BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003900
         (3118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74990.1| hypothetical protein VITISV_008657 [Vitis vinifera]   431   e-118
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]   400   e-109
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...   397   e-108
ref|XP_002329317.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-97
ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase,...   350   1e-93

>emb|CAN74990.1| hypothetical protein VITISV_008657 [Vitis vinifera]
          Length = 1140

 Score =  431 bits (1109), Expect = e-118
 Identities = 256/561 (45%), Positives = 353/561 (62%), Gaps = 31/561 (5%)
 Frame = +3

Query: 906  LVTQDYVQRELEELRLNKESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQN 1085
            L TQDY+QRE E L+L KESF A M+HE+SVLS+KAQSE   M+   +L K ELE D+QN
Sbjct: 563  LATQDYIQREFESLKLAKESFAASMEHEQSVLSEKAQSEKSQMIHDFELLKRELETDIQN 622

Query: 1086 KREEMEKILSERERAFEEQKERDLSNINYLREVAGREMEDMKLQRIKFEKEKQKLAADKE 1265
            ++EE+EK L ERE+ FEE++ER+L+N+NYLREVA +EME++KL+R++ EKEKQ++AA+K+
Sbjct: 623  RQEELEKQLQEREKVFEEERERELNNVNYLREVARQEMEEVKLERLRIEKEKQEVAANKK 682

Query: 1266 HLAGQQLDMRTDIDKLDVLIKNIRNQ-------RAQFKLFIEKYKSCKNCGETISDFILS 1424
            HL   Q +MR DID+L  L + +++Q       R +F  F+E+ KSCKNCGE   +F+LS
Sbjct: 683  HLDEHQFEMRKDIDELVSLSRKLKDQRELFSKERERFIAFVEQQKSCKNCGEITCEFVLS 742

Query: 1425 DLNSLQNMEDFGALPSPRRAEHYLE-NMQGSLAASVTPNTDESPLGSGSGFATSGGRVSW 1601
            DL  L  +E+    P PR A+ Y + ++QG++AAS   N + +P   GSG  TSGG +S+
Sbjct: 743  DLQPLPEIENVEVPPLPRLADRYFKGSVQGNMAASERQNIEMTPGIVGSGSPTSGGTISF 802

Query: 1602 ILKKCGPKISKILNLSPLTKSRDAVAEGLTDDSPQLIMQVETETSNRLEGTEIAQDPSFG 1781
             L+KC    SKI NLSP  K   A  + LT ++P+   Q   E S RL  TE   +PSF 
Sbjct: 803  -LRKC---TSKIFNLSPGKKIEVAAIQNLT-EAPEPSRQAIVEPSKRLGSTEDEPEPSFR 857

Query: 1782 IPSESFDDQRILLGESLRDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKNGRAKRGKK 1961
            I ++SFD QRI    S+++V A    SIDE  +IDS ++ +   SQHS+LK  R K GK+
Sbjct: 858  IANDSFDVQRIQSDNSIKEVEAGQDLSIDES-NIDSKALELQQHSQHSDLKGARRKPGKR 916

Query: 1962 RTAGVKRTHSVKEVVEDAKLFLGESLEPKEGMQQNGNAEDSVYAN-EGRDDSSFADKRTV 2138
                + RT SVK VV DAK  LGESLE  E    NGN EDS + N E R +SSFADK T 
Sbjct: 917  SKQRIHRTRSVKAVVRDAKAILGESLELSENEHPNGNPEDSAHMNDESRGESSFADKGTP 976

Query: 2139 GAGRKRNNAHASRSTVSEQEVDENDTRSESVTAGGRKKRRPNVASGLQTPGEKRYNLRRP 2318
              GRKR  A+ S++ VSEQ+ D+++ RS+SV A  + KRR  V   +QT G++RYNLRRP
Sbjct: 977  RNGRKRQRAYTSQTMVSEQDGDDSEGRSDSVMARRQGKRRQKVPPAVQTLGQERYNLRRP 1036

Query: 2319 RPLGTTAATQASSDFAKVKQKVAEGD----------------------LDAKEESRHLGQ 2432
            +   T AA ++S++  K K+   +G                       +     S H+ Q
Sbjct: 1037 KNTVTVAAAKSSTNLHKRKETETDGSGAGGTGEEIPDCNAAPATSVGLISENGGSTHVLQ 1096

Query: 2433 VTAMKAVEEVHEFTSDRIVRF 2495
            V   + + +VH F SD++VR+
Sbjct: 1097 VETFETIVDVH-FPSDKVVRW 1116



 Score =  198 bits (503), Expect = 9e-48
 Identities = 111/232 (47%), Positives = 146/232 (62%)
 Frame = +2

Query: 56   EVEAIRKNLELKNTELLALEENLSVRERVGIQKLVDEHNAFLESKKHEFELEMDLKRKGL 235
            E +A+R++LE+K  ELL LEE L  RERV IQKLVDEHN  L++KK EFELE++ KRK L
Sbjct: 306  ETDAVRQSLEIKEKELLELEEKLCARERVEIQKLVDEHNIILDAKKREFELEIEQKRKSL 365

Query: 236  DEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXXXXXXXXXXXXXXXXXMKKSI 415
            +EE++SK ++VEKKETE NH E K+ KR                            +KSI
Sbjct: 366  EEELKSKVVEVEKKETEFNHMEAKVAKREQALEKKLEKFKEKEKEFESKSKALKEKEKSI 425

Query: 416  KVEEKNLEMARTQKVIDEENLKNLIAELEKRKADIXXXXXXXXXXXXXXXITEEQRAEHL 595
            + EEKNLE  +   + D+E+L +L A  EK + +I               ITEE+R+E L
Sbjct: 426  RAEEKNLEAEKKHILADKEDLLSLKAVAEKIRVEIEEQKLKVHEEREQLEITEEERSEFL 485

Query: 596  RLKSHLKQDIENNKHQEGLLLKERDNLKQDRENFEKEWEVLDEKRAEITKDL 751
            RL+S LKQ+IE  + ++ +LLKE ++LK  RE FE+EWEVLDEK AEI KDL
Sbjct: 486  RLQSELKQEIEKYRLEKEVLLKEVEDLKLQRETFEREWEVLDEKXAEIEKDL 537


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score =  400 bits (1029), Expect = e-109
 Identities = 263/641 (41%), Positives = 369/641 (57%), Gaps = 37/641 (5%)
 Frame = +3

Query: 906  LVTQDYVQRELEELRLNKESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQN 1085
            L  ++++QRELE +R+ KESF A+M HE+  LS+KAQ++H  MLR  +L+K +LE +MQN
Sbjct: 623  LAMEEHIQRELEAVRIEKESFAAIMKHEQVTLSEKAQNDHSQMLRDFELRKRDLEIEMQN 682

Query: 1086 KREEMEKILSERERAFEEQKERDLSNINYLREVAGREMEDMKLQRIKFEKEKQKLAADKE 1265
            +++E++K L ERERAFEE++ER+L+NIN+L+EVA RE+E+MK +R + EKEKQ++  +K 
Sbjct: 683  RQDEIQKRLQERERAFEEERERELNNINHLKEVARREIEEMKTERRRIEKEKQEVLLNKR 742

Query: 1266 HLAGQQLDMRTDIDKLDVLIKNIRNQRAQ-------FKLFIEKYKSCKNCGETISDFILS 1424
             L G QL+MR DID+L +L + +++QR Q       F  F++K+K+CKNCGE   +F+L+
Sbjct: 743  QLEGHQLEMRKDIDELGILSRKLKDQREQFIKERDRFLTFVDKHKTCKNCGEITREFVLN 802

Query: 1425 DLNSLQNMEDFGALPSPRRAEHYLENMQGSLAASVTPN----TDESPLGSGSGFATSGGR 1592
            DL  L  ME   A P P  A+ +L + QG++AAS   N    T E  L S      SGGR
Sbjct: 803  DL-QLPEME-VEAFPLPNLADEFLNSPQGNMAASDGTNVKIXTGEIDLVSSG----SGGR 856

Query: 1593 VSWILKKCGPKISKILNLSPLTKSRDAVAEGLTDDSPQLIMQVETETSN--RLEGTEIAQ 1766
            +S+ L+KC    +KI NLSP  KS     + L ++SP L +QV  E +    + G  IA+
Sbjct: 857  MSF-LRKCA---TKIFNLSPSKKSEHVGVQVLREESPLLDLQVNLEKAEGPSIVGQSIAE 912

Query: 1767 D---PSFGIPSESFDDQRILLGESLRDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKN 1937
            D   PSFGI ++SFD Q++     +R+V    AQS+D   ++ S     P DSQ SELK+
Sbjct: 913  DELEPSFGIANDSFDIQQLHSDSVMREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKS 972

Query: 1938 GRAKRGKKRTAGVKRTHSVKEVVEDAKLFLGESLEPKEGMQQNGNAEDSVYAN-EGRDDS 2114
            GR K G+KR  GV RT SVK V                 +  +    DS Y N EG  ++
Sbjct: 973  GRRKPGRKRRTGVHRTRSVKNV-----------------LNGDERPNDSTYTNEEGERET 1015

Query: 2115 SFADKRTVGAGRKRNNAHASRSTVSEQEVDENDTRSESVTAGGRKKRRPNVASGLQTPGE 2294
            S A+K      RKR  A +SR T SEQ+  +++ RS+SVTAGGR KRR  VA  +QTPGE
Sbjct: 1016 SHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQTVAPVVQTPGE 1075

Query: 2295 KRYNLRRPRPLGTTAATQASSDFAKVKQKVAEGDLDAKEESR------------------ 2420
            KRYNLRR +  GT A  QAS++  K  +K  +G  D   +++                  
Sbjct: 1076 KRYNLRRHKTAGTVATAQASANLPKRDEKGGDGGDDNTLQTKANPKAASSPSLADSDNPK 1135

Query: 2421 --HLGQVTAMKAVEEVHEFTSDRIVRFDTVTENDGGIVCETKSTGNIESSGEVNETEDCT 2594
               L  VT +K+V E+ E++ DR+VRF TV +  GG     +   N+E   E+      T
Sbjct: 1136 TTPLVHVTTLKSV-EIREYSPDRVVRFKTV-DIVGGNNDSARLAENMELRQEIPGNPGDT 1193

Query: 2595 AGYVNEDGFESDVXXXXXXXXXXXXXXXXXXXXASIGKKLW 2717
             GY +E+G  S                      ASIGKKLW
Sbjct: 1194 PGYEDENGSMS-----HEEDDNSDEDESEHPGDASIGKKLW 1229



 Score =  218 bits (555), Expect = 8e-54
 Identities = 119/252 (47%), Positives = 160/252 (63%)
 Frame = +2

Query: 2    MKEDDINRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSVRERVGIQKLVDEHNAFL 181
            +KEDDIN RL +L  KE + E++R  LE+K  EL+ L+E LS RERV IQKL+DEH A L
Sbjct: 348  VKEDDINNRLAELTVKEKQAESMRGILEVKEKELIVLQEKLSARERVEIQKLLDEHRAIL 407

Query: 182  ESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXXXX 361
            ++KK EFELEM+ KR  +DEE+RSK  +VE+KE E  HREEK+ KR              
Sbjct: 408  DTKKQEFELEMEQKRNSVDEELRSKVHEVEQKEVEVLHREEKLGKREQALEKRLERVKEK 467

Query: 362  XXXXXXXXXXXXXMKKSIKVEEKNLEMARTQKVIDEENLKNLIAELEKRKADIXXXXXXX 541
                          +KS+K EEK +E  + Q + D+E+L  L  ELEK +ADI       
Sbjct: 468  EKELEAKLKTLKEKEKSLKAEEKRVEGEKKQMLADKESLHLLKDELEKIRADITEQELQI 527

Query: 542  XXXXXXXXITEEQRAEHLRLKSHLKQDIENNKHQEGLLLKERDNLKQDRENFEKEWEVLD 721
                    +TEE+R+EH RL+  LKQ+I+  +HQE +L KER++LKQ+R  FEK+WE LD
Sbjct: 528  HEETERLKVTEEERSEHHRLQLELKQEIDKCRHQEEMLQKEREDLKQERIMFEKDWEALD 587

Query: 722  EKRAEITKDLKQ 757
            EKRA ITK++++
Sbjct: 588  EKRAVITKEMRE 599


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score =  397 bits (1021), Expect = e-108
 Identities = 263/637 (41%), Positives = 366/637 (57%), Gaps = 33/637 (5%)
 Frame = +3

Query: 906  LVTQDYVQRELEELRLNKESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQN 1085
            L  ++++QRELE +R+ KESF A+M HE                   QL+K +LE +MQN
Sbjct: 605  LAMEEHIQRELEAVRIEKESFAAIMKHE-------------------QLRKRDLEIEMQN 645

Query: 1086 KREEMEKILSERERAFEEQKERDLSNINYLREVAGREMEDMKLQRIKFEKEKQKLAADKE 1265
            +++E++K L ERERAFEE++ER+L+NIN+L+EVA RE+E+MK +R + EKEKQ++  +K 
Sbjct: 646  RQDEIQKRLQERERAFEEERERELNNINHLKEVARREIEEMKTERRRIEKEKQEVLLNKR 705

Query: 1266 HLAGQQLDMRTDIDKLDVLIKNIRNQRAQ-------FKLFIEKYKSCKNCGETISDFILS 1424
             L G QL+MR DID+L +L + +++QR Q       F  F++K+K+CKNCGE   +F+L+
Sbjct: 706  QLEGHQLEMRKDIDELGILSRKLKDQREQFIKERDRFLTFVDKHKTCKNCGEITREFVLN 765

Query: 1425 DLNSLQNMEDFGALPSPRRAEHYLENMQGSLAASVTPNTDESPLGSGSGFATSGGRVSWI 1604
            DL  L  ME   A P P  A+ +L + QG++AAS   N   S        + SGGR+S+ 
Sbjct: 766  DL-QLPEME-VEAFPLPNLADEFLNSPQGNMAASDGTNVKISTGEIDLVSSGSGGRMSF- 822

Query: 1605 LKKCGPKISKILNLSPLTKSRDAVAEGLTDDSPQLIMQVETETSN--RLEGTEIAQD--- 1769
            L+KC    +KI NLSP  KS     + L ++SP L +QV  E +    + G  IA+D   
Sbjct: 823  LRKCA---TKIFNLSPSKKSEHVGVQVLREESPLLDLQVNLEKAEGPSIVGQSIAEDELE 879

Query: 1770 PSFGIPSESFDDQRILLGESLRDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKNGRAK 1949
            PSFGI ++SFD Q++     +R+V    AQS+D   ++ S     P DSQ SELK+GR K
Sbjct: 880  PSFGIANDSFDIQQLHSDSVMREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGRRK 939

Query: 1950 RGKKRTAGVKRTHSVKEVVEDAKLFLGESLEPKEGMQQNGNAEDSVYAN-EGRDDSSFAD 2126
             G+KR  GV RT SVK VVEDAK FLGE+ E  E +  +    DS Y N EG  ++S A+
Sbjct: 940  PGRKRRTGVHRTRSVKNVVEDAKAFLGETPEIPE-LNGDERPNDSTYTNEEGERETSHAE 998

Query: 2127 KRTVGAGRKRNNAHASRSTVSEQEVDENDTRSESVTAGGRKKRRPNVASGLQTPGEKRYN 2306
            K      RKR  A +SR T SEQ+  +++ RS+SVTAGGR KRR  VA  +QTPGEKRYN
Sbjct: 999  KAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQTVAPVVQTPGEKRYN 1058

Query: 2307 LRRPRPLGTTAATQASSDFAKVKQKVAEGDLDAKEESR--------------------HL 2426
            LRR +  GT A  QAS++  K  +K  +G  D   +++                     L
Sbjct: 1059 LRRHKTAGTVATAQASANLPKRDEKGGDGGDDNTLQTKANPKAASSPSLADSDNPKTTPL 1118

Query: 2427 GQVTAMKAVEEVHEFTSDRIVRFDTVTENDGGIVCETKSTGNIESSGEVNETEDCTAGYV 2606
              VT +K+V E+ E++ DR+VRF TV +  GG     +   N+E   E+      T GY 
Sbjct: 1119 VHVTTLKSV-EIREYSPDRVVRFKTV-DIVGGNNDSARLAENMELRQEIPGNPGDTPGYE 1176

Query: 2607 NEDGFESDVXXXXXXXXXXXXXXXXXXXXASIGKKLW 2717
            +E+G  S                      ASIGKKLW
Sbjct: 1177 DENGSMS-----HEEDDNSDEDESEHPGDASIGKKLW 1208



 Score =  218 bits (555), Expect = 8e-54
 Identities = 119/252 (47%), Positives = 160/252 (63%)
 Frame = +2

Query: 2    MKEDDINRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSVRERVGIQKLVDEHNAFL 181
            +KEDDIN RL +L  KE + E++R  LE+K  EL+ L+E LS RERV IQKL+DEH A L
Sbjct: 330  VKEDDINNRLAELTVKEKQAESMRGILEVKEKELIVLQEKLSARERVEIQKLLDEHRAIL 389

Query: 182  ESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXXXX 361
            ++KK EFELEM+ KR  +DEE+RSK  +VE+KE E  HREEK+ KR              
Sbjct: 390  DTKKQEFELEMEQKRNSVDEELRSKVHEVEQKEVEVLHREEKLGKREQALEKRLERVKEK 449

Query: 362  XXXXXXXXXXXXXMKKSIKVEEKNLEMARTQKVIDEENLKNLIAELEKRKADIXXXXXXX 541
                          +KS+K EEK +E  + Q + D+E+L  L  ELEK +ADI       
Sbjct: 450  EKELEAKLKTLKEKEKSLKAEEKRVEGEKKQMLADKESLHLLKDELEKIRADITEQELQI 509

Query: 542  XXXXXXXXITEEQRAEHLRLKSHLKQDIENNKHQEGLLLKERDNLKQDRENFEKEWEVLD 721
                    +TEE+R+EH RL+  LKQ+I+  +HQE +L KER++LKQ+R  FEK+WE LD
Sbjct: 510  HEETERLKVTEEERSEHHRLQLELKQEIDKCRHQEEMLQKEREDLKQERIMFEKDWEALD 569

Query: 722  EKRAEITKDLKQ 757
            EKRA ITK++++
Sbjct: 570  EKRAVITKEMRE 581


>ref|XP_002329317.1| predicted protein [Populus trichocarpa] gi|222870771|gb|EEF07902.1|
            predicted protein [Populus trichocarpa]
          Length = 1156

 Score =  363 bits (932), Expect = 2e-97
 Identities = 247/614 (40%), Positives = 352/614 (57%), Gaps = 12/614 (1%)
 Frame = +3

Query: 912  TQDYVQRELEELRLNKESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQNKR 1091
            T++Y++RELE L++ KESFEA M+HERSV+++KAQ+E   ML ++++QK ELE ++Q ++
Sbjct: 578  TENYIKRELEALQVAKESFEANMEHERSVMAEKAQNERNQMLHSIEMQKTELENELQKRQ 637

Query: 1092 EEMEKILSERERAFEEQKERDLSNINYLREVAGREMEDMKLQRIKFEKEKQKLAADKEHL 1271
            EEM+++L E+E+ FEE++ER+  NIN+LR+VA REMEDMKL+R++ EKEKQ++   K HL
Sbjct: 638  EEMDRLLQEKEKLFEEEREREFKNINFLRDVARREMEDMKLERLRIEKEKQEVDEKKRHL 697

Query: 1272 AGQQLDMRTDIDKLDVLIKNIRNQRAQ-------FKLFIEKYKSCKNCGETISDFILSDL 1430
              QQ++MR DIDKL  L + +++ R Q       F +F+E+ K CKNCGE  S+F+LSDL
Sbjct: 698  QEQQIEMREDIDKLGNLSRKLKDHREQFIKEKERFIVFVEQNKGCKNCGELTSEFVLSDL 757

Query: 1431 NSLQNMEDFGALPSPRRAEHYLENMQGSLAASVTPNTDESPLGSGSGFATSGGRVSWILK 1610
             S Q +E   ALP+ +   +++    G+ AAS   +++ SP       A S   VSW L+
Sbjct: 758  ISSQEIEKADALPTSKLVNNHVTTDDGNPAASEKHDSEMSPT-----LAHSVSPVSW-LR 811

Query: 1611 KCGPKISKILNLSPLTKSRDAVAEGLTDDSPQLIMQVET-ETSNRLEGTEIAQDPSFGIP 1787
            KC    SKIL  S   +   A  + LTD +P    QV   E S RL+ TE   + SF I 
Sbjct: 812  KC---TSKILKFSAGKRIEPAALQNLTDGTPLSGEQVNAEEMSKRLDFTENEPELSFAIV 868

Query: 1788 SESFDDQRILLGESLRDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKNG--RAKRGKK 1961
            ++S D QR+L   S+R+V A    SI++Q + + T+  +  DSQ S LK+     KRG+ 
Sbjct: 869  NDSLDAQRVLSDTSIREVEAGHDLSINDQSNNNGTAPEIQEDSQPSGLKHDPQPRKRGRP 928

Query: 1962 RTAGVKRTHSVKEVVEDAKLFLGESLEPKEGMQQNGNAEDSVY-ANEGRDDSSFADKRTV 2138
            R   V RT SVKEVV+DAK  LG +LE  E       AEDS +  +E RD+SS ADK   
Sbjct: 929  R---VSRTRSVKEVVQDAKALLGGALELNE-------AEDSGHLKSESRDESSLADKGGP 978

Query: 2139 GAGRKRNNAHASRSTVSEQEVDENDTRSESVTAGGRKKRRPNVASGLQTPGEKRYNLRRP 2318
               RKRN    S+ +VS++  D+++  S+SVTAG R+KRR  V    QT G+ +YNLRR 
Sbjct: 979  RNARKRNRTQTSQISVSDRYGDDSEGHSDSVTAGDRRKRRQKVVPN-QTQGQTQYNLRR- 1036

Query: 2319 RPLGTTAAT-QASSDFAKVKQKVAEGDLDAKEESRHLGQVTAMKAVEEVHEFTSDRIVRF 2495
            R LG    T +ASS+    K+K  +G + + ++   L    A  A        S    R 
Sbjct: 1037 RELGVAVVTVKASSNLNNEKEKEDDG-VSSPQDGNLLRSAPAASAGAASENGESMHFARC 1095

Query: 2496 DTVTENDGGIVCETKSTGNIESSGEVNETEDCTAGYVNEDGFESDVXXXXXXXXXXXXXX 2675
              + +   G     +   N   S E+N T +  AG  ++D  ES                
Sbjct: 1096 ANIMDTLDGDGSARRMDENAALSEEINGTPE-GAGEYDDDEEES---------------- 1138

Query: 2676 XXXXXXASIGKKLW 2717
                   SIGKKLW
Sbjct: 1139 -LHPGEVSIGKKLW 1151



 Score =  203 bits (517), Expect = 2e-49
 Identities = 116/256 (45%), Positives = 155/256 (60%), Gaps = 6/256 (2%)
 Frame = +2

Query: 5    KEDDINRRLVDLVAKEG------EVEAIRKNLELKNTELLALEENLSVRERVGIQKLVDE 166
            KEDDI+ RL +L  KE       E +A RK LE+K  EL  LEE L+ RERV I+KL DE
Sbjct: 296  KEDDISNRLTNLTIKEKACFFFTEFDATRKKLEVKEVELRVLEEKLNERERVEIKKLTDE 355

Query: 167  HNAFLESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXX 346
            HNA L+ KKHEFELE + K+K LDE++++K +++EK+ETE NH+EEK  KR         
Sbjct: 356  HNAILDVKKHEFELEAEQKKKSLDEDLKNKVIELEKRETEINHKEEKAAKREQALDKKLE 415

Query: 347  XXXXXXXXXXXXXXXXXXMKKSIKVEEKNLEMARTQKVIDEENLKNLIAELEKRKADIXX 526
                               +K+I+ E+KNLE  + Q    +EN  NL AELEK +A    
Sbjct: 416  KCKEKENEFESKSKSLKEREKAIRSEQKNLEGEKNQLESAKENFLNLKAELEKTRASNEE 475

Query: 527  XXXXXXXXXXXXXITEEQRAEHLRLKSHLKQDIENNKHQEGLLLKERDNLKQDRENFEKE 706
                         ++EE+R+E+ RL++ LK++I   + QE LLLKE D+LKQ + NFE+E
Sbjct: 476  QLLKIHEEKERLKVSEEERSEYARLQAELKEEINKCRLQEELLLKEADDLKQQKGNFERE 535

Query: 707  WEVLDEKRAEITKDLK 754
            WE LDEKRAE  K+LK
Sbjct: 536  WEDLDEKRAEAEKELK 551


>ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
            communis] gi|223534701|gb|EEF36393.1| DNA double-strand
            break repair rad50 ATPase, putative [Ricinus communis]
          Length = 1163

 Score =  350 bits (898), Expect = 1e-93
 Identities = 250/634 (39%), Positives = 348/634 (54%), Gaps = 33/634 (5%)
 Frame = +3

Query: 915  QDYVQRELEELRLNKESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQNKRE 1094
            +DYV RE E L + KESFEA M+HERS L++KA SE + ML   +LQK EL  D+Q K+E
Sbjct: 586  EDYVIREREALEIAKESFEANMEHERSALAEKALSERQQMLHEFELQKSELGNDLQIKQE 645

Query: 1095 EMEKILSERERAFEEQKERDLSNINYLREVAGREMEDMKLQRIKFEKEKQKLAADKEHLA 1274
             MEK+L E+E+ FEE+KER+L NIN+LR++A REME+MK +R++ EKE+Q++  +K+HL 
Sbjct: 646  GMEKVLQEKEKLFEEEKERELKNINFLRDLARREMEEMKFERLRIEKERQEIEENKKHLQ 705

Query: 1275 GQQLDMRTDIDKLDVLIKNIRNQRAQFK-------LFIEKYKSCKNCGETISDFILSDLN 1433
             QQL+MR DIDKL  L K +++ R QF        LF+E++KSCKNCGE  S+F+LSDL 
Sbjct: 706  EQQLEMRDDIDKLGDLSKKLKDHREQFVKEKERFILFVEQHKSCKNCGEITSEFVLSDLI 765

Query: 1434 SLQNMEDFGALPSPRRAEHYLENMQGSLAASVTPNTDESPLGSGSGFATSGGRVSWILKK 1613
            S Q +E    LP+    +    N   +LAA+   + D SP         S   VSW L+K
Sbjct: 766  SSQEIEKAVLLPNQGLIQSATGNCNQNLAATAVQDNDISP-----SAGRSASPVSW-LRK 819

Query: 1614 CGPKISKILNLSPLTKSRDAVAEGLTDDSPQLIMQVETETSNRLEGTEIAQDPSFGIPSE 1793
            C    SKI + SP  K   A  + LT     L+ +   E S RL+ T    + SF I ++
Sbjct: 820  C---TSKIFSFSPGNKMEPAAVQNLT---APLLAEDREEPSKRLDFTAHEPELSFTIGND 873

Query: 1794 SFDDQRILLGESLRDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKNGRA--KRGKKRT 1967
            S D QRI    S+R+  A    SID++ +I++ ++ VP  +Q S +K GR   KRG+ R 
Sbjct: 874  SLDVQRIQSDSSIREAEAVQDFSIDDKSNINNEAIQVPEGTQPSNVKLGRQIHKRGRPR- 932

Query: 1968 AGVKRTHSVKEVVEDAKLFLGESLEPKEGMQQNGNAEDSVYAN-EGRDDSSFADKRTVGA 2144
              V RT S+K VV+DAK  LGESLE       N   EDS +   E R +S+ AD++    
Sbjct: 933  --VSRTRSMKAVVQDAKAILGESLE------LNTETEDSSHLKAESRGESNLADEKISRN 984

Query: 2145 GRKRNNAHASRSTVSEQ---EVDENDTRSESVTAGGRKKRRPNVASGLQTPGEKRYNLRR 2315
             RKR +  AS++TVSE    + DE++  S+S+TAG R+KR+  VA  +QTPGEKRYNLRR
Sbjct: 985  ARKRKSTRASQNTVSEHGDGDGDESEGHSDSITAGKRRKRQQKVAI-VQTPGEKRYNLRR 1043

Query: 2316 P----RPLG----------------TTAATQASSDFAKVKQKVAEGDLDAKEESRHLGQV 2435
            P    +PL                 +T     +   A+ +Q     D DA + +R+L + 
Sbjct: 1044 PKKGAKPLSDIGREDKEEGGVRGPTSTGIASENGGNARFEQLEVVSDTDA-DSTRNLVEY 1102

Query: 2436 TAMKAVEEVHEFTSDRIVRFDTVTENDGGIVCETKSTGNIESSGEVNETEDCTAGYVNED 2615
             A+   EEV+             T ++GG     +   +    G+ ++ ED       ED
Sbjct: 1103 AALS--EEVNG------------TPDEGGEFGVAEEYRSESHRGDEDDEED-------ED 1141

Query: 2616 GFESDVXXXXXXXXXXXXXXXXXXXXASIGKKLW 2717
              ES                      ASIGKKLW
Sbjct: 1142 EDES-----------------VHPGEASIGKKLW 1158



 Score =  202 bits (513), Expect = 6e-49
 Identities = 116/250 (46%), Positives = 151/250 (60%)
 Frame = +2

Query: 5    KEDDINRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSVRERVGIQKLVDEHNAFLE 184
            KED++  RL +L  KE E +A  K LE+K  +L +LEE+L+ RE+V IQKL+DEH A LE
Sbjct: 309  KEDEMTIRLANLTLKEKEFDATGKKLEMKEEKLRSLEESLNDREKVEIQKLIDEHTAILE 368

Query: 185  SKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXXXXX 364
             KK EFELE D KRK LDEE+++K  +VEKKE E  H E+K+ KR               
Sbjct: 369  VKKREFELEADQKRKSLDEELKNKVNEVEKKEAEIKHMEDKVLKREQALDKKLDKLKEKE 428

Query: 365  XXXXXXXXXXXXMKKSIKVEEKNLEMARTQKVIDEENLKNLIAELEKRKADIXXXXXXXX 544
                         +K+IK EEKNLE  + Q   D+EN  NL AELEK +A          
Sbjct: 429  KEFESKSKALKEKEKTIKSEEKNLENEKRQLNSDKENFLNLKAELEKIRAANEEQLLKIR 488

Query: 545  XXXXXXXITEEQRAEHLRLKSHLKQDIENNKHQEGLLLKERDNLKQDRENFEKEWEVLDE 724
                   + EE+R E++RL+S LK++IE  + QE L LKE ++LKQ +ENFE+EW+ LDE
Sbjct: 489  EEKDQLKVNEEERVEYVRLQSELKEEIEKCRLQEQLFLKEVEDLKQQKENFEREWDDLDE 548

Query: 725  KRAEITKDLK 754
            KR EI K LK
Sbjct: 549  KRVEIEKQLK 558