BLASTX nr result

ID: Coptis23_contig00003963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003963
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519431.1| protein with unknown function [Ricinus commu...    97   1e-18
emb|CBI30183.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809...    91   1e-16

>ref|XP_002519431.1| protein with unknown function [Ricinus communis]
           gi|223541294|gb|EEF42845.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = -3

Query: 140 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3
           MLVPP LE LLSTAFFS+CRTHGDAARSECNMYCLDC GDAFCFYC
Sbjct: 1   MLVPPWLESLLSTAFFSICRTHGDAARSECNMYCLDCRGDAFCFYC 46


>emb|CBI30183.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -3

Query: 140 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3
           M VPP LEPLL+T FFS+CRTHGDAARSECNMYCLDCSGD+FCFYC
Sbjct: 1   MPVPPWLEPLLTTPFFSICRTHGDAARSECNMYCLDCSGDSFCFYC 46


>ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/49 (83%), Positives = 43/49 (87%)
 Frame = -3

Query: 149 MESMLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3
           M+ MLVPP LE LLST FF+VCRTH DAARSECNMYCLDC GDAFCFYC
Sbjct: 1   MDKMLVPPWLESLLSTQFFTVCRTHEDAARSECNMYCLDCEGDAFCFYC 49


>ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|222867536|gb|EEF04667.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = -3

Query: 140 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3
           MLVPP LE LLST+FF+VCRTHGDAAR+ECNMYCLDC G AFCFYC
Sbjct: 1   MLVPPWLESLLSTSFFTVCRTHGDAARNECNMYCLDCEGGAFCFYC 46


>ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809455 [Glycine max]
          Length = 208

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = -3

Query: 149 MESMLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3
           M +MLVPP LEPLL+T+FF+VCR HGDAARSECNM+CLDC+ +AFCFYC
Sbjct: 1   MGTMLVPPWLEPLLNTSFFNVCRIHGDAARSECNMFCLDCNENAFCFYC 49


Top