BLASTX nr result

ID: Coptis23_contig00003939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003939
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517028.1| conserved hypothetical protein [Ricinus comm...   231   2e-72
ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-72
ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine ...   236   5e-71
ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like ...   236   5e-71
ref|XP_004134428.1| PREDICTED: putative ion channel POLLUX-like ...   229   2e-62

>ref|XP_002517028.1| conserved hypothetical protein [Ricinus communis]
           gi|223543663|gb|EEF45191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score =  231 bits (589), Expect(2) = 2e-72
 Identities = 114/144 (79%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
 Frame = -1

Query: 652 RFVIILPA-KGDRYEVDTDAFLSVLALQSFPEMAAIPTIVEVSNSSTCELLKSISGLKVE 476
           R VIILP  KGDRYEVDT+AFLSVLALQ   +M + PTIVEVSNS+TC+LLKSISG+KVE
Sbjct: 253 RAVIILPTTKGDRYEVDTNAFLSVLALQPIMKMDSGPTIVEVSNSNTCDLLKSISGVKVE 312

Query: 475 PVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCGFPYLAGLKYKTIRLGFKEAVVC 296
           PVENV SKLFVQCSRQKGLIKIYRHLLNYRKNVFNLC FP LAG+KY+ +R GF+E VVC
Sbjct: 313 PVENVVSKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSFPNLAGIKYRKLRRGFQEVVVC 372

Query: 295 GLYRSGKIYFHPNDEEVLEQTDKM 224
           GLYR+GKIYFHP+D+E+L+QTDK+
Sbjct: 373 GLYRNGKIYFHPSDDEILQQTDKV 396



 Score = 67.4 bits (163), Expect(2) = 2e-72
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = -3

Query: 227 NGKRKPQVVFSNVVDGETLTSSDPLILESNDYSAEHVMELKKARVVNTVQRPLKSGSKAS 48
           +G+R+P++ +S+V    T   ++  + E N+    H +EL+K R+ N V RP KSGSKAS
Sbjct: 403 HGRRRPEIAYSSVFKEGTSFINNLKVEEDNE-EINHAIELRKTRLENIVTRPNKSGSKAS 461

Query: 47  DLSFGPKERILMLGW 3
           D S GPKE IL+LGW
Sbjct: 462 DSSPGPKECILLLGW 476


>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  233 bits (594), Expect(2) = 3e-72
 Identities = 111/143 (77%), Positives = 130/143 (90%)
 Frame = -1

Query: 652 RFVIILPAKGDRYEVDTDAFLSVLALQSFPEMAAIPTIVEVSNSSTCELLKSISGLKVEP 473
           R +IILP KGDRYE+DT+AFLSVLALQ   +M A+PTIV  SN++TCELLKS+SG+KVEP
Sbjct: 266 RAIIILPTKGDRYEIDTNAFLSVLALQPITKMDAVPTIV--SNTNTCELLKSVSGVKVEP 323

Query: 472 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCGFPYLAGLKYKTIRLGFKEAVVCG 293
           VENVASKLFVQCSRQKGLIKIY+HLLNYRKNVFNLC FP LAG+KY+ +R GF+E VVCG
Sbjct: 324 VENVASKLFVQCSRQKGLIKIYKHLLNYRKNVFNLCSFPVLAGIKYRQLRRGFQEVVVCG 383

Query: 292 LYRSGKIYFHPNDEEVLEQTDKM 224
           LYR+GKIYFHPND+E+L+QTDK+
Sbjct: 384 LYRNGKIYFHPNDDEILQQTDKI 406



 Score = 65.1 bits (157), Expect(2) = 3e-72
 Identities = 34/75 (45%), Positives = 45/75 (60%)
 Frame = -3

Query: 227 NGKRKPQVVFSNVVDGETLTSSDPLILESNDYSAEHVMELKKARVVNTVQRPLKSGSKAS 48
           +GKR PQ+ +S+V         +   LE N  +     EL+K R+ N V+RP +SGSKAS
Sbjct: 413 HGKRNPQIAYSSVFKEGAAFFQNLEALEDNSDNLNLPTELRKTRLKNIVKRPNRSGSKAS 472

Query: 47  DLSFGPKERILMLGW 3
           D S GPKE +L LGW
Sbjct: 473 DWSLGPKECVLFLGW 487


>ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine max]
          Length = 850

 Score =  236 bits (602), Expect(2) = 5e-71
 Identities = 116/143 (81%), Positives = 126/143 (88%)
 Frame = -1

Query: 652 RFVIILPAKGDRYEVDTDAFLSVLALQSFPEMAAIPTIVEVSNSSTCELLKSISGLKVEP 473
           R +IILP KGDRYEVDTDAFLSVLALQ  P M ++PTIVEVS+S TCELLKSIS LKVEP
Sbjct: 376 RAIIILPTKGDRYEVDTDAFLSVLALQPIPNMDSVPTIVEVSSSKTCELLKSISALKVEP 435

Query: 472 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCGFPYLAGLKYKTIRLGFKEAVVCG 293
           VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLC  P L G+ Y+ IR  F+EAVVCG
Sbjct: 436 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSLPNLEGMTYRQIRHRFQEAVVCG 495

Query: 292 LYRSGKIYFHPNDEEVLEQTDKM 224
           LYRSGKIYFHPND E+L+QTDK+
Sbjct: 496 LYRSGKIYFHPNDGEILQQTDKV 518



 Score = 57.8 bits (138), Expect(2) = 5e-71
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = -3

Query: 218 RKPQVVFSNVVDGETLTSSDPLILESNDYSAEHVMELKKARVVNTVQRPLKSGSKASDLS 39
           +KP+V+         + + +  ILE +    EH +EL K R+ N V+RP +SGSK SD +
Sbjct: 530 KKPEVILDGKEGNHEIHNEE--ILEKD---LEHAIELSKVRLANIVKRPNRSGSKGSDGN 584

Query: 38  FGPKERILMLGW 3
            GPKE IL+LGW
Sbjct: 585 LGPKECILLLGW 596


>ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like [Glycine max]
          Length = 788

 Score =  236 bits (602), Expect(2) = 5e-71
 Identities = 117/143 (81%), Positives = 125/143 (87%)
 Frame = -1

Query: 652 RFVIILPAKGDRYEVDTDAFLSVLALQSFPEMAAIPTIVEVSNSSTCELLKSISGLKVEP 473
           R +IILP KGDRYEVDTDAFLSVLALQ  P M ++PTIVEVS+S TCELLKSIS LKVEP
Sbjct: 314 RAIIILPTKGDRYEVDTDAFLSVLALQPIPNMDSVPTIVEVSSSKTCELLKSISALKVEP 373

Query: 472 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCGFPYLAGLKYKTIRLGFKEAVVCG 293
           VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLC  P L GL Y+ IR  F EAVVCG
Sbjct: 374 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSLPNLEGLTYRQIRHRFPEAVVCG 433

Query: 292 LYRSGKIYFHPNDEEVLEQTDKM 224
           LYRSGKIYFHPND E+L+QTDK+
Sbjct: 434 LYRSGKIYFHPNDGEILQQTDKV 456



 Score = 57.8 bits (138), Expect(2) = 5e-71
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = -3

Query: 218 RKPQVVFSNVVDGETLTSSDPLILESNDYSAEHVMELKKARVVNTVQRPLKSGSKASDLS 39
           +KP+V+         + + +  ILE +    EH +EL K R+ N V+RP +SGSKASD +
Sbjct: 468 KKPEVILDGKEGMYEIHNEE--ILEKD---VEHAIELSKVRLANIVKRPNRSGSKASDGN 522

Query: 38  FGPKERILMLGW 3
            GPKE IL+LGW
Sbjct: 523 LGPKECILLLGW 534


>ref|XP_004134428.1| PREDICTED: putative ion channel POLLUX-like 2-like [Cucumis
           sativus]
          Length = 907

 Score =  229 bits (583), Expect(2) = 2e-62
 Identities = 112/143 (78%), Positives = 125/143 (87%)
 Frame = -1

Query: 652 RFVIILPAKGDRYEVDTDAFLSVLALQSFPEMAAIPTIVEVSNSSTCELLKSISGLKVEP 473
           R VIILP KGDRYEVDTDAFLSVLALQ    M +IPTIVEVS+S+TCELLKS++GLKVEP
Sbjct: 437 RAVIILPTKGDRYEVDTDAFLSVLALQPIANMDSIPTIVEVSSSNTCELLKSVTGLKVEP 496

Query: 472 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCGFPYLAGLKYKTIRLGFKEAVVCG 293
           VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL   P   GL YK +R GF EAVVCG
Sbjct: 497 VENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLFSSPNFVGLNYKELRQGFHEAVVCG 556

Query: 292 LYRSGKIYFHPNDEEVLEQTDKM 224
           +YR+GKI+FHPND+E+L+Q DK+
Sbjct: 557 IYRNGKIHFHPNDDEILQQNDKI 579



 Score = 36.6 bits (83), Expect(2) = 2e-62
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -3

Query: 149 LESNDYSAEHVMELKKARVVNTVQRPLKSGSKASDLSFGPKERILMLGW 3
           +++N+      +E  K    N ++ P K   KAS  + GPKE IL+LGW
Sbjct: 612 IKNNNVGLLDSLETDKKGFENIIKHPTKPSFKASKWTEGPKECILLLGW 660


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