BLASTX nr result

ID: Coptis23_contig00003914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003914
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565726.1| uncharacterized protein [Arabidopsis thaliana] ...   141   6e-32
ref|XP_002309020.1| predicted protein [Populus trichocarpa] gi|1...   139   2e-31
gb|AAM61161.1| unknown [Arabidopsis thaliana]                         139   2e-31
ref|XP_003529088.1| PREDICTED: uncharacterized protein LOC100306...   135   3e-30
ref|XP_002269616.1| PREDICTED: uncharacterized protein LOC100258...   134   1e-29

>ref|NP_565726.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297822895|ref|XP_002879330.1| hypothetical protein
           ARALYDRAFT_902184 [Arabidopsis lyrata subsp. lyrata]
           gi|4582445|gb|AAD24829.1| expressed protein [Arabidopsis
           thaliana] gi|20198160|gb|AAM15434.1| expressed protein
           [Arabidopsis thaliana] gi|26451972|dbj|BAC43077.1|
           unknown protein [Arabidopsis thaliana]
           gi|28416745|gb|AAO42903.1| At2g31490 [Arabidopsis
           thaliana] gi|227204167|dbj|BAH56935.1| AT2G31490
           [Arabidopsis thaliana] gi|297325169|gb|EFH55589.1|
           hypothetical protein ARALYDRAFT_902184 [Arabidopsis
           lyrata subsp. lyrata] gi|330253460|gb|AEC08554.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 71

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +2

Query: 35  MGGGMEANKNKFIEEWGAARETLEHNFRWTRRNFALIGIFGIAVPILVYKGIVRDFHMQD 214
           MGGGME NKNKFIE+WG+ARE LEHNFRWTRRNFALIGIFGIA+PI+VYKGIV+DFHMQD
Sbjct: 1   MGGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQD 60

Query: 215 EDAGRPYRKFL 247
           EDAGRP+RKFL
Sbjct: 61  EDAGRPHRKFL 71


>ref|XP_002309020.1| predicted protein [Populus trichocarpa] gi|118488449|gb|ABK96039.1|
           unknown [Populus trichocarpa]
           gi|222854996|gb|EEE92543.1| predicted protein [Populus
           trichocarpa]
          Length = 71

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/71 (88%), Positives = 70/71 (98%)
 Frame = +2

Query: 35  MGGGMEANKNKFIEEWGAARETLEHNFRWTRRNFALIGIFGIAVPILVYKGIVRDFHMQD 214
           MGGGMEANKNKFIE+WG+ARETLE NFRWTRRNFALIG+FGIAVPILVYKGIV++F+MQD
Sbjct: 1   MGGGMEANKNKFIEDWGSARETLEQNFRWTRRNFALIGLFGIAVPILVYKGIVKEFNMQD 60

Query: 215 EDAGRPYRKFL 247
           EDAGRPYRKF+
Sbjct: 61  EDAGRPYRKFM 71


>gb|AAM61161.1| unknown [Arabidopsis thaliana]
          Length = 71

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +2

Query: 35  MGGGMEANKNKFIEEWGAARETLEHNFRWTRRNFALIGIFGIAVPILVYKGIVRDFHMQD 214
           MGGGME NKNKFIE WG+ARE LEHNFRWTRRNFALIGIFGIA+PI+VYKGIV+DFHMQD
Sbjct: 1   MGGGMETNKNKFIEYWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQD 60

Query: 215 EDAGRPYRKFL 247
           EDAGRP+RKFL
Sbjct: 61  EDAGRPHRKFL 71


>ref|XP_003529088.1| PREDICTED: uncharacterized protein LOC100306283 isoform 1 [Glycine
           max]
          Length = 71

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/71 (84%), Positives = 66/71 (92%)
 Frame = +2

Query: 35  MGGGMEANKNKFIEEWGAARETLEHNFRWTRRNFALIGIFGIAVPILVYKGIVRDFHMQD 214
           MGGGMEANKNKFIE+WG ARE LE NFRWTRRN AL+GIFGIA+P+LVYKGIVR+FHMQD
Sbjct: 1   MGGGMEANKNKFIEDWGTARENLEFNFRWTRRNLALVGIFGIAIPVLVYKGIVREFHMQD 60

Query: 215 EDAGRPYRKFL 247
           ED GRPYRKF+
Sbjct: 61  EDNGRPYRKFM 71


>ref|XP_002269616.1| PREDICTED: uncharacterized protein LOC100258994 isoform 1 [Vitis
           vinifera] gi|359485910|ref|XP_003633354.1| PREDICTED:
           uncharacterized protein LOC100258994 isoform 2 [Vitis
           vinifera] gi|296081504|emb|CBI20027.3| unnamed protein
           product [Vitis vinifera]
          Length = 71

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/71 (84%), Positives = 67/71 (94%)
 Frame = +2

Query: 35  MGGGMEANKNKFIEEWGAARETLEHNFRWTRRNFALIGIFGIAVPILVYKGIVRDFHMQD 214
           MGGGMEA+KNKFIEEWGAARE LE+NFRWTRRN  L GIFG+AVPILVY+GIV++FHMQD
Sbjct: 1   MGGGMEAHKNKFIEEWGAARENLEYNFRWTRRNLVLAGIFGVAVPILVYRGIVKEFHMQD 60

Query: 215 EDAGRPYRKFL 247
           EDAGRP+RKFL
Sbjct: 61  EDAGRPHRKFL 71


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