BLASTX nr result

ID: Coptis23_contig00003972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003972
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622856.1| hypothetical protein MTR_7g055560 [Medicago ...   136   4e-30
ref|XP_002301802.1| predicted protein [Populus trichocarpa] gi|2...   135   7e-30
ref|XP_003551351.1| PREDICTED: uncharacterized protein LOC100803...   132   6e-29
ref|XP_002265382.2| PREDICTED: uncharacterized protein LOC100259...   128   9e-28
ref|XP_002532735.1| hypothetical protein RCOM_1749890 [Ricinus c...   127   1e-27

>ref|XP_003622856.1| hypothetical protein MTR_7g055560 [Medicago truncatula]
           gi|355497871|gb|AES79074.1| hypothetical protein
           MTR_7g055560 [Medicago truncatula]
          Length = 429

 Score =  136 bits (342), Expect = 4e-30
 Identities = 70/120 (58%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = -1

Query: 479 GSIKKEKEWKRTLACKLYEERQNMNIEGSEGMDLLWESYEDDSG-XXXXXXXXXXXXKXX 303
           GS++ EKEW+RTLACKL+EER N N +GSEGMD+LWE+YE +S                 
Sbjct: 307 GSMRVEKEWRRTLACKLFEERHN-NGDGSEGMDMLWETYEKESNKVVKKSNTKKGKKLSE 365

Query: 302 XXXXXXXXXXXXXXVKLCCLQALKFSTGKMNLGMGRPNIVKISKALKGIGWFHHVSKQGK 123
                          KLCCLQALKFSTGKMNLGMGRPN+VK SKALKGIGW HHV K GK
Sbjct: 366 VEFSEDELEEEEVGAKLCCLQALKFSTGKMNLGMGRPNLVKFSKALKGIGWLHHVGKNGK 425


>ref|XP_002301802.1| predicted protein [Populus trichocarpa] gi|222843528|gb|EEE81075.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  135 bits (340), Expect = 7e-30
 Identities = 73/136 (53%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = -1

Query: 524 KAKFEMLHSTALTPCGSIKKEKEWKRTLACKLYEERQNMNIEGSEGMDLLWESYEDDSGX 345
           K   + L  + L   GS++KEKEW+RTLACKL+EER N  ++G EGMD+LWE+YE DS  
Sbjct: 311 KDNSQTLGHSNLGSFGSMRKEKEWRRTLACKLFEERHN--VDGGEGMDMLWETYETDSTK 368

Query: 344 XXXXXXXXXXXKXXXXXXXXXXXXXXXXV--KLCCLQALKFSTGKMNLGMGRPNIVKISK 171
                      K                   +LCCLQALKFS GKMNLGMGRPN+VKISK
Sbjct: 369 VQAKGRAKKGKKGSIEYYDDEEDLEEEKSDGQLCCLQALKFSAGKMNLGMGRPNLVKISK 428

Query: 170 ALKGIGWFHHVSKQGK 123
           ALKGIGW HHVSK  K
Sbjct: 429 ALKGIGWLHHVSKHSK 444


>ref|XP_003551351.1| PREDICTED: uncharacterized protein LOC100803584 [Glycine max]
          Length = 513

 Score =  132 bits (332), Expect = 6e-29
 Identities = 70/128 (54%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
 Frame = -1

Query: 494 ALTPCGSIKKEKEWKRTLACKLYEERQNMNIEGSEGMDLLWESYEDDSGXXXXXXXXXXX 315
           AL   GS++ EKEW+RTLACKL+EER N   +GSEGMD+LWE+YE +S            
Sbjct: 384 ALGSFGSMRVEKEWRRTLACKLFEERHNA--DGSEGMDMLWETYETESNNKVLKKSNTKK 441

Query: 314 XKXXXXXXXXXXXXXXXXV----KLCCLQALKFSTGKMNLGMGRPNIVKISKALKGIGWF 147
            K                     KLCCLQALKFSTGKMNLGMGRPN++K SKALKGIGW 
Sbjct: 442 GKKKGEVENSEEDEEEEEEDMEAKLCCLQALKFSTGKMNLGMGRPNLLKFSKALKGIGWL 501

Query: 146 HHVSKQGK 123
           HHV K G+
Sbjct: 502 HHVGKNGR 509


>ref|XP_002265382.2| PREDICTED: uncharacterized protein LOC100259312 [Vitis vinifera]
          Length = 398

 Score =  128 bits (322), Expect = 9e-28
 Identities = 68/126 (53%), Positives = 78/126 (61%), Gaps = 7/126 (5%)
 Frame = -1

Query: 479 GSIKKEKEWKRTLACKLYEERQNMNIEGSEGMDLLWESYEDDSGXXXXXXXXXXXXKXXX 300
           GS++KEKEWKRTLACKL+EER N   +G EGMDLLWE+YE DS             K   
Sbjct: 271 GSMRKEKEWKRTLACKLFEERNNA--DGGEGMDLLWETYETDSSKVIKAKNDRKKSKKKG 328

Query: 299 XXXXXXXXXXXXXVK-------LCCLQALKFSTGKMNLGMGRPNIVKISKALKGIGWFHH 141
                         +       LCCLQALKFS GKMNLGMGRPN+VK +KALKGIGW H 
Sbjct: 329 EEVGYYSEEEDEGEEEEGMDRQLCCLQALKFSAGKMNLGMGRPNLVKFTKALKGIGWLHQ 388

Query: 140 VSKQGK 123
           VS+ G+
Sbjct: 389 VSRHGR 394


>ref|XP_002532735.1| hypothetical protein RCOM_1749890 [Ricinus communis]
           gi|223527512|gb|EEF29637.1| hypothetical protein
           RCOM_1749890 [Ricinus communis]
          Length = 424

 Score =  127 bits (320), Expect = 1e-27
 Identities = 67/124 (54%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
 Frame = -1

Query: 479 GSIKKEKEWKRTLACKLYEERQNMNIEGSEGMDLLWESYEDDS-----GXXXXXXXXXXX 315
           GS++KEKEW+RTLACKL+EER N   +G EGMD+LWE+YE DS                 
Sbjct: 300 GSMRKEKEWRRTLACKLFEERHNA--DGGEGMDMLWETYETDSIKVQGKSKSKKGKKGNI 357

Query: 314 XKXXXXXXXXXXXXXXXXVKLCCLQALKFSTGKMNLGMGRPNIVKISKALKGIGWFHHVS 135
            +                 +LCCLQALKFS GKM+LGMGRPN+VKISKALKGIGW HHV+
Sbjct: 358 ERHHDDDVDDEDEDELSNGQLCCLQALKFSAGKMSLGMGRPNLVKISKALKGIGWLHHVT 417

Query: 134 KQGK 123
           K  K
Sbjct: 418 KGKK 421


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