 335
           DFQ FKD SD DED     + P +F   KP     S   KSVEFNG A
Sbjct: 55  DFQEFKDESDVDEDDEMVDSKPSAFSAGKPSSARGSTAVKSVEFNGQA 102


>gb|ACM49847.1| ethylene responsive transcription factor 2a [Prunus salicina]
          Length = 381

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 58/108 (53%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
 Frame = +3

Query: 27  MCGGAIISDFIPTSRSRRLTADYLWPPQLNIPNKSTTITSYSKPKRSEFIHHVNGYDFEA 206
           MCGGAIISDFI  +RSR LTADYLWP       K ++   +SKP R E +    G DFEA
Sbjct: 1   MCGGAIISDFIAPTRSR-LTADYLWPDL----KKPSSGKRFSKPLRPEIVGL--GDDFEA 53

Query: 207 DFQGFKDGSDADEDHFF--NNPFSF---KPKCQDTSATDKSVEFNGPA 335
           DFQ FKD SD DED       P +F   KP     S T KSVEFNG A
Sbjct: 54  DFQEFKDESDVDEDDEMVEAKPSAFSAGKPSSARGSTTVKSVEFNGQA 101


>gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]
          Length = 382

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 57/108 (52%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +3

Query: 27  MCGGAIISDFIPTSRSRRLTADYLWPPQLNIPNKSTTITSYSKPKRSEFIHHVNGYDFEA 206
           MCGGAIISDFI  +RSR LTADYLWP       K ++   +SKP R E I     +DFEA
Sbjct: 1   MCGGAIISDFIAPTRSR-LTADYLWPDL----KKPSSDKRFSKPLRPEIIDL--DHDFEA 53

Query: 207 DFQGFKDGSDADEDHFF--NNPFSF---KPKCQDTSATDKSVEFNGPA 335
           DFQ FKD SD DED       P +F   KP     S T K VEFNG A
Sbjct: 54  DFQEFKDESDVDEDDEMVEAKPSAFSAGKPSSARGSTTVKLVEFNGQA 101


>gb|ADE41148.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 386

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 55/108 (50%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +3

Query: 27  MCGGAIISDFIPTSRSRRLTADYLWPPQLNIPNKSTTITSYSKPKRSEFIHHVNGYDFEA 206
           MCGGAIISDFI   RSRRLTADYLW P L  P+    +   SKP +SE +   +  DFEA
Sbjct: 1   MCGGAIISDFIAPVRSRRLTADYLW-PDLKKPSSGKRL---SKPLKSEIVDLDD--DFEA 54

Query: 207 DFQGFKDGSDADEDHFF--NNPFSF---KPKCQDTSATDKSVEFNGPA 335
           DFQ FKD SD  ED     + P +F    P     S   KSVEF+G A
Sbjct: 55  DFQEFKDESDVGEDDEMVDSKPSAFSAGNPSFARGSTAVKSVEFDGQA 102


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