BLASTX nr result

ID: Coptis23_contig00003918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003918
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282891.1| PREDICTED: protein DEHYDRATION-INDUCED 19 ho...   182   5e-44
ref|XP_002318968.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002512480.1| conserved hypothetical protein [Ricinus comm...   175   6e-42
gb|AAN77145.1| fiber protein Fb2 [Gossypium barbadense]               174   1e-41
gb|ADP30960.1| dehydration-induced 19-like protein [Gossypium hi...   174   1e-41

>ref|XP_002282891.1| PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3-like isoform 1
           [Vitis vinifera]
          Length = 220

 Score =  182 bits (462), Expect = 5e-44
 Identities = 87/159 (54%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
 Frame = -3

Query: 479 TKADLCLGYEEFDDEDDVNVKVEFPCPFCTEDFDIIGLCCHIDDEHPAEARDGVCPVCGT 300
           +++D+ +G+EEFD ++D+  + EFPCPFC+E FDI+GLCCHIDDEHP EA++GVCP+C  
Sbjct: 23  SRSDMFMGFEEFDGDEDI--REEFPCPFCSEYFDIVGLCCHIDDEHPVEAKNGVCPICAI 80

Query: 299 RVGMDMVGHIAMQHAQYFKMQRKKRFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXX 120
           RVG+DMV HI +QH   FKMQRK++ RKGGS S +SLLRKE+R+GNLQ            
Sbjct: 81  RVGVDMVAHITLQHGSVFKMQRKRKTRKGGSHSTLSLLRKELREGNLQSLFGSSSCIVSS 140

Query: 119 XXXAPDPLLSSFIYNMPMFEEPKPVQP-CSSESSAVKKS 6
              APDPLLSSFI  +PM ++   VQP  S+++++ KK+
Sbjct: 141 SSAAPDPLLSSFI--LPMADDYIGVQPQLSAQTTSTKKN 177


>ref|XP_002318968.1| predicted protein [Populus trichocarpa] gi|222857344|gb|EEE94891.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  177 bits (449), Expect = 2e-42
 Identities = 86/158 (54%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
 Frame = -3

Query: 479 TKADLCLGYEEFDDEDDVNVKVEFPCPFCTEDFDIIGLCCHIDDEHPAEARDGVCPVCGT 300
           +++D+ +G+EE D +DD+  + EFPCPFC+E FDI+GLCCHIDDEHP E+++GVCPVC  
Sbjct: 23  SRSDMFMGFEEIDGDDDI--REEFPCPFCSEYFDIVGLCCHIDDEHPVESKNGVCPVCAM 80

Query: 299 RVGMDMVGHIAMQHAQYFKMQRKKRFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXX 120
           RVG+DMV HI +QH   FKMQRK++ R+GG  S +SLLRKE+R+GNLQ            
Sbjct: 81  RVGVDMVAHITLQHGNIFKMQRKRKSRRGGPHSTLSLLRKELREGNLQSLLGGSSCIVSS 140

Query: 119 XXXAPDPLLSSFIYNMPMFEEPKPVQPC-SSESSAVKK 9
              APDPLLSSFI  +PM ++    QP   SE+S+ KK
Sbjct: 141 SNAAPDPLLSSFI--LPMVDDFTSSQPSFLSETSSAKK 176


>ref|XP_002512480.1| conserved hypothetical protein [Ricinus communis]
           gi|223548441|gb|EEF49932.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  175 bits (444), Expect = 6e-42
 Identities = 86/159 (54%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
 Frame = -3

Query: 479 TKADLCLGYEEFDDEDDVNVKVEFPCPFCTEDFDIIGLCCHIDDEHPAEARDGVCPVCGT 300
           +++D+ +G+EE D +DD+  + EFPCPFC+E FDI+GLCCHIDDEHP EA++GVCPVC  
Sbjct: 23  SRSDVFMGFEEIDGDDDI--REEFPCPFCSEYFDIVGLCCHIDDEHPMEAKNGVCPVCAM 80

Query: 299 RVGMDMVGHIAMQHAQYFKMQRKKRFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXX 120
           RVG+DMV HI +QH   FKMQRK++ RK G  S ++LLRKE+R+GNLQ            
Sbjct: 81  RVGVDMVAHITLQHGNIFKMQRKRKSRKSGHHSTLTLLRKELREGNLQSLFGGSSCIITS 140

Query: 119 XXXAPDPLLSSFIYNMPMFEEPKPVQPC-SSESSAVKKS 6
              APDPLLSSFI  +PM ++    QP  S E+ + KKS
Sbjct: 141 SNAAPDPLLSSFI--LPMADDFTSAQPSFSKETCSSKKS 177


>gb|AAN77145.1| fiber protein Fb2 [Gossypium barbadense]
          Length = 220

 Score =  174 bits (442), Expect = 1e-41
 Identities = 86/159 (54%), Positives = 113/159 (71%), Gaps = 1/159 (0%)
 Frame = -3

Query: 479 TKADLCLGYEEFDDEDDVNVKVEFPCPFCTEDFDIIGLCCHIDDEHPAEARDGVCPVCGT 300
           +++++ +G+EE D+EDD+  + EFPCPFC+E FDI+GLCCHIDDEHP EA++GVCPVC  
Sbjct: 23  SRSNMLMGFEEIDEEDDI--REEFPCPFCSEYFDIVGLCCHIDDEHPVEAKNGVCPVCAL 80

Query: 299 RVGMDMVGHIAMQHAQYFKMQRKKRFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXX 120
           RVG+DMV HI +QH   FKMQRK++ RKGGS S +SLL+KE+R+GNLQ            
Sbjct: 81  RVGVDMVAHITLQHGNIFKMQRKRKSRKGGSHSTLSLLKKELREGNLQTLLGGSSCIVSS 140

Query: 119 XXXAPDPLLSSFIYNMPMFEEPKPVQ-PCSSESSAVKKS 6
              APDPLLS FI  +PM ++    Q P  +E+S   KS
Sbjct: 141 SNSAPDPLLSLFI--LPMVDDFVSDQPPFRTETSRNNKS 177


>gb|ADP30960.1| dehydration-induced 19-like protein [Gossypium hirsutum]
          Length = 219

 Score =  174 bits (442), Expect = 1e-41
 Identities = 89/158 (56%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
 Frame = -3

Query: 476 KADLCLGYEEFDDEDDVNVKVEFPCPFCTEDFDIIGLCCHIDDEHPAEARDGVCPVCGTR 297
           ++D+ +G+EE D ED++  + EF CPFC+E FDI+GLCCHIDDEHP EA++GVCPVC  R
Sbjct: 24  RSDMLMGFEEIDGEDEI--REEFRCPFCSEYFDIVGLCCHIDDEHPVEAKNGVCPVCAMR 81

Query: 296 VGMDMVGHIAMQHAQYFKMQRKKRFRKGGSQSNISLLRKEIRDGNLQXXXXXXXXXXXXX 117
           VG+DMV HI +QH   FKMQRK++ RKGGS S +SLLRKE+R+GNLQ             
Sbjct: 82  VGVDMVAHITLQHGNIFKMQRKRKSRKGGSHSTLSLLRKELREGNLQ-SFFGGSSCTVSS 140

Query: 116 XXAPDPLLSSFIYNMPMFEEPKPVQP-CSSESSAVKKS 6
             APDPLLSSFI  +PM ++   VQP  S E+   KKS
Sbjct: 141 NSAPDPLLSSFI--LPMVDDFVSVQPNFSRETRTTKKS 176


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