BLASTX nr result
ID: Coptis23_contig00003963
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00003963 (454 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519431.1| protein with unknown function [Ricinus commu... 97 1e-18 emb|CBI30183.3| unnamed protein product [Vitis vinifera] 96 4e-18 ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|2... 92 4e-17 ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809... 91 1e-16 >ref|XP_002519431.1| protein with unknown function [Ricinus communis] gi|223541294|gb|EEF42845.1| protein with unknown function [Ricinus communis] Length = 208 Score = 97.4 bits (241), Expect = 1e-18 Identities = 42/46 (91%), Positives = 43/46 (93%) Frame = -3 Query: 140 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3 MLVPP LE LLSTAFFS+CRTHGDAARSECNMYCLDC GDAFCFYC Sbjct: 1 MLVPPWLESLLSTAFFSICRTHGDAARSECNMYCLDCRGDAFCFYC 46 >emb|CBI30183.3| unnamed protein product [Vitis vinifera] Length = 204 Score = 95.5 bits (236), Expect = 4e-18 Identities = 40/46 (86%), Positives = 43/46 (93%) Frame = -3 Query: 140 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3 M VPP LEPLL+T FFS+CRTHGDAARSECNMYCLDCSGD+FCFYC Sbjct: 1 MPVPPWLEPLLTTPFFSICRTHGDAARSECNMYCLDCSGDSFCFYC 46 >ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1| predicted protein [Populus trichocarpa] Length = 202 Score = 94.7 bits (234), Expect = 7e-18 Identities = 41/49 (83%), Positives = 43/49 (87%) Frame = -3 Query: 149 MESMLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3 M+ MLVPP LE LLST FF+VCRTH DAARSECNMYCLDC GDAFCFYC Sbjct: 1 MDKMLVPPWLESLLSTQFFTVCRTHEDAARSECNMYCLDCEGDAFCFYC 49 >ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|222867536|gb|EEF04667.1| predicted protein [Populus trichocarpa] Length = 201 Score = 92.0 bits (227), Expect = 4e-17 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = -3 Query: 140 MLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3 MLVPP LE LLST+FF+VCRTHGDAAR+ECNMYCLDC G AFCFYC Sbjct: 1 MLVPPWLESLLSTSFFTVCRTHGDAARNECNMYCLDCEGGAFCFYC 46 >ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809455 [Glycine max] Length = 208 Score = 90.9 bits (224), Expect = 1e-16 Identities = 38/49 (77%), Positives = 45/49 (91%) Frame = -3 Query: 149 MESMLVPPCLEPLLSTAFFSVCRTHGDAARSECNMYCLDCSGDAFCFYC 3 M +MLVPP LEPLL+T+FF+VCR HGDAARSECNM+CLDC+ +AFCFYC Sbjct: 1 MGTMLVPPWLEPLLNTSFFNVCRIHGDAARSECNMFCLDCNENAFCFYC 49