BLASTX nr result

ID: Coptis23_contig00003890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003890
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223...   104   3e-20
emb|CBI15772.3| unnamed protein product [Vitis vinifera]              103   4e-20
ref|XP_002284717.1| PREDICTED: uncharacterized protein LOC100254...   102   8e-20
ref|XP_002511069.1| conserved hypothetical protein [Ricinus comm...    97   5e-18
ref|XP_002318188.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17

>ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223310 [Cucumis sativus]
          Length = 168

 Score =  104 bits (259), Expect = 3e-20
 Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 17/147 (11%)
 Frame = -2

Query: 515 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVK-GDYVPVYITLGMIVLSVSLGINTA 339
           S RT+AT+T    K  A T D      ++KP+  + GD+VPVY+ +GMI LSV LG++ A
Sbjct: 21  STRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYVAIGMIALSVGLGLHMA 80

Query: 338 THHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINTSFFRKVSHTR----------- 192
              L +SP+V V KK+R         E+VA+E EKF   SFFRKV+H +           
Sbjct: 81  KQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRKVAHIQEVEKFGDYKVP 140

Query: 191 -----GDIQTRPLKMETLKSVGVDPAK 126
                GD    P + E+LKSVG+DPA+
Sbjct: 141 YDPLLGDAYAHPHRTESLKSVGIDPAR 167


>emb|CBI15772.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  103 bits (258), Expect = 4e-20
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
 Frame = -2

Query: 590 SLFVAYLDCSSIMASRKMDLMRTLLSRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVK 411
           SL+   +  S+   + +  + R   S  TFATST    +  A T D       ++ RGVK
Sbjct: 67  SLYCKTMGFSATRGNLRSMVNRLRGSHYTFATSTSPKMRAYAPTADFS-NVQHSELRGVK 125

Query: 410 GDYVPVYITLGMIVLSVSLGINTATHHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKF 231
           GD+VPVY+ +GMI +SV+LG+ TA H L YSPAV + K +R         + V DE +KF
Sbjct: 126 GDFVPVYVAMGMIAMSVTLGLCTAMHELMYSPAVHLRKSRRETLPEVEDPDTVVDEGDKF 185

Query: 230 INTSFFRKVSHTR---------GDIQTRPLKMETLKSVGVDP 132
           +  S  RKV+H +          D  TRP +  TLKSVG+DP
Sbjct: 186 VKKSLLRKVAHVQELELVPHPIEDPLTRPPRAVTLKSVGIDP 227


>ref|XP_002284717.1| PREDICTED: uncharacterized protein LOC100254405 [Vitis vinifera]
          Length = 158

 Score =  102 bits (255), Expect = 8e-20
 Identities = 60/137 (43%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
 Frame = -2

Query: 515 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVKGDYVPVYITLGMIVLSVSLGINTAT 336
           S  TFATST    +  A T D       ++ RGVKGD+VPVY+ +GMI +SV+LG+ TA 
Sbjct: 20  SHYTFATSTSPKMRAYAPTADFS-NVQHSELRGVKGDFVPVYVAMGMIAMSVTLGLCTAM 78

Query: 335 HHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINTSFFRKVSHTR---------GDI 183
           H L YSPAV + K +R         + V DE +KF+  S  RKV+H +          D 
Sbjct: 79  HELMYSPAVHLRKSRRETLPEVEDPDTVVDEGDKFVKKSLLRKVAHVQELELVPHPIEDP 138

Query: 182 QTRPLKMETLKSVGVDP 132
            TRP +  TLKSVG+DP
Sbjct: 139 LTRPPRAVTLKSVGIDP 155


>ref|XP_002511069.1| conserved hypothetical protein [Ricinus communis]
           gi|223550184|gb|EEF51671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 61/148 (41%), Positives = 78/148 (52%), Gaps = 14/148 (9%)
 Frame = -2

Query: 533 LMRTLLSRRTFATSTILNSKQVAATVD-----AQVEGPKAKPRGVKGDYVPVYITLGMIV 369
           ++  L    T+ TST    K  A   D      + E  K+K  G KGDYVPVY+ LG+I 
Sbjct: 12  MVNRLRGNATYGTSTSPKMKAYAPAADDFGNVLREERSKSK-MGQKGDYVPVYVALGLIA 70

Query: 368 LSVSLGINTATHHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINTSFFRKVSHTR- 192
           LS  LG++TA   L YSP+V+V KK R         E V DEA KF+  SF RK +H + 
Sbjct: 71  LSTMLGLHTAKQQLLYSPSVRVKKKLRETIPEVVCPEKVVDEAHKFVAKSFLRKAAHIQE 130

Query: 191 --------GDIQTRPLKMETLKSVGVDP 132
                    DI   P + ETLKS+G+DP
Sbjct: 131 FDSALQSLPDIYANPPRAETLKSIGIDP 158


>ref|XP_002318188.1| predicted protein [Populus trichocarpa] gi|222858861|gb|EEE96408.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 59/143 (41%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
 Frame = -2

Query: 506 TFATSTILNSKQVAATVDA---QVEGPKAKPRGVKGDYVPVYITLGMIVLSVSLGINTAT 336
           T+ATST    K  A T D             + V+GD+VPVY+ +GMI +S+SLG+ TA 
Sbjct: 34  TYATSTPPKLKSYAPTADQFGHHYHQESKHGKKVRGDFVPVYVAIGMIAVSISLGLYTAK 93

Query: 335 HHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINTSFFRKVSH-------------- 198
             + Y+P V+V KK R         + V DEA+KFI  SFFRKV+H              
Sbjct: 94  QQVLYAPNVRVRKKTRETIPEVVDPDKVVDEADKFIKKSFFRKVAHVQEFDHYGLEYLPD 153

Query: 197 -TRGDIQTRPLKMETLKSVGVDP 132
            TR D   R  + ETLK VGVDP
Sbjct: 154 PTRKDAFARKPRAETLKDVGVDP 176


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