BLASTX nr result

ID: Coptis23_contig00003930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003930
         (1996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285729.1| PREDICTED: uncharacterized protein LOC100267...   390   e-177
emb|CAN72570.1| hypothetical protein VITISV_036996 [Vitis vinifera]   390   e-177
emb|CBI16541.3| unnamed protein product [Vitis vinifera]              390   e-177
ref|XP_002269499.1| PREDICTED: uncharacterized protein LOC100247...   395   e-171
ref|XP_002303990.1| predicted protein [Populus trichocarpa] gi|2...   386   e-170

>ref|XP_002285729.1| PREDICTED: uncharacterized protein LOC100267227 isoform 1 [Vitis
            vinifera]
          Length = 422

 Score =  390 bits (1002), Expect(2) = e-177
 Identities = 176/206 (85%), Positives = 186/206 (90%)
 Frame = -2

Query: 1014 SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNEIAMGA 835
            SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQIN+EIAMGA
Sbjct: 217  SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSEIAMGA 276

Query: 834  SIFPVSGYGGGQYDISVLVWKDPNEGNWWMQFGKDYVLGYWPSFLFSYLGDSASMIEWGG 655
            SI PVS +   QYDIS+LVWKDP EGNWWMQFG DYVLGYWP+FLFSYLGDSASMIEWGG
Sbjct: 277  SISPVSAFRNSQYDISILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGG 336

Query: 654  EVVNSEPDGEHTSTHMGSGHFPGEGFGKASYFKNIQIVDGSNNLRDPKGIGTFTEQPNCY 475
            EVVNSEPDG+HTST MGSGHFP EGF K+SYF+NIQIVD SNNL+ PKGIGTFTEQ NCY
Sbjct: 337  EVVNSEPDGQHTSTQMGSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIGTFTEQSNCY 396

Query: 474  DVQYEKKGAWGSYFYYGGPGKNPDCP 397
            DVQ    G WG YFYYGGPG+N +CP
Sbjct: 397  DVQTGSNGDWGHYFYYGGPGRNANCP 422



 Score =  259 bits (661), Expect(2) = e-177
 Identities = 126/199 (63%), Positives = 143/199 (71%)
 Frame = -3

Query: 1673 LNKPAKKTIKSPDGDIIDCIHVSNQPAFDHPLLQNHTIQMRPTYHPEGLYDESKVLSRPK 1494
            LNKPA KTIKS DGD+IDC+H+S+QPAFDHP L+NHTIQMRP YHPEGLYDESKV ++PK
Sbjct: 51   LNKPAVKTIKSSDGDLIDCVHISHQPAFDHPFLKNHTIQMRPNYHPEGLYDESKVSTKPK 110

Query: 1493 EKSSSITQLWHLSGKCPEGTIPIRRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1314
            ++++ ITQLWH++GKCPEGTIPIRRTK                                 
Sbjct: 111  QRTNPITQLWHVNGKCPEGTIPIRRTK---------------------------QDDILR 143

Query: 1313 XXXXXXXXXXXXRTIPEPRSADLDFVSGSGHQHAIVYVEGDKYYGAKATINVWDPKIQQP 1134
                        RTIP PRSAD D ++ SGHQHAI YVEGDKYYGAKATINVW+PKIQQP
Sbjct: 144  ASSMKRYGRKKHRTIPLPRSADPDLINESGHQHAIAYVEGDKYYGAKATINVWEPKIQQP 203

Query: 1133 NEFSLSQIWILGGSFGEDL 1077
            NEFSLSQ+WILGGSFGEDL
Sbjct: 204  NEFSLSQLWILGGSFGEDL 222


>emb|CAN72570.1| hypothetical protein VITISV_036996 [Vitis vinifera]
          Length = 422

 Score =  390 bits (1002), Expect(2) = e-177
 Identities = 176/206 (85%), Positives = 186/206 (90%)
 Frame = -2

Query: 1014 SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNEIAMGA 835
            SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQIN+EIAMGA
Sbjct: 217  SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSEIAMGA 276

Query: 834  SIFPVSGYGGGQYDISVLVWKDPNEGNWWMQFGKDYVLGYWPSFLFSYLGDSASMIEWGG 655
            SI PVS +   QYDIS+LVWKDP EGNWWMQFG DYVLGYWP+FLFSYLGDSASMIEWGG
Sbjct: 277  SISPVSAFRNSQYDISILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGG 336

Query: 654  EVVNSEPDGEHTSTHMGSGHFPGEGFGKASYFKNIQIVDGSNNLRDPKGIGTFTEQPNCY 475
            EVVNSEPDG+HTST MGSGHFP EGF K+SYF+NIQIVD SNNL+ PKGIGTFTEQ NCY
Sbjct: 337  EVVNSEPDGQHTSTQMGSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIGTFTEQSNCY 396

Query: 474  DVQYEKKGAWGSYFYYGGPGKNPDCP 397
            DVQ    G WG YFYYGGPG+N +CP
Sbjct: 397  DVQTGSNGDWGHYFYYGGPGRNANCP 422



 Score =  259 bits (661), Expect(2) = e-177
 Identities = 126/199 (63%), Positives = 143/199 (71%)
 Frame = -3

Query: 1673 LNKPAKKTIKSPDGDIIDCIHVSNQPAFDHPLLQNHTIQMRPTYHPEGLYDESKVLSRPK 1494
            LNKPA KTIKS DGD+IDC+H+S+QPAFDHP L+NHTIQMRP YHPEGLYDESKV ++PK
Sbjct: 51   LNKPAVKTIKSSDGDLIDCVHISHQPAFDHPFLKNHTIQMRPNYHPEGLYDESKVSTKPK 110

Query: 1493 EKSSSITQLWHLSGKCPEGTIPIRRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1314
            ++++ ITQLWH++GKCPEGTIPIRRTK                                 
Sbjct: 111  QRTNPITQLWHVNGKCPEGTIPIRRTK---------------------------QDDILR 143

Query: 1313 XXXXXXXXXXXXRTIPEPRSADLDFVSGSGHQHAIVYVEGDKYYGAKATINVWDPKIQQP 1134
                        RTIP PRSAD D ++ SGHQHAI YVEGDKYYGAKATINVW+PKIQQP
Sbjct: 144  ASSMKRYGRKKHRTIPLPRSADPDLINESGHQHAIAYVEGDKYYGAKATINVWEPKIQQP 203

Query: 1133 NEFSLSQIWILGGSFGEDL 1077
            NEFSLSQ+WILGGSFGEDL
Sbjct: 204  NEFSLSQLWILGGSFGEDL 222


>emb|CBI16541.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  390 bits (1002), Expect(2) = e-177
 Identities = 176/206 (85%), Positives = 186/206 (90%)
 Frame = -2

Query: 1014 SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNEIAMGA 835
            SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQIN+EIAMGA
Sbjct: 206  SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSEIAMGA 265

Query: 834  SIFPVSGYGGGQYDISVLVWKDPNEGNWWMQFGKDYVLGYWPSFLFSYLGDSASMIEWGG 655
            SI PVS +   QYDIS+LVWKDP EGNWWMQFG DYVLGYWP+FLFSYLGDSASMIEWGG
Sbjct: 266  SISPVSAFRNSQYDISILVWKDPKEGNWWMQFGNDYVLGYWPAFLFSYLGDSASMIEWGG 325

Query: 654  EVVNSEPDGEHTSTHMGSGHFPGEGFGKASYFKNIQIVDGSNNLRDPKGIGTFTEQPNCY 475
            EVVNSEPDG+HTST MGSGHFP EGF K+SYF+NIQIVD SNNL+ PKGIGTFTEQ NCY
Sbjct: 326  EVVNSEPDGQHTSTQMGSGHFPEEGFSKSSYFRNIQIVDSSNNLKAPKGIGTFTEQSNCY 385

Query: 474  DVQYEKKGAWGSYFYYGGPGKNPDCP 397
            DVQ    G WG YFYYGGPG+N +CP
Sbjct: 386  DVQTGSNGDWGHYFYYGGPGRNANCP 411



 Score =  259 bits (661), Expect(2) = e-177
 Identities = 126/199 (63%), Positives = 143/199 (71%)
 Frame = -3

Query: 1673 LNKPAKKTIKSPDGDIIDCIHVSNQPAFDHPLLQNHTIQMRPTYHPEGLYDESKVLSRPK 1494
            LNKPA KTIKS DGD+IDC+H+S+QPAFDHP L+NHTIQMRP YHPEGLYDESKV ++PK
Sbjct: 40   LNKPAVKTIKSSDGDLIDCVHISHQPAFDHPFLKNHTIQMRPNYHPEGLYDESKVSTKPK 99

Query: 1493 EKSSSITQLWHLSGKCPEGTIPIRRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1314
            ++++ ITQLWH++GKCPEGTIPIRRTK                                 
Sbjct: 100  QRTNPITQLWHVNGKCPEGTIPIRRTK---------------------------QDDILR 132

Query: 1313 XXXXXXXXXXXXRTIPEPRSADLDFVSGSGHQHAIVYVEGDKYYGAKATINVWDPKIQQP 1134
                        RTIP PRSAD D ++ SGHQHAI YVEGDKYYGAKATINVW+PKIQQP
Sbjct: 133  ASSMKRYGRKKHRTIPLPRSADPDLINESGHQHAIAYVEGDKYYGAKATINVWEPKIQQP 192

Query: 1133 NEFSLSQIWILGGSFGEDL 1077
            NEFSLSQ+WILGGSFGEDL
Sbjct: 193  NEFSLSQLWILGGSFGEDL 211


>ref|XP_002269499.1| PREDICTED: uncharacterized protein LOC100247715 [Vitis vinifera]
            gi|296080944|emb|CBI18666.3| unnamed protein product
            [Vitis vinifera]
          Length = 409

 Score =  395 bits (1015), Expect(2) = e-171
 Identities = 177/206 (85%), Positives = 188/206 (91%)
 Frame = -2

Query: 1014 SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNEIAMGA 835
            SFGEDLNSIE GWQVSPDLYGDNN+RLFTYWTSDAYQATGCYNLLCSGF+QINNEIAMGA
Sbjct: 204  SFGEDLNSIEVGWQVSPDLYGDNNSRLFTYWTSDAYQATGCYNLLCSGFVQINNEIAMGA 263

Query: 834  SIFPVSGYGGGQYDISVLVWKDPNEGNWWMQFGKDYVLGYWPSFLFSYLGDSASMIEWGG 655
            SIFPVS Y G QYDIS+LVWKDP EGNWWMQFG DYVLGYWP+ LFSYL DSASMIEWGG
Sbjct: 264  SIFPVSRYHGSQYDISILVWKDPKEGNWWMQFGNDYVLGYWPALLFSYLSDSASMIEWGG 323

Query: 654  EVVNSEPDGEHTSTHMGSGHFPGEGFGKASYFKNIQIVDGSNNLRDPKGIGTFTEQPNCY 475
            EVVNSE DG+HTST MGSGHFPGEGFGKASYF+NIQIVDGSN+LR PK IGTFTEQ +CY
Sbjct: 324  EVVNSEADGQHTSTQMGSGHFPGEGFGKASYFRNIQIVDGSNSLRPPKDIGTFTEQSSCY 383

Query: 474  DVQYEKKGAWGSYFYYGGPGKNPDCP 397
            DVQ+   G WGSY YYGGPG+NP+CP
Sbjct: 384  DVQHGNHGEWGSYLYYGGPGRNPNCP 409



 Score =  235 bits (600), Expect(2) = e-171
 Identities = 115/199 (57%), Positives = 137/199 (68%)
 Frame = -3

Query: 1673 LNKPAKKTIKSPDGDIIDCIHVSNQPAFDHPLLQNHTIQMRPTYHPEGLYDESKVLSRPK 1494
            LNK A KTIKS DGDIIDC+ V++QPAFDHP+L+NHTIQM+P++HPEGL+ E K  S+  
Sbjct: 38   LNKRAVKTIKSRDGDIIDCVRVTHQPAFDHPMLKNHTIQMKPSFHPEGLFTEMKAPSKSH 97

Query: 1493 EKSSSITQLWHLSGKCPEGTIPIRRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1314
            ++S  +TQLW L+G+CP+GT+PIRRTK                                 
Sbjct: 98   KRSKPVTQLWQLNGRCPKGTVPIRRTK---------------------------REDVLR 130

Query: 1313 XXXXXXXXXXXXRTIPEPRSADLDFVSGSGHQHAIVYVEGDKYYGAKATINVWDPKIQQP 1134
                        RT P+PRSAD D +S SGHQHAIVYVEGDKYYGAKAT+NVW+PKIQQP
Sbjct: 131  ANSISRFGKKKHRTFPQPRSADPDLISQSGHQHAIVYVEGDKYYGAKATVNVWEPKIQQP 190

Query: 1133 NEFSLSQIWILGGSFGEDL 1077
            NEFSLSQ+WILGGSFGEDL
Sbjct: 191  NEFSLSQMWILGGSFGEDL 209


>ref|XP_002303990.1| predicted protein [Populus trichocarpa] gi|222841422|gb|EEE78969.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  386 bits (992), Expect(2) = e-170
 Identities = 174/206 (84%), Positives = 185/206 (89%)
 Frame = -2

Query: 1014 SFGEDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNEIAMGA 835
            SFG+DLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQIN+EIAMGA
Sbjct: 219  SFGQDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSEIAMGA 278

Query: 834  SIFPVSGYGGGQYDISVLVWKDPNEGNWWMQFGKDYVLGYWPSFLFSYLGDSASMIEWGG 655
            SI PVSGY   QYDIS+LVWKDP EG+WWMQFG DYVLGYWPSFLFSYL DSASMIEWGG
Sbjct: 279  SISPVSGYRNSQYDISILVWKDPKEGHWWMQFGNDYVLGYWPSFLFSYLADSASMIEWGG 338

Query: 654  EVVNSEPDGEHTSTHMGSGHFPGEGFGKASYFKNIQIVDGSNNLRDPKGIGTFTEQPNCY 475
            EVVNSEPDG HTST MGSG FP EGFGKASYF+NIQ+VD +NNL+ PKGIGTFTE+ NCY
Sbjct: 339  EVVNSEPDGRHTSTQMGSGRFPEEGFGKASYFRNIQVVDSTNNLKAPKGIGTFTEKSNCY 398

Query: 474  DVQYEKKGAWGSYFYYGGPGKNPDCP 397
            DVQ    G WG YFYYGGPG+N +CP
Sbjct: 399  DVQTGNNGDWGRYFYYGGPGRNENCP 424



 Score =  239 bits (610), Expect(2) = e-170
 Identities = 118/200 (59%), Positives = 140/200 (70%), Gaps = 1/200 (0%)
 Frame = -3

Query: 1673 LNKPAKKTIKSPDGDIIDCIHVSNQPAFDHPLLQNHTIQMRPTYHPEG-LYDESKVLSRP 1497
            LNKPA K+I+SPDGDIIDC+H+S+QPAFDHP L++H IQMRP+YHPEG ++D+SKV +  
Sbjct: 52   LNKPAVKSIESPDGDIIDCVHMSHQPAFDHPYLKDHKIQMRPSYHPEGRVFDDSKVSTES 111

Query: 1496 KEKSSSITQLWHLSGKCPEGTIPIRRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1317
            KE+ + ITQLWH++ KCPEGTIPIRRTK                                
Sbjct: 112  KERKNPITQLWHVNDKCPEGTIPIRRTK---------------------------EDDVL 144

Query: 1316 XXXXXXXXXXXXXRTIPEPRSADLDFVSGSGHQHAIVYVEGDKYYGAKATINVWDPKIQQ 1137
                         R IP+PRSAD D ++ SGHQHAI YVEGDKYYGAKATINVW+PKIQQ
Sbjct: 145  RASSVKRYGRKKHRAIPQPRSADPDLINESGHQHAIAYVEGDKYYGAKATINVWEPKIQQ 204

Query: 1136 PNEFSLSQIWILGGSFGEDL 1077
            PNEFSLSQ+WILGGSFG+DL
Sbjct: 205  PNEFSLSQLWILGGSFGQDL 224


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