BLASTX nr result

ID: Coptis23_contig00003896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003896
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265500.2| PREDICTED: putative amidohydrolase ytcJ-like...   253   4e-65
ref|XP_002513056.1| Exoenzymes regulatory protein aepA precursor...   242   6e-62
ref|XP_002304801.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
ref|XP_002878048.1| LAF3/LAF3 ISF1/LAF3 ISF2 [Arabidopsis lyrata...   234   2e-59
ref|XP_003541592.1| PREDICTED: putative amidohydrolase ytcJ-like...   233   4e-59

>ref|XP_002265500.2| PREDICTED: putative amidohydrolase ytcJ-like [Vitis vinifera]
           gi|296090331|emb|CBI40150.3| unnamed protein product
           [Vitis vinifera]
          Length = 578

 Score =  253 bits (645), Expect = 4e-65
 Identities = 125/176 (71%), Positives = 143/176 (81%), Gaps = 6/176 (3%)
 Frame = +1

Query: 1   GTSNGYSDRRFRIEHSQHLAPGAAARFGQQKIIASVQPEHLLDDAGSLAKKLGVARAEKE 180
           G++NG  DRRFRIEH+QHL PG+ ARFG+Q I+ASVQP+HLLDDA S  KKLGV RA+KE
Sbjct: 402 GSTNGMRDRRFRIEHAQHLVPGSTARFGEQGIVASVQPDHLLDDADSAIKKLGVERAQKE 461

Query: 181 SYLFQSLLASNALLAFGSDWPVAKMNPLGAIKTATKRIPPGWEKPWVPSECVSLSDALNA 360
           SYLF+SLLASNA LAFGSDWPVA +NPLG+IK A KRIPPGWE  W+ SEC++L DALNA
Sbjct: 462 SYLFRSLLASNAQLAFGSDWPVADINPLGSIKAAMKRIPPGWESAWISSECLTLHDALNA 521

Query: 361 HTISAAYASFLDQQLGSLSPGKLADFVVLSADTW------AKPEVEATYVSGKQAY 510
           +TISAA ASFLD  LGSLSPGK+ADFVVLS D+W          VEAT+V G QAY
Sbjct: 522 YTISAARASFLDNDLGSLSPGKMADFVVLSTDSWDDFAAEGSASVEATFVGGLQAY 577


>ref|XP_002513056.1| Exoenzymes regulatory protein aepA precursor, putative [Ricinus
           communis] gi|223548067|gb|EEF49559.1| Exoenzymes
           regulatory protein aepA precursor, putative [Ricinus
           communis]
          Length = 574

 Score =  242 bits (617), Expect = 6e-62
 Identities = 122/175 (69%), Positives = 139/175 (79%), Gaps = 6/175 (3%)
 Frame = +1

Query: 4   TSNGYSDRRFRIEHSQHLAPGAAARFGQQKIIASVQPEHLLDDAGSLAKKLGVARAEKES 183
           ++NG  DRRFRIEH+QHLA G AARFG+Q IIASVQP+HLLDDA S  KKLG+ RA+  S
Sbjct: 399 STNGKRDRRFRIEHAQHLASGTAARFGEQGIIASVQPDHLLDDADSAIKKLGMDRAQNGS 458

Query: 184 YLFQSLLASNALLAFGSDWPVAKMNPLGAIKTATKRIPPGWEKPWVPSECVSLSDALNAH 363
           Y F+SLL+SNA LA GSDWPVA +NPLG IKTA KRIPPGWE  W+PSEC+SL DA+ AH
Sbjct: 459 YQFRSLLSSNAQLALGSDWPVANINPLGGIKTAVKRIPPGWENAWIPSECLSLKDAIIAH 518

Query: 364 TISAAYASFLDQQLGSLSPGKLADFVVLSADTW------AKPEVEATYVSGKQAY 510
           TISAA A FLD  LGSLSPGKLADFV+LS ++W      A   VEATYV+G QAY
Sbjct: 519 TISAARACFLDCDLGSLSPGKLADFVILSTNSWDDFETEASAAVEATYVAGAQAY 573


>ref|XP_002304801.1| predicted protein [Populus trichocarpa] gi|222842233|gb|EEE79780.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  237 bits (604), Expect = 2e-60
 Identities = 120/173 (69%), Positives = 139/173 (80%), Gaps = 5/173 (2%)
 Frame = +1

Query: 7   SNGYSDRRFRIEHSQHLAPGAAARFGQQKIIASVQPEHLLDDAGSLAKKLGVARAEKESY 186
           +NG  DRRFRIEH+QHLAPG AARFG+Q ++ASVQP+HL DDA S AKKLGV RA++ SY
Sbjct: 344 TNGMRDRRFRIEHAQHLAPGMAARFGEQGVVASVQPDHLHDDADSAAKKLGVDRAQQGSY 403

Query: 187 LFQSLLASNALLAFGSDWPVAKMNPLGAIKTATKRIPPGWEKPWVPSECVSLSDALNAHT 366
           LF SLLASNA LA GSDWPVA +NP+G+IKTA +RIP GW+  W+ SEC+SL+DAL AHT
Sbjct: 404 LFHSLLASNARLALGSDWPVANINPVGSIKTAIQRIPHGWKNAWMSSECLSLNDALIAHT 463

Query: 367 ISAAYASFLDQQLGSLSPGKLADFVVLSADTW-----AKPEVEATYVSGKQAY 510
           ISAAYA FLD +LGSLSPGKLADFV+LS  T          VEATYV+G QAY
Sbjct: 464 ISAAYACFLDSELGSLSPGKLADFVILSTSTLDDLAEGSVTVEATYVAGVQAY 516


>ref|XP_002878048.1| LAF3/LAF3 ISF1/LAF3 ISF2 [Arabidopsis lyrata subsp. lyrata]
           gi|297323886|gb|EFH54307.1| LAF3/LAF3 ISF1/LAF3 ISF2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 576

 Score =  234 bits (596), Expect = 2e-59
 Identities = 117/174 (67%), Positives = 136/174 (78%), Gaps = 6/174 (3%)
 Frame = +1

Query: 7   SNGYSDRRFRIEHSQHLAPGAAARFGQQKIIASVQPEHLLDDAGSLAKKLGVARAEKESY 186
           +NGY DRRFRIEH+QHLAPG+A RFGQ  I+ASVQP+HLLDDA S+A+K+G  RAEKESY
Sbjct: 402 ANGYRDRRFRIEHAQHLAPGSANRFGQLHIVASVQPDHLLDDADSVARKIGSERAEKESY 461

Query: 187 LFQSLLASNALLAFGSDWPVAKMNPLGAIKTATKRIPPGWEKPWVPSECVSLSDALNAHT 366
           LFQSLL  NALLA GSDWPVA +NPL +I+TA KRIPP W+  W+PSE +S +DAL A T
Sbjct: 462 LFQSLLNGNALLALGSDWPVADINPLHSIRTAVKRIPPKWDHAWIPSERISFTDALIAQT 521

Query: 367 ISAAYASFLDQQLGSLSPGKLADFVVLSADTW------AKPEVEATYVSGKQAY 510
           ISAA  +FLD  LGSLSPGKLADFV+LS ++W          V ATYV GKQ Y
Sbjct: 522 ISAARGAFLDHHLGSLSPGKLADFVILSTNSWDEFSKDVSASVLATYVGGKQLY 575


>ref|XP_003541592.1| PREDICTED: putative amidohydrolase ytcJ-like [Glycine max]
          Length = 578

 Score =  233 bits (593), Expect = 4e-59
 Identities = 114/175 (65%), Positives = 137/175 (78%), Gaps = 6/175 (3%)
 Frame = +1

Query: 4   TSNGYSDRRFRIEHSQHLAPGAAARFGQQKIIASVQPEHLLDDAGSLAKKLGVARAEKES 183
           ++NG  DRRFRIEH+Q LA G   RFG+Q+++AS+QP+ LLDDA S +KKLG  RAEKES
Sbjct: 403 STNGMRDRRFRIEHAQQLAAGTPGRFGKQRVVASMQPDQLLDDADSTSKKLGKDRAEKES 462

Query: 184 YLFQSLLASNALLAFGSDWPVAKMNPLGAIKTATKRIPPGWEKPWVPSECVSLSDALNAH 363
           YLF+SLL +NAL+AFGSDWPV  +NPL  IKTA KR PP W+  W+PSEC+SL DA+ A+
Sbjct: 463 YLFRSLLNNNALVAFGSDWPVVDINPLSGIKTAMKRRPPNWQSAWIPSECISLDDAIKAY 522

Query: 364 TISAAYASFLDQQLGSLSPGKLADFVVLSADTW------AKPEVEATYVSGKQAY 510
           TISAA ASFLD+ LGSLSPGKLADFV+LS D+W      A   VE TYVSG +AY
Sbjct: 523 TISAARASFLDKDLGSLSPGKLADFVILSTDSWKDFAEDASANVEETYVSGVRAY 577


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