BLASTX nr result

ID: Coptis23_contig00003883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003883
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520106.1| peptidyl-prolyl cis-trans isomerase, putativ...   361   2e-97
ref|XP_002276441.1| PREDICTED: probable peptidyl-prolyl cis-tran...   360   3e-97
ref|XP_004138913.1| PREDICTED: probable peptidyl-prolyl cis-tran...   350   3e-94
ref|NP_001242025.1| uncharacterized protein LOC100819238 precurs...   350   3e-94
ref|XP_003613660.1| Peptidyl-prolyl cis-trans isomerase-like pro...   350   3e-94

>ref|XP_002520106.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223540598|gb|EEF42161.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 222

 Score =  361 bits (926), Expect = 2e-97
 Identities = 170/221 (76%), Positives = 201/221 (90%), Gaps = 2/221 (0%)
 Frame = +1

Query: 34  WIS--ILLSFSLLATFVSSQEPQLGSARVLFQTNYGDIEFGFYPTVAPKTVDHIYKLVRM 207
           WI+  + L F+   +  SS++P+LGSARV+FQTNYGDIEFGFYP VAP+TV+HIYKLVR+
Sbjct: 2   WIAGWLCLVFAAAISAASSEDPELGSARVVFQTNYGDIEFGFYPNVAPQTVEHIYKLVRL 61

Query: 208 GCYNTNHFFRVDKGFVAQVADVIGGRQAPLNEEQREEAEKTVVGEFSNVKHKRGILSMGR 387
           GCYNTNHFFRVDKGFVAQVADV+GGR AP+NEEQR+EA+KTV+GEFS+VKH RGILSMGR
Sbjct: 62  GCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEEQRKEAQKTVIGEFSHVKHVRGILSMGR 121

Query: 388 FDDPDSAGSSFSILLGDAPHLDGQYAVFGKLTKGDETLRKLEQLPTRTEGIFIMPTERIT 567
           + DP+SA SSFSILLGDAPHLDGQYA+FGK+TKGD+TL KLEQ+PT  EGIF+MPTERIT
Sbjct: 122 YSDPNSASSSFSILLGDAPHLDGQYAIFGKVTKGDDTLSKLEQVPTHREGIFVMPTERIT 181

Query: 568 ILSTYFYDATLETCDRERTILKRRLAASAIEVERQRMKCLP 690
           ILS+Y+YDA +ETC+ ER+IL+RRLAASAIE+ERQRMKC P
Sbjct: 182 ILSSYYYDAVIETCEEERSILRRRLAASAIEIERQRMKCFP 222


>ref|XP_002276441.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase isoform 1
           [Vitis vinifera] gi|359473259|ref|XP_003631278.1|
           PREDICTED: probable peptidyl-prolyl cis-trans isomerase
           isoform 2 [Vitis vinifera] gi|296086396|emb|CBI31985.3|
           unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  360 bits (924), Expect = 3e-97
 Identities = 173/220 (78%), Positives = 198/220 (90%), Gaps = 1/220 (0%)
 Frame = +1

Query: 34  WISILLSFSL-LATFVSSQEPQLGSARVLFQTNYGDIEFGFYPTVAPKTVDHIYKLVRMG 210
           WI  LL  +L      SSQEPQLGSARV+FQTNYGDIEFGF+P VAPKTVDHI+KLVR+G
Sbjct: 7   WIVGLLCLALAFVVGASSQEPQLGSARVVFQTNYGDIEFGFFPGVAPKTVDHIFKLVRLG 66

Query: 211 CYNTNHFFRVDKGFVAQVADVIGGRQAPLNEEQREEAEKTVVGEFSNVKHKRGILSMGRF 390
           C+NTNHFFRVD+GFVAQVADV+GGR AP+NEEQREEA KTVVGEFS+VKH RGILSMGR+
Sbjct: 67  CFNTNHFFRVDRGFVAQVADVVGGRSAPMNEEQREEAVKTVVGEFSDVKHVRGILSMGRY 126

Query: 391 DDPDSAGSSFSILLGDAPHLDGQYAVFGKLTKGDETLRKLEQLPTRTEGIFIMPTERITI 570
            DPDSA SSFS+LLGDAPHLDGQYA+FG++TKGDETL+KLEQLPTR EGIF+MPTERITI
Sbjct: 127 ADPDSASSSFSMLLGDAPHLDGQYAIFGRVTKGDETLKKLEQLPTRREGIFVMPTERITI 186

Query: 571 LSTYFYDATLETCDRERTILKRRLAASAIEVERQRMKCLP 690
           LS+YFYD  +ETC++E++ LKRRLAAS +E+ERQRMKC P
Sbjct: 187 LSSYFYDTKMETCEQEKSTLKRRLAASVVEIERQRMKCFP 226


>ref|XP_004138913.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase-like
           [Cucumis sativus]
          Length = 226

 Score =  350 bits (899), Expect = 3e-94
 Identities = 166/218 (76%), Positives = 196/218 (89%)
 Frame = +1

Query: 37  ISILLSFSLLATFVSSQEPQLGSARVLFQTNYGDIEFGFYPTVAPKTVDHIYKLVRMGCY 216
           ++ LL F+   T  S+Q+  LGSARV+FQTNYGDIEFGF+P VAP+TVDHI+KLVR+GCY
Sbjct: 10  LAFLLFFAFF-TITSAQDSHLGSARVVFQTNYGDIEFGFFPKVAPRTVDHIFKLVRLGCY 68

Query: 217 NTNHFFRVDKGFVAQVADVIGGRQAPLNEEQREEAEKTVVGEFSNVKHKRGILSMGRFDD 396
           NTNHFFRVDKGFVAQVADV+GGR AP+NEEQR EAEKTVVGEFS+VKH RGILSMGR+DD
Sbjct: 69  NTNHFFRVDKGFVAQVADVVGGRLAPMNEEQRTEAEKTVVGEFSDVKHVRGILSMGRYDD 128

Query: 397 PDSAGSSFSILLGDAPHLDGQYAVFGKLTKGDETLRKLEQLPTRTEGIFIMPTERITILS 576
           PDSA SSFS+LLGDAPHLDG YA+FGK+TKGD+TL+KLE+LPTR EGIF+MPTERITILS
Sbjct: 129 PDSAQSSFSMLLGDAPHLDGTYAIFGKVTKGDDTLKKLEELPTRREGIFVMPTERITILS 188

Query: 577 TYFYDATLETCDRERTILKRRLAASAIEVERQRMKCLP 690
           +Y+YD  L++C+ +R+ LKRRLAAS +E+ERQRMKC P
Sbjct: 189 SYYYDTNLDSCEEDRSTLKRRLAASFVEIERQRMKCFP 226


>ref|NP_001242025.1| uncharacterized protein LOC100819238 precursor [Glycine max]
           gi|255640687|gb|ACU20628.1| unknown [Glycine max]
          Length = 230

 Score =  350 bits (899), Expect = 3e-94
 Identities = 174/221 (78%), Positives = 192/221 (86%), Gaps = 2/221 (0%)
 Frame = +1

Query: 34  WISILLSFSLLA--TFVSSQEPQLGSARVLFQTNYGDIEFGFYPTVAPKTVDHIYKLVRM 207
           WI     FSLLA  + +S+ EP+LGS RV+FQT YGDIEFGFYPTVAPKTVDHIYKLVR+
Sbjct: 9   WIK---GFSLLALISVISALEPELGSTRVVFQTKYGDIEFGFYPTVAPKTVDHIYKLVRL 65

Query: 208 GCYNTNHFFRVDKGFVAQVADVIGGRQAPLNEEQREEAEKTVVGEFSNVKHKRGILSMGR 387
           G YNTNHFFRVDKGFVAQVADV  GR AP+NEEQR EA KTVVGEF+ VKH RGILSMGR
Sbjct: 66  GGYNTNHFFRVDKGFVAQVADVTNGRSAPMNEEQRREAVKTVVGEFTEVKHVRGILSMGR 125

Query: 388 FDDPDSAGSSFSILLGDAPHLDGQYAVFGKLTKGDETLRKLEQLPTRTEGIFIMPTERIT 567
           +DDPDSA SSFSILLGDAPHLDG+YA+FGK+TKGDETL KLEQLPTR EGIF+MP ERIT
Sbjct: 126 YDDPDSASSSFSILLGDAPHLDGKYAIFGKVTKGDETLTKLEQLPTRKEGIFVMPMERIT 185

Query: 568 ILSTYFYDATLETCDRERTILKRRLAASAIEVERQRMKCLP 690
           ILS+Y+YD   E C+ +R+ILKRRLAASAIEVERQRMKC P
Sbjct: 186 ILSSYYYDTETENCEEDRSILKRRLAASAIEVERQRMKCFP 226


>ref|XP_003613660.1| Peptidyl-prolyl cis-trans isomerase-like protein [Medicago
           truncatula] gi|217075436|gb|ACJ86078.1| unknown
           [Medicago truncatula] gi|355514995|gb|AES96618.1|
           Peptidyl-prolyl cis-trans isomerase-like protein
           [Medicago truncatula] gi|388515327|gb|AFK45725.1|
           unknown [Medicago truncatula]
          Length = 220

 Score =  350 bits (899), Expect = 3e-94
 Identities = 171/217 (78%), Positives = 193/217 (88%), Gaps = 3/217 (1%)
 Frame = +1

Query: 49  LSFSLLATF---VSSQEPQLGSARVLFQTNYGDIEFGFYPTVAPKTVDHIYKLVRMGCYN 219
           L F LL  F   +SS EPQ+GS RV+FQTNYGDIEFGFYPTVAPKTVDHI+KLVR+G YN
Sbjct: 4   LRFILLLAFASSISSFEPQMGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYN 63

Query: 220 TNHFFRVDKGFVAQVADVIGGRQAPLNEEQREEAEKTVVGEFSNVKHKRGILSMGRFDDP 399
           TNHFFRVDKGFVAQVADV  GR AP+NEEQR  AEKTVVGEFS+VKH RGILSMGR DDP
Sbjct: 64  TNHFFRVDKGFVAQVADVANGRSAPMNEEQRRVAEKTVVGEFSDVKHVRGILSMGRHDDP 123

Query: 400 DSAGSSFSILLGDAPHLDGQYAVFGKLTKGDETLRKLEQLPTRTEGIFIMPTERITILST 579
           DS GSSFS+LLG++PHLDG+YA+FGK+TKGD+TL KLEQLPTR EGIF+MPTERITILS+
Sbjct: 124 DSGGSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLTKLEQLPTRREGIFVMPTERITILSS 183

Query: 580 YFYDATLETCDRERTILKRRLAASAIEVERQRMKCLP 690
           Y+YD   ETC+++R++LKRRLAASAIEVERQRMKC P
Sbjct: 184 YYYDTEAETCEQDRSVLKRRLAASAIEVERQRMKCFP 220


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