BLASTX nr result

ID: Coptis23_contig00003874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003874
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549058.1| PREDICTED: LRR receptor-like serine/threonin...    62   4e-08
gb|ACJ03072.1| HB06p [Malus floribunda]                                60   2e-07
ref|XP_003549065.1| PREDICTED: LRR receptor-like serine/threonin...    59   3e-07
ref|XP_003549055.1| PREDICTED: probable leucine-rich repeat rece...    59   3e-07
ref|XP_002274689.1| PREDICTED: receptor-like protein 12-like [Vi...    59   3e-07

>ref|XP_003549058.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Glycine max]
          Length = 1258

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
 Frame = +1

Query: 1    NNLSGTIPTCFRNLSGMLLLNGS--------ISFGQYEQVIKQVI------KGIYIEYHI 138
            NNLSG IP+CF NLS M L+N S        + +G+Y   ++ ++      KG   EY  
Sbjct: 858  NNLSGNIPSCFSNLSAMTLMNQSTDPRIYSQVQYGKYYSSMQSIVSVLLWLKGRGDEY-- 915

Query: 139  KFAVGLPFNLDLSSNNFVGQIPEELTLLTGL 231
            +  +GL  ++DLSSN  +G+IP E+T L GL
Sbjct: 916  RNILGLVTSIDLSSNKLLGEIPREITYLNGL 946


>gb|ACJ03072.1| HB06p [Malus floribunda]
          Length = 965

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
 Frame = +1

Query: 1   NNLSGTIPTCFRNLSGMLL---LNGSISFGQ-YEQVIKQVIKGIYIEYHIKFAVGLPFNL 168
           N+LSG IPTCF+N S M     +N  + F   + + +  V KG   EY+    +GL   +
Sbjct: 725 NSLSGAIPTCFQNFSAMATTPDVNKPLGFAPLFMESVIVVTKGRQDEYYGMSTLGLVIVM 784

Query: 169 DLSSNNFVGQIPEELTLLTGL 231
           DLS N   G+IPEELT LTGL
Sbjct: 785 DLSDNMLSGEIPEELTSLTGL 805


>ref|XP_003549065.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO2-like [Glycine max]
          Length = 1482

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 15/92 (16%)
 Frame = +1

Query: 1    NNLSGTIPTCFRNLSGMLLLNGSI---------SFGQYEQVIKQVI------KGIYIEYH 135
            NNLSG IP+CF NLS M L N S           +G+Y   ++ ++      KG   EY 
Sbjct: 1234 NNLSGNIPSCFSNLSAMTLKNQSTDPRIYSQAQQYGRYYSSMRSIVSVLLWLKGRGDEY- 1292

Query: 136  IKFAVGLPFNLDLSSNNFVGQIPEELTLLTGL 231
             +  +GL  ++DLSSN  +G+IP E+T L GL
Sbjct: 1293 -RNILGLVTSIDLSSNKLLGEIPREITYLNGL 1323


>ref|XP_003549055.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At1g35710-like [Glycine max]
          Length = 1176

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
 Frame = +1

Query: 1    NNLSGTIPTCFRNLSGMLLLNGS--------ISFGQYEQVIKQVI------KGIYIEYHI 138
            NNLSG IP+CF NLS M L N S        + +G+Y   ++ ++      KG   EY  
Sbjct: 884  NNLSGNIPSCFSNLSAMTLKNQSTDPRIYSQVQYGKYYSSMQSIVSVLLWLKGRGDEY-- 941

Query: 139  KFAVGLPFNLDLSSNNFVGQIPEELTLLTGL 231
               +GL  ++DLSSN  +G+IP E+T L GL
Sbjct: 942  GNILGLVTSIDLSSNKLLGEIPREITYLNGL 972


>ref|XP_002274689.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 985

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
 Frame = +1

Query: 1   NNLSGTIPTCFRNLSGMLL-LNGSISFGQYEQVIKQ--------VIKGIYIEYHIKFAVG 153
           NNLSGTIP CF N S M+  LN S  F  + +  +         V+KGI  EY     +G
Sbjct: 745 NNLSGTIPRCFGNFSSMIKELNSSSPFRFHNEHFESGSTDTATLVMKGI--EYEYDKTLG 802

Query: 154 LPFNLDLSSNNFVGQIPEELTLLTGL 231
           L   +DLSSN   G+IPEELT L GL
Sbjct: 803 LLAGMDLSSNKLSGEIPEELTDLHGL 828


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