BLASTX nr result
ID: Coptis23_contig00003905
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003905
(3515 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24386.3| unnamed protein product [Vitis vinifera] 446 e-122
ref|XP_004149652.1| PREDICTED: la-related protein 1-like [Cucumi... 443 e-121
ref|XP_004165480.1| PREDICTED: LOW QUALITY PROTEIN: la-related p... 438 e-120
ref|XP_002272083.2| PREDICTED: uncharacterized protein LOC100254... 422 e-115
ref|XP_002519615.1| lupus la ribonucleoprotein, putative [Ricinu... 417 e-113
>emb|CBI24386.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 446 bits (1148), Expect = e-122
Identities = 245/415 (59%), Positives = 288/415 (69%), Gaps = 7/415 (1%)
Frame = +3
Query: 1926 GGLSNDFASEYSGFTGDQNTFMLDEEMELEQPTIRK----DHRRIEDEDDEMDGSDRAVQ 2093
G LSNDFAS FMLDEE+E E T +K RRI+DED+EM +D+ V
Sbjct: 432 GDLSNDFASP----------FMLDEELEPEPKTSKKVDLSSTRRIDDEDEEMVVNDQDVH 481
Query: 2094 KLMIVTQDPQAVKSDRSSATESDTLSKELASAINDGLYFYEQELKAKRFNNPRANNGLGM 2273
+L+IVTQ+ + + + A ES ++S ELASAINDGL+FYEQELK K N + +
Sbjct: 482 RLVIVTQNSRTGEGSGNGAQESKSISNELASAINDGLFFYEQELKTKGSNCRKNSFSFEN 541
Query: 2274 RDRYSRSPSQANGFPNAKVIV-SPGNNVSEENGHVNSRRRQNKGANKQQ-SSHKQRLFSS 2447
RD SRS S G NAK S G++ EE G+ NSRR+QNKG KQQ SSHKQR F+S
Sbjct: 542 RDGISRSSSIVPGLVNAKTGENSIGSSGCEEPGNCNSRRKQNKGFPKQQASSHKQRFFTS 601
Query: 2448 NNRNPGSVRNLHGITVSESPPSNSVGFFFGSTPPDSYGPGSSKLXXXXXXXXXXXXXXXX 2627
N RN GS RN GI +SESPPSNSVGFFFGSTPP+++GP SSKL
Sbjct: 602 NFRNHGSGRNSLGI-ISESPPSNSVGFFFGSTPPENHGPRSSKLCISPRGSLSGSSPPVG 660
Query: 2628 XXXXXFPPFQHPSHQLLEENGFKQQKYVKYHKRCLSDRKRLGIGCSEEMNTLYRFWSFFL 2807
FPPFQHPSHQLLEENGFKQQKY+KY KRCLSDRK+LGIGCSEEMNTLYRFWS+FL
Sbjct: 661 SMPKSFPPFQHPSHQLLEENGFKQQKYLKYQKRCLSDRKKLGIGCSEEMNTLYRFWSYFL 720
Query: 2808 REEFMRPMYDEFRKLALEDAASKYNYGLECLFRFYSYGLERHFREDVYEDFEQITLEFYK 2987
R+ F MY EFRK ALEDAA+ YNYG+ECLFRFYSYGLE+ FRED+YEDFEQ+T++FY
Sbjct: 721 RDMFNHSMYKEFRKFALEDAAANYNYGIECLFRFYSYGLEKEFREDLYEDFEQLTIDFYH 780
Query: 2988 KGNLYGLEKYWAFHHFREAREKKASSKSVKKHXXXXXXXXXXFRCIEDF-RAKEK 3149
KGNLYGLEKYWAFHH+R +K + KKH +R ++DF RAKEK
Sbjct: 781 KGNLYGLEKYWAFHHYRGVDNQKPAP---KKHPELDQLLKEKYRGLDDFHRAKEK 832
Score = 291 bits (746), Expect = 7e-76
Identities = 170/383 (44%), Positives = 204/383 (53%), Gaps = 15/383 (3%)
Frame = +2
Query: 251 SPWKKPAGD----GKGAVMGAESWPALAEAR------PMTKSLDFTGAAPAPVIKVPEKP 400
SPWK+P G G G VMGAESWPAL++A+ P K G PAP + P
Sbjct: 20 SPWKRPLGGDAKGGDGPVMGAESWPALSDAQRPKNPGPAAKPPVLAGVRPAPPVVGGGAP 79
Query: 401 LKPVHTHSQGPVGTRKHNGLGSANPAQKHPSLHHQKQGFKRNHXXXXXXXXXXXXXXXXX 580
P QG VG +K +G G+ NP+ KH L HQK G KRN
Sbjct: 80 PPPQPPVVQGSVGQQKSHGSGNPNPSHKHLPLRHQKPGSKRN---TNGGPPFPVPLPYHQ 136
Query: 581 XXXXXXXXXXXXXHIPICEYPYRPFPGPLPNLDPHMVKSGCEAPIQAFVAPGHGGGVDAS 760
HIP+ Y Y P GPLP++DPH+VKSG E +QAFV P HG +D++
Sbjct: 137 PPMPPVFHSMIVPHIPVSGYAYPPVTGPLPSVDPHLVKSGSETSMQAFVPPVHG--IDSN 194
Query: 761 RGFQPPLRGDPNVYANNIANRRYDVQEPGVRFNQAWRHQRANNPTDNVSXXXXXXXXXXX 940
R QPP RGDPN Y N NRR +QEPG FN AW QR D +
Sbjct: 195 RSVQPPPRGDPNAYIVNFPNRRPSLQEPGGHFNPAWHPQRPLGFRDGIQMQQGMGARAFI 254
Query: 941 XXXXXXX----MNGPSFPGPGSMYYFPAGYPDSXXXXXXXXXXXXXXXXXXXX-SEVLLL 1105
M GP+FPGP S+YY P S SE L
Sbjct: 255 RPPFFGPAPGFMVGPAFPGPASLYYHPPAPTGSIRGPHPRFIPPSLSPGAPIPPSETQAL 314
Query: 1106 SANVVKQIEYYFSNENLQKDHHLLSLMDDQGWVAISKIADFNRVKRMTTDIPFILDALHG 1285
AN+VKQIEYYFS+ NLQ DH+L+SLMDDQGWV IS IADF RVK+M+TD+ FILDAL
Sbjct: 315 RANIVKQIEYYFSDGNLQNDHYLISLMDDQGWVPISIIADFKRVKKMSTDLQFILDALQS 374
Query: 1286 SSVVEVQGNKIRKRDDWSKWIMA 1354
S+ VEVQ ++IR+RD+WS+WI A
Sbjct: 375 STTVEVQCDRIRRRDEWSRWIPA 397
>ref|XP_004149652.1| PREDICTED: la-related protein 1-like [Cucumis sativus]
Length = 881
Score = 443 bits (1139), Expect = e-121
Identities = 238/439 (54%), Positives = 299/439 (68%), Gaps = 5/439 (1%)
Frame = +3
Query: 1854 VNLVERECESLIPVQKRGILSNKRGGLSNDFASEYSGFTGDQNTFMLDEEMELEQPTIRK 2033
+++VE +P Q I SN +D +S++S +TFMLDEE+E+EQ I+K
Sbjct: 446 LDIVEEHSSGTVPPQGIKISSNVGAHDVDDLSSQFS------STFMLDEELEIEQKAIKK 499
Query: 2034 D----HRRIEDEDDEMDGSDRAVQKLMIVTQDPQAVKSDRSSATESDTLSKELASAINDG 2201
D + RI+++DDE+ +D+ VQ+L+IVTQ+ K S ES ++SKELAS INDG
Sbjct: 500 DDLTSNGRIDEDDDEIAVNDQDVQRLIIVTQNRAIEKRSTSGGKESKSISKELASTINDG 559
Query: 2202 LYFYEQELKAKRFNNPRANNGLGMRDRYSRSPSQANGFPNAKVIV-SPGNNVSEENGHVN 2378
LYFYEQ L+ KR N ++ R+ SR S A G +K S G +E G+ +
Sbjct: 560 LYFYEQVLEKKRSNRKKSKCNSENREGTSRLSSSATGSARSKPSENSAGYCGLDEIGNAS 619
Query: 2379 SRRRQNKGANKQQSSHKQRLFSSNNRNPGSVRNLHGITVSESPPSNSVGFFFGSTPPDSY 2558
R++Q K KQQSSHKQR FSSN RN G+ RN GI V+ESPPSNSVGFFFGSTPPDS
Sbjct: 620 PRKKQTKTFPKQQSSHKQRFFSSNFRNHGTSRNSLGI-VAESPPSNSVGFFFGSTPPDST 678
Query: 2559 GPGSSKLXXXXXXXXXXXXXXXXXXXXXFPPFQHPSHQLLEENGFKQQKYVKYHKRCLSD 2738
SKL FPPFQHPSHQLLEENGFKQQKY+K++K+CLSD
Sbjct: 679 SSRPSKLSVSPHGNFLGNSPPVGSLPKSFPPFQHPSHQLLEENGFKQQKYLKFYKKCLSD 738
Query: 2739 RKRLGIGCSEEMNTLYRFWSFFLREEFMRPMYDEFRKLALEDAASKYNYGLECLFRFYSY 2918
RK+LGIGCSEEMNTLYRFWS+FLR+ F+ MY++FRK ALEDAAS YNYG+ECLFRFYSY
Sbjct: 739 RKKLGIGCSEEMNTLYRFWSYFLRDMFVDSMYNDFRKYALEDAASNYNYGMECLFRFYSY 798
Query: 2919 GLERHFREDVYEDFEQITLEFYKKGNLYGLEKYWAFHHFREAREKKASSKSVKKHXXXXX 3098
GLE+ FRE +Y DFEQ+TLEF++KGNLYGLEKYWAFHH+R R++K + ++KH
Sbjct: 799 GLEKEFREVLYSDFEQLTLEFFQKGNLYGLEKYWAFHHYRRQRDQK---EPLRKHPELDK 855
Query: 3099 XXXXXFRCIEDFRAKEKAA 3155
+R ++DFRAKEKAA
Sbjct: 856 LLREEYRSLDDFRAKEKAA 874
Score = 249 bits (637), Expect = 3e-63
Identities = 166/456 (36%), Positives = 222/456 (48%), Gaps = 15/456 (3%)
Frame = +2
Query: 251 SPWKKPAG----DGKGAVMGAESWPALAEARPMTKSLDFTGAAPAPVIKVPEKPLKPVHT 418
SPWK PA D VMGA+SWPALA+A+ KS+D T +A + + + +
Sbjct: 20 SPWKTPAAVDAKDTDAPVMGADSWPALADAQ-RPKSIDATTSAKSSDSGEVSDGVAALQS 78
Query: 419 HSQGPVGTRKHNGLGSANPAQKHPSL--HHQKQGFKRNHXXXXXXXXXXXXXXXXXXXXX 592
S G G S N + H + HHQK G KRN
Sbjct: 79 PSSGAQGGYAQKSPASRNSSYSHKNFQSHHQKPGSKRN--PNGAPHVSVPLPYHQPPMPP 136
Query: 593 XXXXXXXXXHIPICEYPYRPFPGPLPNLDPHMVKSGCEAPIQAFVAPGHGGGVDASRGFQ 772
H+ + Y Y+ P P+ ++ HM+K G E +QAFV P +
Sbjct: 137 LFPPILHPPHLAVPGYAYQ--PRPVAGVEVHMIKPGNETSVQAFVPP-----------VE 183
Query: 773 PPLRGDPNVYANNIANRRYDVQEPGVRFNQAWRHQRANNPTDNVS----XXXXXXXXXXX 940
PP RGDP+ Y I NRR ++QE GV +N W HQR NP DN+S
Sbjct: 184 PPPRGDPSGYVVGIHNRRPNMQESGVHWNHGWHHQRGFNPRDNMSMQHGAGPRPFIRPPF 243
Query: 941 XXXXXXXMNGPSFPGPGSMYYFPAGYPDSXXXXXXXXXXXXXXXXXXXXSEVLLLSANVV 1120
M GPSFPG G MYY P PD+ ++L L N++
Sbjct: 244 FSPAPGFMVGPSFPGHGPMYYVPVPPPDA-IGRPQFIPHPINPRASMLPPDMLALRTNII 302
Query: 1121 KQIEYYFSNENLQKDHHLLSLMDDQGWVAISKIADFNRVKRMTTDIPFILDALHGSSVVE 1300
KQIEYYFS+ENL+ DH+L+SLMDD GWV IS IA+F RVK+M+TDI FILD+LH S+ VE
Sbjct: 303 KQIEYYFSDENLKTDHYLISLMDDHGWVPISAIAEFKRVKKMSTDISFILDSLHSSANVE 362
Query: 1301 VQGNKIRKRDDWSKWIMAYGPNISLSKSQSPLAQEDEKSTITVENSECNARDTDGISEYP 1480
VQG+K+RKRD+WSKW+ + S ++ DE + V+ + + ++
Sbjct: 363 VQGDKVRKRDEWSKWVPVSADSKSTLNVETSSIPVDESTNSLVDENASDGSRVLASNDNI 422
Query: 1481 MESLLDNKSMHEDSLSSKKFP-----NIVPKISSGT 1573
SLL S + SS+ P +IV + SSGT
Sbjct: 423 KSSLLQGCS--REQFSSRDSPEVANLDIVEEHSSGT 456
>ref|XP_004165480.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 1-like [Cucumis
sativus]
Length = 881
Score = 438 bits (1126), Expect = e-120
Identities = 236/439 (53%), Positives = 297/439 (67%), Gaps = 5/439 (1%)
Frame = +3
Query: 1854 VNLVERECESLIPVQKRGILSNKRGGLSNDFASEYSGFTGDQNTFMLDEEMELEQPTIRK 2033
+++VE +P Q I SN +D +S++S +TFMLDEE+E+EQ I+K
Sbjct: 446 LDIVEEHSSGTVPPQGIKISSNVGAHDVDDLSSQFS------STFMLDEELEIEQKAIKK 499
Query: 2034 D----HRRIEDEDDEMDGSDRAVQKLMIVTQDPQAVKSDRSSATESDTLSKELASAINDG 2201
D + RI+++DDE+ +D+ VQ+L+IVTQ+ K S ES ++SKELAS INDG
Sbjct: 500 DDLTSNGRIDEDDDEIAVNDQDVQRLIIVTQNRAIEKRSTSGGKESKSISKELASTINDG 559
Query: 2202 LYFYEQELKAKRFNNPRANNGLGMRDRYSRSPSQANGFPNAKVIV-SPGNNVSEENGHVN 2378
LYFYEQ + KR N ++ R+ SR S A G +K S G +E G+ +
Sbjct: 560 LYFYEQVERKKRSNRKKSKCNSENREGTSRLSSSATGSARSKPSENSAGYCGLDEIGNAS 619
Query: 2379 SRRRQNKGANKQQSSHKQRLFSSNNRNPGSVRNLHGITVSESPPSNSVGFFFGSTPPDSY 2558
R++Q K KQQSSHKQR FSSN RN G+ RN GI V+ESPPSNSV FFFGSTPPDS
Sbjct: 620 PRKKQTKTFPKQQSSHKQRFFSSNFRNHGTSRNSLGI-VAESPPSNSVXFFFGSTPPDST 678
Query: 2559 GPGSSKLXXXXXXXXXXXXXXXXXXXXXFPPFQHPSHQLLEENGFKQQKYVKYHKRCLSD 2738
SKL FPPFQHPSHQLLEENGFKQQKY+K++K+CLSD
Sbjct: 679 SSRPSKLSVSPHGNFLGNSPPVGSLPKSFPPFQHPSHQLLEENGFKQQKYLKFYKKCLSD 738
Query: 2739 RKRLGIGCSEEMNTLYRFWSFFLREEFMRPMYDEFRKLALEDAASKYNYGLECLFRFYSY 2918
RK+LGIGCSEEMNTLYRFWS+FLR+ F+ MY++FRK ALEDAAS YNYG+ECLFRFYSY
Sbjct: 739 RKKLGIGCSEEMNTLYRFWSYFLRDMFVDSMYNDFRKYALEDAASNYNYGMECLFRFYSY 798
Query: 2919 GLERHFREDVYEDFEQITLEFYKKGNLYGLEKYWAFHHFREAREKKASSKSVKKHXXXXX 3098
GLE+ FRE +Y DFEQ+TLEF++KGNLYGLEKYWAFHH+R R++K + ++KH
Sbjct: 799 GLEKEFREVLYSDFEQLTLEFFQKGNLYGLEKYWAFHHYRRQRDQK---EPLRKHPELDK 855
Query: 3099 XXXXXFRCIEDFRAKEKAA 3155
+R ++DFRAKEKAA
Sbjct: 856 LLREEYRSLDDFRAKEKAA 874
Score = 249 bits (637), Expect = 3e-63
Identities = 166/456 (36%), Positives = 222/456 (48%), Gaps = 15/456 (3%)
Frame = +2
Query: 251 SPWKKPAG----DGKGAVMGAESWPALAEARPMTKSLDFTGAAPAPVIKVPEKPLKPVHT 418
SPWK PA D VMGA+SWPALA+A+ KS+D T +A + + + +
Sbjct: 20 SPWKTPAAVDAKDTDAPVMGADSWPALADAQ-RPKSIDATTSAKSSDSGEVSDGVAALQS 78
Query: 419 HSQGPVGTRKHNGLGSANPAQKHPSL--HHQKQGFKRNHXXXXXXXXXXXXXXXXXXXXX 592
S G G S N + H + HHQK G KRN
Sbjct: 79 PSSGAQGGYAQKSPASRNSSYSHKNFQSHHQKPGSKRN--PNGAPHVSVPLPYHQPPMPP 136
Query: 593 XXXXXXXXXHIPICEYPYRPFPGPLPNLDPHMVKSGCEAPIQAFVAPGHGGGVDASRGFQ 772
H+ + Y Y+ P P+ ++ HM+K G E +QAFV P +
Sbjct: 137 LFPPILHPPHLAVPGYAYQ--PRPVAGVEVHMIKPGNETSVQAFVPP-----------VE 183
Query: 773 PPLRGDPNVYANNIANRRYDVQEPGVRFNQAWRHQRANNPTDNVS----XXXXXXXXXXX 940
PP RGDP+ Y I NRR ++QE GV +N W HQR NP DN+S
Sbjct: 184 PPPRGDPSGYVVGIHNRRPNMQESGVHWNHGWHHQRGFNPRDNMSMQHGAGPRPFIRPPF 243
Query: 941 XXXXXXXMNGPSFPGPGSMYYFPAGYPDSXXXXXXXXXXXXXXXXXXXXSEVLLLSANVV 1120
M GPSFPG G MYY P PD+ ++L L N++
Sbjct: 244 FSPAPGFMVGPSFPGHGPMYYVPVPPPDA-IGRPQFIPHPINPRASMLPPDMLALRTNII 302
Query: 1121 KQIEYYFSNENLQKDHHLLSLMDDQGWVAISKIADFNRVKRMTTDIPFILDALHGSSVVE 1300
KQIEYYFS+ENL+ DH+L+SLMDD GWV IS IA+F RVK+M+TDI FILD+LH S+ VE
Sbjct: 303 KQIEYYFSDENLKTDHYLISLMDDHGWVPISAIAEFKRVKKMSTDISFILDSLHSSANVE 362
Query: 1301 VQGNKIRKRDDWSKWIMAYGPNISLSKSQSPLAQEDEKSTITVENSECNARDTDGISEYP 1480
VQG+K+RKRD+WSKW+ + S ++ DE + V+ + + ++
Sbjct: 363 VQGDKVRKRDEWSKWVPVSADSKSTLNVETSSIPVDESTNSLVDENASDGSRVLASNDNI 422
Query: 1481 MESLLDNKSMHEDSLSSKKFP-----NIVPKISSGT 1573
SLL S + SS+ P +IV + SSGT
Sbjct: 423 KSSLLQGCS--REQFSSRDSPEVANLDIVEEHSSGT 456
>ref|XP_002272083.2| PREDICTED: uncharacterized protein LOC100254731 [Vitis vinifera]
Length = 903
Score = 422 bits (1086), Expect = e-115
Identities = 228/371 (61%), Positives = 265/371 (71%), Gaps = 6/371 (1%)
Frame = +3
Query: 1926 GGLSNDFASEYSGFTGDQNTFMLDEEMELEQPTIRK----DHRRIEDEDDEMDGSDRAVQ 2093
G LSNDFAS FMLDEE+E E T +K RRI+DED+EM +D+ V
Sbjct: 544 GDLSNDFASP----------FMLDEELEPEPKTSKKVDLSSTRRIDDEDEEMVVNDQDVH 593
Query: 2094 KLMIVTQDPQAVKSDRSSATESDTLSKELASAINDGLYFYEQELKAKRFNNPRANNGLGM 2273
+L+IVTQ+ + + + A ES ++S ELASAINDGL+FYEQELK K N + +
Sbjct: 594 RLVIVTQNSRTGEGSGNGAQESKSISNELASAINDGLFFYEQELKTKGSNCRKNSFSFEN 653
Query: 2274 RDRYSRSPSQANGFPNAKVIV-SPGNNVSEENGHVNSRRRQNKGANKQQ-SSHKQRLFSS 2447
RD SRS S G NAK S G++ EE G+ NSRR+QNKG KQQ SSHKQR F+S
Sbjct: 654 RDGISRSSSIVPGLVNAKTGENSIGSSGCEEPGNCNSRRKQNKGFPKQQASSHKQRFFTS 713
Query: 2448 NNRNPGSVRNLHGITVSESPPSNSVGFFFGSTPPDSYGPGSSKLXXXXXXXXXXXXXXXX 2627
N RN GS RN GI +SESPPSNSVGFFFGSTPP+++GP SSKL
Sbjct: 714 NFRNHGSGRNSLGI-ISESPPSNSVGFFFGSTPPENHGPRSSKLCISPRGSLSGSSPPVG 772
Query: 2628 XXXXXFPPFQHPSHQLLEENGFKQQKYVKYHKRCLSDRKRLGIGCSEEMNTLYRFWSFFL 2807
FPPFQHPSHQLLEENGFKQQKY+KY KRCLSDRK+LGIGCSEEMNTLYRFWS+FL
Sbjct: 773 SMPKSFPPFQHPSHQLLEENGFKQQKYLKYQKRCLSDRKKLGIGCSEEMNTLYRFWSYFL 832
Query: 2808 REEFMRPMYDEFRKLALEDAASKYNYGLECLFRFYSYGLERHFREDVYEDFEQITLEFYK 2987
R+ F MY EFRK ALEDAA+ YNYG+ECLFRFYSYGLE+ FRED+YEDFEQ+T++FY
Sbjct: 833 RDMFNHSMYKEFRKFALEDAAANYNYGIECLFRFYSYGLEKEFREDLYEDFEQLTIDFYH 892
Query: 2988 KGNLYGLEKYW 3020
KGNLYGLEKYW
Sbjct: 893 KGNLYGLEKYW 903
Score = 308 bits (788), Expect = 9e-81
Identities = 186/435 (42%), Positives = 229/435 (52%), Gaps = 15/435 (3%)
Frame = +2
Query: 251 SPWKKPAGD----GKGAVMGAESWPALAEAR------PMTKSLDFTGAAPAPVIKVPEKP 400
SPWK+P G G G VMGAESWPAL++A+ P K G PAP + P
Sbjct: 22 SPWKRPLGGDAKGGDGPVMGAESWPALSDAQRPKNPGPAAKPPVLAGVRPAPPVVGGGAP 81
Query: 401 LKPVHTHSQGPVGTRKHNGLGSANPAQKHPSLHHQKQGFKRNHXXXXXXXXXXXXXXXXX 580
P QG VG +K +G G+ NP+ KH L HQK G KRN
Sbjct: 82 PPPQPPVVQGSVGQQKSHGSGNPNPSHKHLPLRHQKPGSKRN---TNGGPPFPVPLPYHQ 138
Query: 581 XXXXXXXXXXXXXHIPICEYPYRPFPGPLPNLDPHMVKSGCEAPIQAFVAPGHGGGVDAS 760
HIP+ Y Y P GPLP++DPH+VKSG E +QAFV P HG +D++
Sbjct: 139 PPMPPVFHSMIVPHIPVSGYAYPPVTGPLPSVDPHLVKSGSETSMQAFVPPVHG--IDSN 196
Query: 761 RGFQPPLRGDPNVYANNIANRRYDVQEPGVRFNQAWRHQRANNPTDNVSXXXXXXXXXXX 940
R QPP RGDPN Y N NRR +QEPG FN AW QR D +
Sbjct: 197 RSVQPPPRGDPNAYIVNFPNRRPSLQEPGGHFNPAWHPQRPLGFRDGIQMQQGMGARAFI 256
Query: 941 XXXXXXX----MNGPSFPGPGSMYYFPAGYPDSXXXXXXXXXXXXXXXXXXXX-SEVLLL 1105
M GP+FPGP S+YY P S SE L
Sbjct: 257 RPPFFGPAPGFMVGPAFPGPASLYYHPPAPTGSIRGPHPRFIPPSLSPGAPIPPSETQAL 316
Query: 1106 SANVVKQIEYYFSNENLQKDHHLLSLMDDQGWVAISKIADFNRVKRMTTDIPFILDALHG 1285
AN+VKQIEYYFS+ NLQ DH+L+SLMDDQGWV IS IADF RVK+M+TD+ FILDAL
Sbjct: 317 RANIVKQIEYYFSDGNLQNDHYLISLMDDQGWVPISIIADFKRVKKMSTDLQFILDALQS 376
Query: 1286 SSVVEVQGNKIRKRDDWSKWIMAYGPNISLSKSQSPLAQEDEKSTITVENSECNARDTDG 1465
S+ VEVQ ++IR+RD+WS+WI A + K+ SP + EK+ I EN+E N +T G
Sbjct: 377 STTVEVQCDRIRRRDEWSRWIPASIEHGLPLKANSPQDRVVEKTVIDHENNESNKDNTTG 436
Query: 1466 ISEYPMESLLDNKSM 1510
SE E +N ++
Sbjct: 437 TSEGNCELQSNNGNL 451
>ref|XP_002519615.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223541205|gb|EEF42760.1| lupus la ribonucleoprotein,
putative [Ricinus communis]
Length = 867
Score = 417 bits (1072), Expect = e-113
Identities = 218/370 (58%), Positives = 267/370 (72%), Gaps = 5/370 (1%)
Frame = +3
Query: 1926 GGLSNDFASEYSGFTGDQNTFMLDEEMELEQPTIRKDH----RRIEDEDDEMDGSDRAVQ 2093
G L+NDFA NTFMLDEE+ELE + D RRI+DE+DEM +D VQ
Sbjct: 509 GELANDFA----------NTFMLDEELELEHKIQKNDSVSSIRRIDDEEDEMLVNDPDVQ 558
Query: 2094 KLMIVTQDPQAVKSDRSSATESDTLSKELASAINDGLYFYEQELKAKRFNNPRANNGLGM 2273
+L+IVTQ+ +A + ++ + ES ++SKE A AINDGLYFYEQELK KR N ++++G+
Sbjct: 559 RLVIVTQNSRAGEGIKTGSKESKSISKEQAFAINDGLYFYEQELKTKRCNRRKSSSGVEN 618
Query: 2274 RDRYSRSPSQANGFPNAKVIVSP-GNNVSEENGHVNSRRRQNKGANKQQSSHKQRLFSSN 2450
RD R + A G N+KV S G+ EE+G N+ RRQNK +K QSSHKQR FS N
Sbjct: 619 RDGNLRFTNSALGMSNSKVGESSIGSGGQEESGSSNNLRRQNKSFSKPQSSHKQRFFSCN 678
Query: 2451 NRNPGSVRNLHGITVSESPPSNSVGFFFGSTPPDSYGPGSSKLXXXXXXXXXXXXXXXXX 2630
RN G+ RN GI +SESPPSNSVGFFF STPP+++ P SSKL
Sbjct: 679 FRNHGTGRNSFGI-ISESPPSNSVGFFFSSTPPETHNPRSSKLSASPHSTLSGSSPPVGS 737
Query: 2631 XXXXFPPFQHPSHQLLEENGFKQQKYVKYHKRCLSDRKRLGIGCSEEMNTLYRFWSFFLR 2810
FP FQHPSHQLLEENGFKQQKY+K+HKRCLSDRK++GIGCSEEMNTLYRFWS+FLR
Sbjct: 738 MPKSFPLFQHPSHQLLEENGFKQQKYLKFHKRCLSDRKKMGIGCSEEMNTLYRFWSYFLR 797
Query: 2811 EEFMRPMYDEFRKLALEDAASKYNYGLECLFRFYSYGLERHFREDVYEDFEQITLEFYKK 2990
+ F+ MY+EF K A+EDAA+ YNYG+ECLFRFYSYGLE FRED+Y+DFE++TLEFY+K
Sbjct: 798 DMFVPSMYNEFLKFAMEDAAANYNYGVECLFRFYSYGLESKFREDLYKDFEELTLEFYRK 857
Query: 2991 GNLYGLEKYW 3020
GN+YGLEKYW
Sbjct: 858 GNIYGLEKYW 867
Score = 230 bits (586), Expect = 2e-57
Identities = 155/415 (37%), Positives = 207/415 (49%), Gaps = 6/415 (1%)
Frame = +2
Query: 233 VVSAPMSPWKKPAGDGKGAVMGAESWPALAEARPMTKSLDFTGAAPAPVIKVPEKPLKPV 412
V S SPWK P G VM AESWPAL++A+ + +S A V P
Sbjct: 13 VNSGVKSPWKTPLV-ADGPVMSAESWPALSDAQQLPRSKSADSATKPTVPPAPP------ 65
Query: 413 HTHSQGPVGTRKHNGLGSANPAQKHPSLHHQKQGFKRNHXXXXXXXXXXXXXXXXXXXXX 592
+ +Q G +K +G G+ N + K+ S HQ+ G KRN
Sbjct: 66 -SMNQESAGQQKSHGYGNPNSSHKYSSSRHQRSGSKRN--PNGAPPFPVPFPYQQPALPP 122
Query: 593 XXXXXXXXXHIPICEYPYRPFPGPLPNLDPHMVKSGCE-APIQAFVAPGHGGGVDASRGF 769
HI + Y Y+P P P P+++ H+VKS + + +Q+F P +
Sbjct: 123 VFHAMVPPPHITVPGYAYQPGPAPFPSVEAHLVKSVSDSSTVQSFAQPVN---------V 173
Query: 770 QPPLRGDPNVYANNIANRRYDVQEPGVRFNQAWRHQRANNPTDNVS----XXXXXXXXXX 937
QPP RGDPN YA N +RR VQEPG N AW H R+ +P DN++
Sbjct: 174 QPPPRGDPNAYAVNF-SRRPSVQEPGSHLNHAW-HHRSFSPRDNIAFQQGMGSRPLVRPP 231
Query: 938 XXXXXXXXMNGPSFPGPGSMYYFPAGYPDS-XXXXXXXXXXXXXXXXXXXXSEVLLLSAN 1114
M GP+FPGP + YFP P S + L +
Sbjct: 232 YFTTAPGFMVGPTFPGP-PICYFPVAPPGSFRGGHPAVFMPYPTSPGAPIPPQESSLRDD 290
Query: 1115 VVKQIEYYFSNENLQKDHHLLSLMDDQGWVAISKIADFNRVKRMTTDIPFILDALHGSSV 1294
+++QIEYYFS+ENL+ DH L+SLMDDQGWV IS IA F RVK+MTTD+ ILDAL SS
Sbjct: 291 IIRQIEYYFSDENLRTDHFLISLMDDQGWVPISAIAKFKRVKKMTTDVVIILDALQSSST 350
Query: 1295 VEVQGNKIRKRDDWSKWIMAYGPNISLSKSQSPLAQEDEKSTITVENSECNARDT 1459
+EVQG+KIR+RD+WSKWI A + S++Q+ +Q E + +E NAR T
Sbjct: 351 IEVQGDKIRRRDEWSKWIAASIEHTLPSQTQTSESQPVEPA------NEGNARAT 399