BLASTX nr result

ID: Coptis23_contig00003968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003968
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520178.1| conserved hypothetical protein [Ricinus comm...   103   4e-31
ref|XP_003517753.1| PREDICTED: uncharacterized protein LOC100785...   101   5e-30
ref|XP_003519234.1| PREDICTED: uncharacterized protein LOC100784...   100   6e-30
ref|XP_003613486.1| hypothetical protein MTR_5g037230 [Medicago ...    96   1e-28
ref|XP_002272743.1| PREDICTED: uncharacterized protein LOC100243...    93   4e-28

>ref|XP_002520178.1| conserved hypothetical protein [Ricinus communis]
           gi|223540670|gb|EEF42233.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score =  103 bits (258), Expect(2) = 4e-31
 Identities = 50/75 (66%), Positives = 64/75 (85%)
 Frame = -2

Query: 697 NEDVEDTESSLDLLFRFLQSLFKKVSRKAKKATRSILPPIIAPQLVSFAVDGVXXXXXXX 518
           +ED +DTESS+DLLF+FLQS+FKK+S++AKKA+RSILP +I+PQLVSFAVDG+       
Sbjct: 141 DEDDDDTESSIDLLFKFLQSMFKKISKRAKKASRSILPSVISPQLVSFAVDGILLLAALS 200

Query: 517 LVKAFLEVVCTVGGT 473
           +VKA LEVVCT+G T
Sbjct: 201 IVKALLEVVCTLGST 215



 Score = 57.0 bits (136), Expect(2) = 4e-31
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -1

Query: 368 FTAILLLRLIWATLSHFQSNGNRFNQGGNSYGAPQPV 258
           FT ILLLR++WA +S+FQS+GN F QGG+S+G  QPV
Sbjct: 217 FTVILLLRVVWAAISYFQSSGNTFYQGGSSFGGAQPV 253


>ref|XP_003517753.1| PREDICTED: uncharacterized protein LOC100785194 [Glycine max]
          Length = 195

 Score =  101 bits (251), Expect(2) = 5e-30
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = -2

Query: 700 DNEDVEDTESSLDLLFRFLQSLFKKVSRKAKKATRSILPPIIAPQLVSFAVDGVXXXXXX 521
           +++D +D ESS+DLL RFLQS+FKKVS++AKKA+RS+LP +I+PQLVSFAVDG       
Sbjct: 84  ESDDEDDAESSVDLLIRFLQSMFKKVSKRAKKASRSVLPTVISPQLVSFAVDGTLLLASL 143

Query: 520 XLVKAFLEVVCTVGGT 473
            +VKA LEV+CT+GGT
Sbjct: 144 SVVKALLEVICTLGGT 159



 Score = 56.2 bits (134), Expect(2) = 5e-30
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -1

Query: 368 FTAILLLRLIWATLSHFQSNGNRFNQGGNSYGA 270
           F AIL+LR+IWA +S+FQS+GN FNQGGNS+GA
Sbjct: 161 FAAILVLRVIWAAVSYFQSSGNSFNQGGNSFGA 193


>ref|XP_003519234.1| PREDICTED: uncharacterized protein LOC100784688 [Glycine max]
          Length = 193

 Score =  100 bits (250), Expect(2) = 6e-30
 Identities = 47/76 (61%), Positives = 63/76 (82%)
 Frame = -2

Query: 700 DNEDVEDTESSLDLLFRFLQSLFKKVSRKAKKATRSILPPIIAPQLVSFAVDGVXXXXXX 521
           +++D +D ESS+DLL RFLQS+FKKVS++AKKA+RS+LP +I+PQLVSFAVDG       
Sbjct: 82  ESDDEDDAESSVDLLIRFLQSMFKKVSKRAKKASRSVLPTVISPQLVSFAVDGTLLLASL 141

Query: 520 XLVKAFLEVVCTVGGT 473
            +VKA LE++CT+GGT
Sbjct: 142 SVVKALLEIICTLGGT 157



 Score = 56.2 bits (134), Expect(2) = 6e-30
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -1

Query: 368 FTAILLLRLIWATLSHFQSNGNRFNQGGNSYGA 270
           F AIL+LR+IWA +S+FQS+GN FNQGGNS+GA
Sbjct: 159 FAAILVLRVIWAAVSYFQSSGNSFNQGGNSFGA 191


>ref|XP_003613486.1| hypothetical protein MTR_5g037230 [Medicago truncatula]
           gi|355514821|gb|AES96444.1| hypothetical protein
           MTR_5g037230 [Medicago truncatula]
           gi|388498656|gb|AFK37394.1| unknown [Medicago
           truncatula]
          Length = 192

 Score = 95.5 bits (236), Expect(2) = 1e-28
 Identities = 44/76 (57%), Positives = 60/76 (78%)
 Frame = -2

Query: 700 DNEDVEDTESSLDLLFRFLQSLFKKVSRKAKKATRSILPPIIAPQLVSFAVDGVXXXXXX 521
           +  D +D ESS+DLL +FLQS+FKK++++AKKA+RS+LP +I+PQLVSFAVDG       
Sbjct: 81  EESDEDDAESSVDLLIKFLQSMFKKMAKRAKKASRSVLPTVISPQLVSFAVDGTLLLATL 140

Query: 520 XLVKAFLEVVCTVGGT 473
            +VKA LEV+C +GGT
Sbjct: 141 SVVKALLEVICNIGGT 156



 Score = 57.4 bits (137), Expect(2) = 1e-28
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = -1

Query: 368 FTAILLLRLIWATLSHFQSNGNRFNQGGNSYGA 270
           F AIL LR+IWA +SHFQSNGN FNQG NS+GA
Sbjct: 158 FAAILALRVIWAAVSHFQSNGNSFNQGNNSFGA 190


>ref|XP_002272743.1| PREDICTED: uncharacterized protein LOC100243345 [Vitis vinifera]
          Length = 198

 Score = 93.2 bits (230), Expect(2) = 4e-28
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = -2

Query: 703 SDNEDVEDTESSLDLLFRFLQSLFKKVSRKAKKATRSILPPIIAPQLVSFAVDGVXXXXX 524
           SD ED  +TESS DLL  FLQS+FKK S+ AKKA+RS+LP  I+PQLVSFAVDGV     
Sbjct: 85  SDEED--ETESSADLLIEFLQSMFKKASKHAKKASRSVLPAAISPQLVSFAVDGVLILAS 142

Query: 523 XXLVKAFLEVVCTVGGT 473
             ++KA LEV CT+GGT
Sbjct: 143 LSIIKALLEVFCTLGGT 159



 Score = 57.8 bits (138), Expect(2) = 4e-28
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -1

Query: 368 FTAILLLRLIWATLSHFQSNGNRFNQGGNSYGAPQPVT 255
           F  ILLLR+IWAT+S+FQ++GN F+QGG S+G  QP+T
Sbjct: 161 FVVILLLRVIWATVSYFQTSGNGFSQGGTSFGTTQPIT 198


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