BLASTX nr result

ID: Coptis23_contig00003950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003950
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285402.1| PREDICTED: peptide transporter PTR3-A [Vitis...   220   3e-55
emb|CAN63331.1| hypothetical protein VITISV_015576 [Vitis vinifera]   219   6e-55
ref|XP_002314492.1| predicted protein [Populus trichocarpa] gi|2...   210   2e-52
ref|XP_002311689.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50
ref|XP_002528812.1| oligopeptide transporter, putative [Ricinus ...   202   4e-50

>ref|XP_002285402.1| PREDICTED: peptide transporter PTR3-A [Vitis vinifera]
           gi|296083701|emb|CBI23690.3| unnamed protein product
           [Vitis vinifera]
          Length = 592

 Score =  220 bits (560), Expect = 3e-55
 Identities = 101/130 (77%), Positives = 121/130 (93%)
 Frame = +3

Query: 339 RDNVGWSVGYGLTTAGLAISILIFLVGTPFYRHRVPTGSPFTRMSRVLVAAIRKWRIPVP 518
           +DNVGW++GYGL TAGLAISI+IFL GTPFYRHRVP+GSPFTRM++V++AA+RKW+ PVP
Sbjct: 212 QDNVGWTLGYGLPTAGLAISIVIFLAGTPFYRHRVPSGSPFTRMAKVIIAALRKWKTPVP 271

Query: 519 SDPKELYELDMAEYAKKRKYRIDSTPSLRFLNKAAVKTGSCDPWMLSTVTQVQETKQMIC 698
           +DPKELYELD+ EYAKK K+RIDSTP+LRFLNKA VKTGS DPWML +VTQV+ETKQM+ 
Sbjct: 272 TDPKELYELDLEEYAKKGKFRIDSTPTLRFLNKACVKTGSKDPWMLCSVTQVEETKQMLR 331

Query: 699 MLPILIATFI 728
           M+PILIATF+
Sbjct: 332 MIPILIATFV 341


>emb|CAN63331.1| hypothetical protein VITISV_015576 [Vitis vinifera]
          Length = 586

 Score =  219 bits (557), Expect = 6e-55
 Identities = 100/130 (76%), Positives = 120/130 (92%)
 Frame = +3

Query: 339 RDNVGWSVGYGLTTAGLAISILIFLVGTPFYRHRVPTGSPFTRMSRVLVAAIRKWRIPVP 518
           +DNVGW++GYGL TAGLAISI+IFL GTPFYRHRVP+GSPFTRM++V++AA+RKW+ PVP
Sbjct: 212 QDNVGWTLGYGLPTAGLAISIMIFLAGTPFYRHRVPSGSPFTRMAKVIIAALRKWKTPVP 271

Query: 519 SDPKELYELDMAEYAKKRKYRIDSTPSLRFLNKAAVKTGSCDPWMLSTVTQVQETKQMIC 698
           +DPKELYELD+ EY KK K+RIDSTP+LRFLNKA VKTGS DPWML +VTQV+ETKQM+ 
Sbjct: 272 TDPKELYELDLEEYGKKGKFRIDSTPTLRFLNKACVKTGSKDPWMLCSVTQVEETKQMLR 331

Query: 699 MLPILIATFI 728
           M+PILIATF+
Sbjct: 332 MIPILIATFV 341


>ref|XP_002314492.1| predicted protein [Populus trichocarpa] gi|222863532|gb|EEF00663.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score =  210 bits (535), Expect = 2e-52
 Identities = 96/130 (73%), Positives = 117/130 (90%)
 Frame = +3

Query: 339 RDNVGWSVGYGLTTAGLAISILIFLVGTPFYRHRVPTGSPFTRMSRVLVAAIRKWRIPVP 518
           +DNVGW++GYGL T GL IS+ IFL GTPFYRHR PTGSPFTRM++V+VAA+RKW++ VP
Sbjct: 210 QDNVGWALGYGLPTLGLVISVAIFLAGTPFYRHRQPTGSPFTRMAKVIVAALRKWKVSVP 269

Query: 519 SDPKELYELDMAEYAKKRKYRIDSTPSLRFLNKAAVKTGSCDPWMLSTVTQVQETKQMIC 698
           +DPKEL+ELD+ EYAK  K+RIDSTP+LRFLNKAAVKTGS DPWML +VTQV+ETKQM+ 
Sbjct: 270 NDPKELHELDLEEYAKAGKFRIDSTPTLRFLNKAAVKTGSTDPWMLCSVTQVEETKQMLR 329

Query: 699 MLPILIATFI 728
           M+PILI+TF+
Sbjct: 330 MIPILISTFV 339


>ref|XP_002311689.1| predicted protein [Populus trichocarpa] gi|222851509|gb|EEE89056.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  204 bits (519), Expect = 2e-50
 Identities = 95/130 (73%), Positives = 115/130 (88%)
 Frame = +3

Query: 339 RDNVGWSVGYGLTTAGLAISILIFLVGTPFYRHRVPTGSPFTRMSRVLVAAIRKWRIPVP 518
           +DNVGW++GYGL T GL IS+ IFL GTP+YRHR+PTGSPFTRM++V+VAA+RK ++ VP
Sbjct: 214 QDNVGWALGYGLPTLGLLISVAIFLAGTPYYRHRLPTGSPFTRMAKVIVAALRKSKVSVP 273

Query: 519 SDPKELYELDMAEYAKKRKYRIDSTPSLRFLNKAAVKTGSCDPWMLSTVTQVQETKQMIC 698
           SDPKELYELD+ EYAK  K+RIDSTP+LRFL KAAVKTG  DPWML +VTQV+ETKQM+ 
Sbjct: 274 SDPKELYELDLEEYAKGGKFRIDSTPTLRFLTKAAVKTGRTDPWMLCSVTQVEETKQMLR 333

Query: 699 MLPILIATFI 728
           M+PILIATF+
Sbjct: 334 MIPILIATFV 343


>ref|XP_002528812.1| oligopeptide transporter, putative [Ricinus communis]
           gi|223531724|gb|EEF33546.1| oligopeptide transporter,
           putative [Ricinus communis]
          Length = 564

 Score =  202 bits (515), Expect = 4e-50
 Identities = 92/130 (70%), Positives = 114/130 (87%)
 Frame = +3

Query: 339 RDNVGWSVGYGLTTAGLAISILIFLVGTPFYRHRVPTGSPFTRMSRVLVAAIRKWRIPVP 518
           +DNVGW++GYGL T GL ISI IFL GTP+YRH++P GSPFTRM+  +VAAIRK ++P+P
Sbjct: 181 QDNVGWALGYGLPTLGLLISISIFLAGTPYYRHKIPAGSPFTRMAMAIVAAIRKIKMPIP 240

Query: 519 SDPKELYELDMAEYAKKRKYRIDSTPSLRFLNKAAVKTGSCDPWMLSTVTQVQETKQMIC 698
           +DPKELYELD+ EYA+  K+RIDSTP LRFLNKAAV+TGS DPWML +VTQV+ETKQM+ 
Sbjct: 241 NDPKELYELDLEEYARNGKFRIDSTPGLRFLNKAAVRTGSTDPWMLCSVTQVEETKQMLR 300

Query: 699 MLPILIATFI 728
           M+P+LIATF+
Sbjct: 301 MIPVLIATFV 310


Top