BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003912
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20609.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [V...   122   2e-26
ref|XP_002516480.1| conserved hypothetical protein [Ricinus comm...   113   2e-23
ref|XP_002309522.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
emb|CAN79509.1| hypothetical protein VITISV_038336 [Vitis vinifera]   110   2e-22

>emb|CBI20609.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/92 (68%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +3

Query: 129 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQR-SASTLPTGRNT 305
           MK GKDE+K  GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLS+PSQR +   +P   N 
Sbjct: 1   MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNN 60

Query: 306 APGPLPPVASLSQGAGNARSVFPPFYIPPSTP 401
           A   +PP AS SQG+G+ R VF P +I PSTP
Sbjct: 61  ASNLVPP-ASSSQGSGHERGVFFPHHISPSTP 91


>ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [Vitis vinifera]
          Length = 725

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/92 (68%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +3

Query: 129 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQR-SASTLPTGRNT 305
           MK GKDE+K  GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLS+PSQR +   +P   N 
Sbjct: 1   MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNN 60

Query: 306 APGPLPPVASLSQGAGNARSVFPPFYIPPSTP 401
           A   +PP AS SQG+G+ R VF P +I PSTP
Sbjct: 61  ASNLVPP-ASSSQGSGHERGVFFPHHISPSTP 91


>ref|XP_002516480.1| conserved hypothetical protein [Ricinus communis]
           gi|223544300|gb|EEF45821.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 720

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/92 (63%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
 Frame = +3

Query: 126 KMKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRSASTLPTGRNT 305
           KMK GKD++K  GPMFPRLHVNDT+KGGPRAPPRNKMALYEQLSIPSQR  +      N 
Sbjct: 4   KMKRGKDDEKMMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNNHGALLHNP 63

Query: 306 APGP-LPPVASLSQGAGNARSVFPPFYIPPST 398
           +    L P AS SQG+G  R++  P ++PPST
Sbjct: 64  SKATNLVPAASSSQGSGYERNLHLPLHVPPST 95


>ref|XP_002309522.1| predicted protein [Populus trichocarpa] gi|222855498|gb|EEE93045.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/110 (53%), Positives = 66/110 (60%)
 Frame = +3

Query: 129 MKGGKDEDKNTGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRSASTLPTGRNTA 308
           MK GKD DK  GPMFPRLHVNDT+KGGPRAPPRNKMALYEQLSIPSQR    +    ++ 
Sbjct: 1   MKRGKDYDKIMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNPDVLPRNSSN 60

Query: 309 PGPLPPVASLSQGAGNARSVFPPFYIPPSTPAXXXXXXXXXXXXGMHLRT 458
              L P  S SQG+G  R    P Y+P  TP             G +L T
Sbjct: 61  TSDLAPTGSSSQGSGLERHFPYPHYVPSPTPTDVAEKYHSRQPDGRNLNT 110


>emb|CAN79509.1| hypothetical protein VITISV_038336 [Vitis vinifera]
          Length = 333

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +3

Query: 162 GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQR-SASTLPTGRNTAPGPLPPVASL 338
           GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLS+PSQR +   +P   N A   +PP AS 
Sbjct: 2   GPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNNASNLVPP-ASS 60

Query: 339 SQGAGNARSVFPPFYIPPSTP 401
           SQG+G+ R VF P +I PSTP
Sbjct: 61  SQGSGHERGVFFPHHISPSTP 81