BLASTX nr result

ID: Coptis23_contig00003872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003872
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23721.3| unnamed protein product [Vitis vinifera]              263   e-119
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261...   260   e-117
ref|XP_002314507.1| predicted protein [Populus trichocarpa] gi|2...   243   e-111
ref|XP_002528349.1| Ras-GTPase-activating protein-binding protei...   239   e-109
ref|NP_001242133.1| uncharacterized protein LOC100795457 [Glycin...   248   e-107

>emb|CBI23721.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  263 bits (671), Expect(2) = e-119
 Identities = 141/255 (55%), Positives = 177/255 (69%)
 Frame = -1

Query: 1652 VSALQVGSYFXXXXXXXXXXQPDFVHQFYTDSSTMLRIDGNSIESANAMLQIHSLIMSLN 1473
            V+A QVG+YF          QPDFVHQFY+D+ST+LR+DGN+ E+A+AMLQIH+LIMSLN
Sbjct: 9    VTAAQVGAYFVGQYYQVLQQQPDFVHQFYSDASTVLRVDGNTRETASAMLQIHTLIMSLN 68

Query: 1472 FSGIEITTAHSLDSWNGGVLVMVSGSLQTKDFNGRRKFAQTFFLAPQEKGYFVLNDIFNF 1293
            ++GIEI TAHSL+SWNGGVLV+VSGS+Q KDF+GRRKF QTFFLAPQEKG+FVLNDI +F
Sbjct: 69   YTGIEIKTAHSLESWNGGVLVVVSGSVQIKDFSGRRKFVQTFFLAPQEKGFFVLNDILHF 128

Query: 1292 LEEEPFNQHQAAILAHNHFDVNVNASNPLPELEKMTFTISDYVPHGDSQPRDFVTSAYGE 1113
            ++E+   QH AA+LA +  D  +NASN +PE       +S+Y+  G+ Q R+FV      
Sbjct: 129  IDEDLIQQHPAALLAQSSLDSRLNASNTIPE------PVSNYMLGGEIQAREFVAPVNAM 182

Query: 1112 ENNTVDDYSFPEQQQQHNVPETNCILGETPLEESTTSFSHGLNHLQDXXXXXXXXXXXXX 933
            EN  VD Y FPEQ+ Q  V ET+ I  +   E+S  S  + +N LQD             
Sbjct: 183  ENGPVDRYGFPEQRLQ-QVTETDNIPEDNSGEDSNGSLQNVMNTLQDLPPAPVDEPVGEP 241

Query: 932  PKHTYASILRVAKAQ 888
             KHTYASILRVAK Q
Sbjct: 242  QKHTYASILRVAKGQ 256



 Score =  194 bits (493), Expect(2) = e-119
 Identities = 104/207 (50%), Positives = 137/207 (66%), Gaps = 2/207 (0%)
 Frame = -2

Query: 829 SVAPQRSINKNAPPTSEWHYTSQPTEQFYPAPNLGSERSSXXXXXXXXXXXXXXEGTSVY 650
           SV+PQ   NK+ PP SEWH+  QP+ +   A ++  E+ +              E  SVY
Sbjct: 260 SVSPQSYNNKSMPPASEWHHMPQPSNEQSVASSVMFEKPASEVAEEVSGVEDEGEIKSVY 319

Query: 649 VRNLSSTISASDLEQELKTFGKIKPEGVVIRTRKD-VGVYYAFVDFEDILGAQNAVKGSP 473
           VRNL ST+SAS++ +E K FG++KP+GVVIR RKD +GV YAFV++EDI G QNA+K S 
Sbjct: 320 VRNLPSTVSASEIAKEFKNFGRLKPDGVVIRNRKDNIGVCYAFVEYEDISGVQNAIKAST 379

Query: 472 IQLGGRQIHIEERRPNSSALSXXXXXXXXXXXXGYPTEAPRGRFGSHNFVRGSG-DSSDR 296
           IQ+ GRQ+HIEERR N+++LS             Y +EAPRGR+G+  F RG+G D  DR
Sbjct: 380 IQIAGRQVHIEERRANNNSLS--RGGRRGRGRGSYQSEAPRGRYGARTFGRGNGQDGGDR 437

Query: 295 EYSRPRGNGYNRRGATQDRGNLGNQVT 215
           +Y+RPRGNG+ R  A QDRG  GNQV+
Sbjct: 438 DYNRPRGNGFYRPSARQDRGFSGNQVS 464


>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
          Length = 751

 Score =  260 bits (665), Expect(2) = e-117
 Identities = 139/253 (54%), Positives = 176/253 (69%)
 Frame = -1

Query: 1646 ALQVGSYFXXXXXXXXXXQPDFVHQFYTDSSTMLRIDGNSIESANAMLQIHSLIMSLNFS 1467
            A++VG+YF          QPDFVHQFY+D+ST+LR+DGN+ E+A+AMLQIH+LIMSLN++
Sbjct: 272  AIRVGAYFVGQYYQVLQQQPDFVHQFYSDASTVLRVDGNTRETASAMLQIHTLIMSLNYT 331

Query: 1466 GIEITTAHSLDSWNGGVLVMVSGSLQTKDFNGRRKFAQTFFLAPQEKGYFVLNDIFNFLE 1287
            GIEI TAHSL+SWNGGVLV+VSGS+Q KDF+GRRKF QTFFLAPQEKG+FVLNDI +F++
Sbjct: 332  GIEIKTAHSLESWNGGVLVVVSGSVQIKDFSGRRKFVQTFFLAPQEKGFFVLNDILHFID 391

Query: 1286 EEPFNQHQAAILAHNHFDVNVNASNPLPELEKMTFTISDYVPHGDSQPRDFVTSAYGEEN 1107
            E+   QH AA+LA +  D  +NASN +PE       +S+Y+  G+ Q R+FV      EN
Sbjct: 392  EDLIQQHPAALLAQSSLDSRLNASNTIPE------PVSNYMLGGEIQAREFVAPVNAMEN 445

Query: 1106 NTVDDYSFPEQQQQHNVPETNCILGETPLEESTTSFSHGLNHLQDXXXXXXXXXXXXXPK 927
              VD Y FPEQ+ Q  V ET+ I  +   E+S  S  + +N LQD              K
Sbjct: 446  GPVDRYGFPEQRLQ-QVTETDNIPEDNSGEDSNGSLQNVMNTLQDLPPAPVDEPVGEPQK 504

Query: 926  HTYASILRVAKAQ 888
            HTYASILRVAK Q
Sbjct: 505  HTYASILRVAKGQ 517



 Score =  188 bits (478), Expect(2) = e-117
 Identities = 104/222 (46%), Positives = 137/222 (61%), Gaps = 17/222 (7%)
 Frame = -2

Query: 829  SVAPQRSINKNAPPTSEWHYTSQPTEQFYPAPNLGSERSSXXXXXXXXXXXXXXEGTSVY 650
            SV+PQ   NK+ PP SEWH+  QP+ +   A ++  E+ +              E  SVY
Sbjct: 521  SVSPQSYNNKSMPPASEWHHMPQPSNEQSVASSVMFEKPASEVAEEVSGVEDEGEIKSVY 580

Query: 649  VRNLSSTISASDLEQELKTFGKIKPEGVVIRTRKD-VGVYYAFVDFEDILGAQNAVKGSP 473
            VRNL ST+SAS++ +E K FG++KP+GVVIR RKD +GV YAFV++EDI G QNA+K S 
Sbjct: 581  VRNLPSTVSASEIAKEFKNFGRLKPDGVVIRNRKDNIGVCYAFVEYEDISGVQNAIKAST 640

Query: 472  IQLGGRQIHIEERRPNSSALSXXXXXXXXXXXXGYPTEAPRGRFGSHNFVRGSG------ 311
            IQ+ GRQ+HIEERR N+++LS             Y +EAPRGR+G+  F RG+G      
Sbjct: 641  IQIAGRQVHIEERRANNNSLS--RGGRRGRGRGSYQSEAPRGRYGARTFGRGNGQDGGDR 698

Query: 310  ----------DSSDREYSRPRGNGYNRRGATQDRGNLGNQVT 215
                      D  DR+Y+RPRGNG+ R  A QDRG  GNQV+
Sbjct: 699  DYNRPRGNGQDGGDRDYNRPRGNGFYRPSARQDRGFSGNQVS 740


>ref|XP_002314507.1| predicted protein [Populus trichocarpa] gi|222863547|gb|EEF00678.1|
            predicted protein [Populus trichocarpa]
          Length = 455

 Score =  243 bits (619), Expect(2) = e-111
 Identities = 128/250 (51%), Positives = 165/250 (66%)
 Frame = -1

Query: 1637 VGSYFXXXXXXXXXXQPDFVHQFYTDSSTMLRIDGNSIESANAMLQIHSLIMSLNFSGIE 1458
            VG+YF          QP+FVHQFY+D+STMLRIDG+  ESA  MLQIH+LIMSL ++GIE
Sbjct: 1    VGTYFVAQYYQVLQQQPEFVHQFYSDASTMLRIDGSIRESAATMLQIHALIMSLKYTGIE 60

Query: 1457 ITTAHSLDSWNGGVLVMVSGSLQTKDFNGRRKFAQTFFLAPQEKGYFVLNDIFNFLEEEP 1278
            I TAH+LDSWNGGVLVMVSG +Q K F+ +RKF +TFFLAPQEKGYFVLND+F+F++E+P
Sbjct: 61   IRTAHALDSWNGGVLVMVSGYVQVKGFDNKRKFVETFFLAPQEKGYFVLNDVFHFIDEQP 120

Query: 1277 FNQHQAAILAHNHFDVNVNASNPLPELEKMTFTISDYVPHGDSQPRDFVTSAYGEENNTV 1098
             + H A  LA  H D  +N+ N +PE       +  Y+  G++Q R+FV  A  +EN  V
Sbjct: 121  THHHPAVFLAQIHLDSKLNSPNAIPE------PVPTYLMGGETQAREFVAPADAKENGPV 174

Query: 1097 DDYSFPEQQQQHNVPETNCILGETPLEESTTSFSHGLNHLQDXXXXXXXXXXXXXPKHTY 918
            D Y+FPE++ Q    E+  IL E  +E+   S  +  ++ QD              KHTY
Sbjct: 175  DSYTFPEKRLQ-QASESENILEENSVEKPNGSLKNTASNAQDRQPASVEEPAREPQKHTY 233

Query: 917  ASILRVAKAQ 888
            ASILRVAK Q
Sbjct: 234  ASILRVAKGQ 243



 Score =  187 bits (474), Expect(2) = e-111
 Identities = 106/216 (49%), Positives = 133/216 (61%), Gaps = 1/216 (0%)
 Frame = -2

Query: 835 ASSVAPQRSINKNAPPTSEWHYTSQPTEQFYPAPNLGSERSSXXXXXXXXXXXXXXEGTS 656
           A+SV PQ S+NKN  P SEW++TSQ   Q     +   ER                   S
Sbjct: 245 ATSVTPQPSVNKNVTPASEWNHTSQAPVQQSTVMSDSFERPEAETAEEIHEDEIR----S 300

Query: 655 VYVRNLSSTISASDLEQELKTFGKIKPEGVVIRTRKDVGVYYAFVDFEDILGAQNAVKGS 476
           VYVRNL  T+S +++E+E K FG+I P+GVVIR+RKDVGV YAFV+FED+ G  NAVK  
Sbjct: 301 VYVRNLLPTLSEAEIEEEFKNFGEIVPDGVVIRSRKDVGVCYAFVEFEDMAGVHNAVKAG 360

Query: 475 PIQLGGRQIHIEERRPNSSALSXXXXXXXXXXXXGYPTEAPRGRFGSHNFVR-GSGDSSD 299
              +GGRQ++IEERRPNS+ +             GYPT+APRG F S +  R GS D  D
Sbjct: 361 SAIVGGRQVYIEERRPNSN-IPFRAGRGRGRGRGGYPTDAPRGGFSSRSSGRGGSYDGGD 419

Query: 298 REYSRPRGNGYNRRGATQDRGNLGNQVTGNGQGSWD 191
           R+Y+RP+GNGY R G  QDRG  G+QV+ NGQ   D
Sbjct: 420 RDYNRPKGNGYYRPGPRQDRGFSGHQVSRNGQDQTD 455


>ref|XP_002528349.1| Ras-GTPase-activating protein-binding protein, putative [Ricinus
            communis] gi|223532217|gb|EEF34021.1|
            Ras-GTPase-activating protein-binding protein, putative
            [Ricinus communis]
          Length = 472

 Score =  239 bits (609), Expect(2) = e-109
 Identities = 132/261 (50%), Positives = 168/261 (64%), Gaps = 6/261 (2%)
 Frame = -1

Query: 1652 VSALQVGSYFXXXXXXXXXXQPDFVHQFYTDSSTMLRIDGNSIESANAMLQIHSLIMSLN 1473
            V+A QVG+YF          QP+FV+QFY+D+STMLRIDG + ++A  MLQIH+LIMSLN
Sbjct: 9    VTAAQVGTYFVGQYYQLVQQQPEFVYQFYSDASTMLRIDGTNRDNATTMLQIHALIMSLN 68

Query: 1472 FSGIEITTAHSLDSWNGGVLVMVSGSLQTKDFNGRRKFAQTFFLAPQEKGYFVLNDIFNF 1293
            ++ IEI TAHS++SWNGGVLVMVSGS+Q KD   RRKF +TFFLAPQEKGYFVLND+F+F
Sbjct: 69   YTAIEIRTAHSVESWNGGVLVMVSGSVQVKDSTERRKFVETFFLAPQEKGYFVLNDVFHF 128

Query: 1292 LEEEPFNQHQAAILAHNHFDVNVNASNPLPELEKMTFTISDYVPHGDSQPRDFVTSAYGE 1113
            ++E P + H A IL  NH D  VN    +PE       +++Y+  G+ Q R+FV  A  +
Sbjct: 129  IDEAPIHHHPAVILTQNHLDSKVNVPTAIPE------PVANYLLGGEFQAREFVAPADAK 182

Query: 1112 ENN-TVDDYSFPEQQ-----QQHNVPETNCILGETPLEESTTSFSHGLNHLQDXXXXXXX 951
            EN   VD+Y+F EQQ     +  NV E N I    PL+++ +S        QD       
Sbjct: 183  ENGLPVDNYTFQEQQLHQAPESENVREENSIEANGPLQKTGSS-------AQDQLLASVD 235

Query: 950  XXXXXXPKHTYASILRVAKAQ 888
                   KHTYASILRVAK Q
Sbjct: 236  EPIGEPQKHTYASILRVAKGQ 256



 Score =  184 bits (468), Expect(2) = e-109
 Identities = 102/216 (47%), Positives = 126/216 (58%), Gaps = 1/216 (0%)
 Frame = -2

Query: 835 ASSVAPQRSINKNAPPTSEWHYTSQPTEQFYPAPNLGSERSSXXXXXXXXXXXXXXEGTS 656
           A SVA Q S+NKN+PPTS+W++ SQP  Q         ER                E  S
Sbjct: 258 APSVASQPSLNKNSPPTSDWNHASQPISQTETVTANSFERFGADTVEENSTAEDEDEVKS 317

Query: 655 VYVRNLSSTISASDLEQELKTFGKIKPEGVVIRTRKDVGVYYAFVDFEDILGAQNAVKGS 476
           VYVRNL +TIS +++ +E K FG I P+GVVIR+RKDVGV YAFV+FED+    NAVK  
Sbjct: 318 VYVRNLPTTISEAEIAEEFKNFGSIVPDGVVIRSRKDVGVCYAFVEFEDMTAVHNAVKAG 377

Query: 475 PIQLGGRQIHIEERRPNSSALSXXXXXXXXXXXXGYPTEAPRGRFGSHNFVR-GSGDSSD 299
              + GRQ++IEERRPNS+ +              YP +A RGRFG   F R G  D  D
Sbjct: 378 TAHVAGRQVYIEERRPNSN-IPSRAGRGRGRGRGSYPMDALRGRFGGRGFARVGVYDGGD 436

Query: 298 REYSRPRGNGYNRRGATQDRGNLGNQVTGNGQGSWD 191
           R+Y+R RGNGY R    QDRG  G QV+  GQ  W+
Sbjct: 437 RDYNRSRGNGYYRPSPRQDRGFTGYQVSRTGQNQWE 472


>ref|NP_001242133.1| uncharacterized protein LOC100795457 [Glycine max]
            gi|255640125|gb|ACU20353.1| unknown [Glycine max]
          Length = 471

 Score =  248 bits (632), Expect(2) = e-107
 Identities = 133/255 (52%), Positives = 175/255 (68%)
 Frame = -1

Query: 1652 VSALQVGSYFXXXXXXXXXXQPDFVHQFYTDSSTMLRIDGNSIESANAMLQIHSLIMSLN 1473
            V+A QVG+YF          QP+FVHQFY+D+STMLRIDGN+ E+A AMLQIH+LIMSL+
Sbjct: 9    VTAAQVGTYFVGQYYQVLQSQPEFVHQFYSDASTMLRIDGNARETAAAMLQIHALIMSLS 68

Query: 1472 FSGIEITTAHSLDSWNGGVLVMVSGSLQTKDFNGRRKFAQTFFLAPQEKGYFVLNDIFNF 1293
            ++GIEI TA SL+SW+GGVLVMVSGS+Q KD++ RRKF QTFFLAPQEKG+FVLNDIF+F
Sbjct: 69   YTGIEIKTAQSLESWSGGVLVMVSGSVQVKDYSRRRKFMQTFFLAPQEKGFFVLNDIFHF 128

Query: 1292 LEEEPFNQHQAAILAHNHFDVNVNASNPLPELEKMTFTISDYVPHGDSQPRDFVTSAYGE 1113
            +EE+P +Q QA +L  ++ D  +NAS+ + +       +S+Y+   D Q RD+V +   +
Sbjct: 129  VEEDPVHQQQAVLLPQSNLDPKLNASSAINK------PVSNYLLGRDIQARDYVATNEVK 182

Query: 1112 ENNTVDDYSFPEQQQQHNVPETNCILGETPLEESTTSFSHGLNHLQDXXXXXXXXXXXXX 933
            EN  VD+Y F EQ+ Q   P++  I  +  +EES  S    +N +QD             
Sbjct: 183  ENGVVDNYGFSEQRMQ-RAPDSEHIREDNAVEESNGSLQSSVNAVQDHAPASPDEPAGEP 241

Query: 932  PKHTYASILRVAKAQ 888
             KHTYASILRVAK Q
Sbjct: 242  QKHTYASILRVAKGQ 256



 Score =  167 bits (424), Expect(2) = e-107
 Identities = 103/213 (48%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
 Frame = -2

Query: 829 SVAPQRSINKNAPPTSEWHYTSQPT--EQFYPAPNLGSERSSXXXXXXXXXXXXXXEGTS 656
           SVA Q   +KN  P SEW +  Q +  +Q   A     ERS               E  S
Sbjct: 260 SVASQ---HKNVSP-SEWDHAPQSSSQQQQMTASANAFERSETDAAEEFPATEDEDEIKS 315

Query: 655 VYVRNLSSTISASDLEQELKTFGKIKPEGVVIRTRKDVGVYYAFVDFEDILGAQNAVKGS 476
           VYVRNLS T+S S++E E K FG+I+P+GVVIR+RKDVGV YAFV+FED+ G  NAVK  
Sbjct: 316 VYVRNLSPTVSPSEIEDEFKNFGRIRPDGVVIRSRKDVGVCYAFVEFEDMTGVYNAVKAG 375

Query: 475 PIQLGGRQIHIEERRPNSSALSXXXXXXXXXXXXGYPTEAPRGRFGSHNFVRGSG-DSSD 299
            +Q+ GRQ++IEERRPNS+  S             Y ++APRGRF   NF RG G D SD
Sbjct: 376 SVQIAGRQVYIEERRPNSNIPS--RGGRRGRGRGSYQSDAPRGRFNPRNFGRGHGQDGSD 433

Query: 298 REYSRPRGNGYNRRGATQDRGNLG-NQVTGNGQ 203
           REY + +GNG+ R    Q+RGN G +QV  NGQ
Sbjct: 434 REYDKLKGNGFYRPSPRQERGNSGHHQVPRNGQ 466


Top