BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003907
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group] g...   512   e-143
ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [S...   511   e-143
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   510   e-142
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142
ref|XP_003558573.1| PREDICTED: succinate dehydrogenase [ubiquino...   509   e-142

>ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group]
           gi|75135397|sp|Q6ZDY8.1|DHSA_ORYSJ RecName:
           Full=Succinate dehydrogenase [ubiquinone] flavoprotein
           subunit, mitochondrial; AltName: Full=Flavoprotein
           subunit of complex II; Short=FP; Flags: Precursor
           gi|34394418|dbj|BAC83515.1| putative succinate
           dehydrogenase flavoprotein alpha subunit [Oryza sativa
           Japonica Group] gi|113610381|dbj|BAF20759.1|
           Os07g0134800 [Oryza sativa Japonica Group]
           gi|215686878|dbj|BAG89728.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199047|gb|EEC81474.1| hypothetical protein
           OsI_24801 [Oryza sativa Indica Group]
          Length = 630

 Score =  512 bits (1319), Expect = e-143
 Identities = 247/261 (94%), Positives = 256/261 (98%)
 Frame = +2

Query: 2   ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFR 181
           ACAADRTGHA+LHTLYGQAMKHNTQFFVEYFALDLIMDS GTCQGVIALNMEDGTLHRFR
Sbjct: 174 ACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSEGTCQGVIALNMEDGTLHRFR 233

Query: 182 AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGSGCLIT 361
           A +TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG+GCLIT
Sbjct: 234 ATNTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLIT 293

Query: 362 EGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGRGVGPLKDHIYLHL 541
           EGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGRGVGPLKDHIYLHL
Sbjct: 294 EGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHL 353

Query: 542 NHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDD 721
           NHLPPEVLKERLPGISETAAIFAGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV +KGD+
Sbjct: 354 NHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTMKGDN 413

Query: 722 PDSLVPGLMAAGEAACASVHG 784
           PDS+VPGLMAAGEAACASVHG
Sbjct: 414 PDSVVPGLMAAGEAACASVHG 434


>ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [Sorghum bicolor]
           gi|241917660|gb|EER90804.1| hypothetical protein
           SORBIDRAFT_01g006490 [Sorghum bicolor]
          Length = 620

 Score =  511 bits (1315), Expect = e-143
 Identities = 245/261 (93%), Positives = 256/261 (98%)
 Frame = +2

Query: 2   ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFR 181
           ACAADRTGHA+LHTLYGQAMKHNTQFFVEYFALDL+MD+ G CQGVIALNMEDGTLHRFR
Sbjct: 164 ACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLLMDNEGICQGVIALNMEDGTLHRFR 223

Query: 182 AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGSGCLIT 361
           AA+TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG+GCLIT
Sbjct: 224 AANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLIT 283

Query: 362 EGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGRGVGPLKDHIYLHL 541
           EGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGRGVGPLKDHIYLHL
Sbjct: 284 EGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHL 343

Query: 542 NHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDD 721
           NHLPPEVLKERLPGISETAAIFAGVDVT+EPIPVL TVHYNMGGIPTNYHGEV+ IKGDD
Sbjct: 344 NHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLHIKGDD 403

Query: 722 PDSLVPGLMAAGEAACASVHG 784
           PD++VPGLMAAGEAACASVHG
Sbjct: 404 PDAVVPGLMAAGEAACASVHG 424


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 622

 Score =  510 bits (1314), Expect = e-142
 Identities = 245/261 (93%), Positives = 257/261 (98%)
 Frame = +2

Query: 2   ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFR 181
           ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDL+M+S G+CQGVIA+NMEDGTLHRFR
Sbjct: 166 ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIAMNMEDGTLHRFR 225

Query: 182 AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGSGCLIT 361
           AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG+GCLIT
Sbjct: 226 AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLIT 285

Query: 362 EGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGRGVGPLKDHIYLHL 541
           EGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGRGVGPLKDHIYLHL
Sbjct: 286 EGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHL 345

Query: 542 NHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDD 721
           NHLPP+VLKERLPGISETAAIFAGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV +KG+D
Sbjct: 346 NHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGND 405

Query: 722 PDSLVPGLMAAGEAACASVHG 784
           PDS+VPGLMAAGEAACASVHG
Sbjct: 406 PDSVVPGLMAAGEAACASVHG 426


>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  509 bits (1312), Expect = e-142
 Identities = 245/261 (93%), Positives = 255/261 (97%)
 Frame = +2

Query: 2   ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFR 181
           ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIM++ G CQGVIALNMEDGTLHRFR
Sbjct: 177 ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNNDGICQGVIALNMEDGTLHRFR 236

Query: 182 AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGSGCLIT 361
           AASTILATGGYGR YFSATSAHTCTGDGNAMVARAG+PLEDLEFVQFHPTGIYG+GCLIT
Sbjct: 237 AASTILATGGYGRTYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLIT 296

Query: 362 EGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGRGVGPLKDHIYLHL 541
           EGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGRGVGPLKDHIYLHL
Sbjct: 297 EGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHL 356

Query: 542 NHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDD 721
           NHLPP+VLKERLPGISETAAIFAGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV IKGDD
Sbjct: 357 NHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDD 416

Query: 722 PDSLVPGLMAAGEAACASVHG 784
           PD+++PGLMAAGEAACASVHG
Sbjct: 417 PDAVIPGLMAAGEAACASVHG 437


>ref|XP_003558573.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit, mitochondrial-like [Brachypodium distachyon]
          Length = 617

 Score =  509 bits (1311), Expect = e-142
 Identities = 243/261 (93%), Positives = 256/261 (98%)
 Frame = +2

Query: 2   ACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFR 181
           ACAADRTGHA+LHTLYGQAMKHNTQFFVEYFALDLIMD+ GTCQGVIALNMEDGTLHRFR
Sbjct: 161 ACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDNEGTCQGVIALNMEDGTLHRFR 220

Query: 182 AASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGSGCLIT 361
           + +TI+ATGGYGRAYFSATSAHTCTGDGNAMVARAGLPL+DLEFVQFHPTGIYG+GCLIT
Sbjct: 221 STNTIIATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLIT 280

Query: 362 EGSRGEGGTLRNSEGERFMERYAPTAKDLASRDIVSRSMTMEIREGRGVGPLKDHIYLHL 541
           EGSRGEGG LRNSEGERFMERYAPTAKDLASRD+VSRSMTMEIREGRGVGPLKDHIYLHL
Sbjct: 281 EGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHL 340

Query: 542 NHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLATVHYNMGGIPTNYHGEVVQIKGDD 721
           NHLPPEVLKERLPGISETAAIFAGVDVT+EPIPVL TVHYNMGGIPTNYHGEVV IKGD+
Sbjct: 341 NHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVHIKGDN 400

Query: 722 PDSLVPGLMAAGEAACASVHG 784
           PDS++PGL+AAGEAACASVHG
Sbjct: 401 PDSVIPGLLAAGEAACASVHG 421