BLASTX nr result

ID: Coptis23_contig00003910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003910
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22848.3| unnamed protein product [Vitis vinifera]              204   5e-50
ref|XP_002519271.1| conserved hypothetical protein [Ricinus comm...   186   8e-45
ref|XP_003546304.1| PREDICTED: dnaJ homolog subfamily C member 1...   162   2e-37
ref|XP_002280185.1| PREDICTED: uncharacterized protein LOC100246...   162   2e-37
ref|XP_002316054.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33

>emb|CBI22848.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  204 bits (518), Expect = 5e-50
 Identities = 128/340 (37%), Positives = 169/340 (49%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1017 MARKGNQQRNSLDRHSSNQKVQISDSCGG-PLAXXXXXXXXXXXXXXXXXXXXNKIDNPA 841
            MARKGNQQ+N LDRHSSN K ++SDS  G P                      N+  NP 
Sbjct: 1    MARKGNQQKNGLDRHSSNHKRKVSDSGRGVPDTKERVQTGEVKIVAGEELPNGNQASNPL 60

Query: 840  VDRTXXXXXXXXXXXXXXXXXXXXXKEQPGPDKVPDSEQSATESGNLRPREDVQDPSAFD 661
             +                       KE+   D     + S     N  P E   +    +
Sbjct: 61   TETANKTSSAGDEKKSKQRSGKSLRKEKQEMDTTHGLDHSVPPGSN--PGECAGNQFMTE 118

Query: 660  VSQLRGSDRASLGSDQGSVGSKDGLGCSQNGLSTEDVVEGSGPFNTMVSKYLGASALSIL 481
               +R  +  S  ++ GS       GCS NGL +E  ++ S   +TMV + L ASALSIL
Sbjct: 119  AFSIREENGTSPRTNNGSKHPSGSSGCSPNGLPSEKAMKNSEFSDTMVVRSLRASALSIL 178

Query: 480  KAACGWLESKKPLFTTLTAILFGVGDYICLKSEQAYPIIWKWLGHLGNLILLISMVWLDC 301
            KAA  WLE +KP F +L   +    D I +K EQ YPII KWL + GN++LL+SMVWLDC
Sbjct: 179  KAANEWLERQKPFFISLNIRILNARDCIRMKIEQTYPIILKWLMYFGNIMLLLSMVWLDC 238

Query: 300  SLRGFVSFMRLGTTSFFAVFWCGILSLIAMVGISKFLLIMGVATXXXXXXXXXXXXXXXX 121
            ++RG  SF+R+GTTSFF+V WC I S++AM+G+SKFL+I+ V+                 
Sbjct: 239  TIRGIDSFLRMGTTSFFSVIWCSIFSVVAMIGMSKFLIILIVSVLMGVFLGFTLASLVIA 298

Query: 120  XXXXXXLWMYGSFWXXXXXXXXXXXGFKMHYERFALLSTT 1
                  LW+YGSFW            F + +ER ALL TT
Sbjct: 299  ISGVVILWIYGSFWTTALIIFCGGLAFTLSHERAALLITT 338


>ref|XP_002519271.1| conserved hypothetical protein [Ricinus communis]
            gi|223541586|gb|EEF43135.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 741

 Score =  186 bits (473), Expect = 8e-45
 Identities = 120/340 (35%), Positives = 168/340 (49%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1017 MARKGNQQRNSLDRHSSNQKVQISDSCGG-PLAXXXXXXXXXXXXXXXXXXXXNKIDNPA 841
            MARKGNQQRN +DRH+SN K +++DS    P                      N+  +P+
Sbjct: 1    MARKGNQQRNGVDRHASNHKKKVTDSGHVVPDTITRGKVSEVKVFPGEEIPNGNQPSSPS 60

Query: 840  VDRTXXXXXXXXXXXXXXXXXXXXXKEQPGPDKVPDSEQSATESGNLRPREDVQDPSAFD 661
            VD                       K++   D+V D   +A+   N     D   P   +
Sbjct: 61   VDNLRRTYTAGDDNKSKQNSGKLQRKDKKWIDQVRDLGDNASSKNN---SGDSNSPFV-E 116

Query: 660  VSQLRGSDRASLGSDQGSVGSKDGLGCSQNGLSTEDVVEGSGPFNTMVSKYLGASALSIL 481
               +R  + A  G + G    ++G+    NGL   +V+E       +  + L   ALS L
Sbjct: 117  TPGIRQENGALPGCESGLKRVRNGVNYLFNGLHIRNVMENMELSGNVAVRNLRTLALSTL 176

Query: 480  KAACGWLESKKPLFTTLTAILFGVGDYICLKSEQAYPIIWKWLGHLGNLILLISMVWLDC 301
            KAA  WLE  +PLF  +T+ L+   DY+ +K EQAYP++ KWL  LGN++LL+SMVWLD 
Sbjct: 177  KAAGVWLERHRPLFVRVTSNLYNARDYVNMKVEQAYPVVSKWLIQLGNIMLLLSMVWLDF 236

Query: 300  SLRGFVSFMRLGTTSFFAVFWCGILSLIAMVGISKFLLIMGVATXXXXXXXXXXXXXXXX 121
            +LRG  SF+RLGTTSFF+V WC I+S++AMVG  KFL+++ +A                 
Sbjct: 237  TLRGIDSFLRLGTTSFFSVIWCSIMSVLAMVGTFKFLIVLAIAACVGVIIGLTLGLLVVA 296

Query: 120  XXXXXXLWMYGSFWXXXXXXXXXXXGFKMHYERFALLSTT 1
                  LW+YGSFW            F + +ER ALL TT
Sbjct: 297  FSGIVFLWLYGSFWTTMFVIIIGGLAFVLSHERVALLITT 336


>ref|XP_003546304.1| PREDICTED: dnaJ homolog subfamily C member 14-like [Glycine max]
          Length = 744

 Score =  162 bits (410), Expect = 2e-37
 Identities = 110/351 (31%), Positives = 159/351 (45%), Gaps = 12/351 (3%)
 Frame = -1

Query: 1017 MARKGNQQRNSLDRHSSNQKVQISDSCGGPLAXXXXXXXXXXXXXXXXXXXXNKIDNPAV 838
            MARKG QQ+N +DRH  N K  +S    G +                      + D+  V
Sbjct: 1    MARKGTQQKNGVDRHGLNNKKGVS----GGVLPGMKGHGKGGPVKVFPREGLAETDSIGV 56

Query: 837  DRTXXXXXXXXXXXXXXXXXXXXXKEQPGPDKVPDSEQSATESGNLRPREDVQDPSAFDV 658
             +T                       +   +K+     S  E   +  + D+++ S+F+ 
Sbjct: 57   SQTACDGRSSGDDYN----------NEQRSEKI-----SGKEKQGMAGKHDLEESSSFES 101

Query: 657  SQLRGS----DRASLG--------SDQGSVGSKDGLGCSQNGLSTEDVVEGSGPFNTMVS 514
            +   GS      AS+         S+QG    K  L C  + L  + VVE     + ++ 
Sbjct: 102  NSGDGSLNSEAEASIQEENGTLPRSNQGQQSIKSRLSCILDSLLLKSVVEKVELADNVII 161

Query: 513  KYLGASALSILKAACGWLESKKPLFTTLTAILFGVGDYICLKSEQAYPIIWKWLGHLGNL 334
            + L  S  SI  AA  WL    PLF +L  I+F   + +  K  QAYP++ KWL HLGN+
Sbjct: 162  RRLRLSVFSIFTAASEWLNRHTPLFVSLRTIMFETCNTVRTKVVQAYPVVLKWLMHLGNI 221

Query: 333  ILLISMVWLDCSLRGFVSFMRLGTTSFFAVFWCGILSLIAMVGISKFLLIMGVATXXXXX 154
            +LL+ + WLDC+LRG  SF+R+GTTSFF+V WC I S+I+M+G+ KFL ++G+A      
Sbjct: 222  MLLLLVFWLDCALRGVDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLAVLGLAALIGFF 281

Query: 153  XXXXXXXXXXXXXXXXXLWMYGSFWXXXXXXXXXXXGFKMHYERFALLSTT 1
                             LW YGSFW            F + +ER ALL TT
Sbjct: 282  LGLMLAILVVAIIGVVTLWFYGSFWTTAFFIILGGLAFMLRHERVALLITT 332


>ref|XP_002280185.1| PREDICTED: uncharacterized protein LOC100246610 [Vitis vinifera]
          Length = 592

 Score =  162 bits (409), Expect = 2e-37
 Identities = 84/176 (47%), Positives = 109/176 (61%)
 Frame = -1

Query: 528 NTMVSKYLGASALSILKAACGWLESKKPLFTTLTAILFGVGDYICLKSEQAYPIIWKWLG 349
           +TMV + L ASALSILKAA  WLE +KP F +L   +    D I +K EQ YPII KWL 
Sbjct: 8   DTMVVRSLRASALSILKAANEWLERQKPFFISLNIRILNARDCIRMKIEQTYPIILKWLM 67

Query: 348 HLGNLILLISMVWLDCSLRGFVSFMRLGTTSFFAVFWCGILSLIAMVGISKFLLIMGVAT 169
           + GN++LL+SMVWLDC++RG  SF+R+GTTSFF+V WC I S++AM+G+SKFL+I+ V+ 
Sbjct: 68  YFGNIMLLLSMVWLDCTIRGIDSFLRMGTTSFFSVIWCSIFSVVAMIGMSKFLIILIVSV 127

Query: 168 XXXXXXXXXXXXXXXXXXXXXXLWMYGSFWXXXXXXXXXXXGFKMHYERFALLSTT 1
                                 LW+YGSFW            F + +ER ALL TT
Sbjct: 128 LMGVFLGFTLASLVIAISGVVILWIYGSFWTTALIIFCGGLAFTLSHERAALLITT 183


>ref|XP_002316054.1| predicted protein [Populus trichocarpa] gi|222865094|gb|EEF02225.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score =  149 bits (376), Expect = 1e-33
 Identities = 79/174 (45%), Positives = 100/174 (57%)
 Frame = -1

Query: 522 MVSKYLGASALSILKAACGWLESKKPLFTTLTAILFGVGDYICLKSEQAYPIIWKWLGHL 343
           MV   L ASALS+LK A  WLE ++  F +L   ++   DY+ +K  +AYP++ KWL   
Sbjct: 1   MVVGNLRASALSMLKVAGEWLERQEQPFVSLKTNIYASRDYVKMKVAKAYPVVLKWLLQF 60

Query: 342 GNLILLISMVWLDCSLRGFVSFMRLGTTSFFAVFWCGILSLIAMVGISKFLLIMGVATXX 163
           GN++LL+SMVWLDC+LRG  SF+RLGTTSFF+V WC ILS+IAMVGISK L+I+ +A   
Sbjct: 61  GNIVLLLSMVWLDCTLRGMDSFLRLGTTSFFSVIWCSILSVIAMVGISKILIILAIAAFV 120

Query: 162 XXXXXXXXXXXXXXXXXXXXLWMYGSFWXXXXXXXXXXXGFKMHYERFALLSTT 1
                               LW YGSFW            F    ER  LL  T
Sbjct: 121 GVFIGLILGLLIVAISGLVFLWFYGSFWTTVFVIIISGNSFSPFQERLTLLIIT 174


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