BLASTX nr result
ID: Coptis23_contig00003864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003864
(2295 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15135.3| unnamed protein product [Vitis vinifera] 660 0.0
ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248... 657 0.0
ref|XP_002318586.1| PAF1 complex component [Populus trichocarpa]... 618 e-174
ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221... 615 e-173
ref|XP_002514667.1| RNA polymerase-associated protein LEO1, puta... 603 e-170
>emb|CBI15135.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 660 bits (1703), Expect = 0.0
Identities = 376/635 (59%), Positives = 420/635 (66%), Gaps = 7/635 (1%)
Frame = -1
Query: 2166 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXXXXSNRQPDYASXXXXXXXXXXXXXXXXX 1987
MGE KRHQMMQNLFGDQ N QP Y S
Sbjct: 1 MGEHKRHQMMQNLFGDQSEEEEEEIDSEHES----NPQPGYISDEGEGGPEPEGEGEIEG 56
Query: 1986 EKQGDAEVESEAELHNLDPDPGESEGERPQSSPEREVNDQHAXXXXXXXXXXXXXXXXXX 1807
QG+AEVESE EL ++DPDPGESE ER QSS + EV DQ
Sbjct: 57 --QGEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGDQREESEGRETGSDEKEGYGQR 114
Query: 1806 XXXXXRWNVADSGSERSEENHSVDNEDEEVDQARKSRSPSEEKDQAHISHSAAEIRDVFG 1627
R +V +SGSERSEENH D+EDEEVDQAR RSP EEKDQ H SHS AEIRDVFG
Sbjct: 115 VVTSRRRDVIESGSERSEENHYADHEDEEVDQARSPRSPGEEKDQTHNSHSVAEIRDVFG 174
Query: 1626 DSDEEEQEEYATRNDLEQDSHRSPMEEEEGYEKNSRPEDMVPDDDVQYESED-NIEHKPK 1450
+SD+EE EYA ND+EQ+S RSPMEEE YEKN RPED++PD+D QY SE+ N+E K K
Sbjct: 175 ESDDEEAAEYAVDNDIEQNSIRSPMEEEGSYEKNLRPEDILPDEDAQYGSEEENVEIKSK 234
Query: 1449 EKPVGPPLELEIPLRTPPGRPEKMNMIKVSNIMGIDPKPFDPKTYVEEDMFVTDESGSRK 1270
EKPVGPPL LE+PLR PP P+KMNMIKVSNIMGI+PKPFDPKTYVEED FVTDESGS+K
Sbjct: 235 EKPVGPPLVLEVPLRRPPAHPDKMNMIKVSNIMGIEPKPFDPKTYVEEDTFVTDESGSKK 294
Query: 1269 RIRLENNIVRWRSTRKPDGTKSYESNARFVRWSDGSLQLLIGNEVLDISVQQAQHDQAHL 1090
RIRLENNIVRWR+ + PDGT SYESNARFVRWSDGSLQLLIGNEVLDISVQ AQHDQ+HL
Sbjct: 295 RIRLENNIVRWRNVKNPDGTTSYESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQSHL 354
Query: 1089 FLRHGKGILQSQGRLQRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNHVTDNDPERE 910
FLRHGKGILQSQGR+ RKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKN +TD DPERE
Sbjct: 355 FLRHGKGILQSQGRILRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPERE 414
Query: 909 KEEKERALGQTIKANEILNRKRERVSRKYSHNVDRGRQLSPGFXXXXXXXXXXXDYHEPR 730
KEEKE+A+ QTI+AN++LNRKRE+V+RKY+ VDRGRQLSPGF DYH+ R
Sbjct: 415 KEEKEKAVSQTIRANQLLNRKREKVNRKYTQTVDRGRQLSPGFLEEALDEDDEPDYHDSR 474
Query: 729 RSVARRRFEEDLEVEAHAEKRIINAKRSQVHKDIXXXXXXXXXXXXXXXXXXXXXXXXXX 550
R RRRFE+DLE++ AEKRI N K+ HKDI
Sbjct: 475 RH--RRRFEDDLEMDTRAEKRIFNVKKG--HKDIPRKSSLSAIKSSRRPVDFSDSEREES 530
Query: 549 XXXXXXEV-ERTPPRKRV----XXXXXXXXXXXXXXXEQAGRXXXXXXXXXEPGQRSKDI 385
E ER+ RKR E+A EP Q+ K+
Sbjct: 531 EYESDGEEDERSFSRKRAEEPEEEYAEEDEEEDERDEEEAEANEESEEEVEEPKQKGKEY 590
Query: 384 GSRNKRKEIESDGDSPRRKPIPHRRMV-VYDSDED 283
KRK IESD DSP RK HRRM VY+SDE+
Sbjct: 591 A---KRKGIESDEDSPPRKTASHRRMAFVYESDEE 622
>ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248444 [Vitis vinifera]
Length = 623
Score = 657 bits (1696), Expect = 0.0
Identities = 377/636 (59%), Positives = 421/636 (66%), Gaps = 8/636 (1%)
Frame = -1
Query: 2166 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXXXXSNRQPDYASXXXXXXXXXXXXXXXXX 1987
MGE KRHQMMQNLFGDQ N QP Y S
Sbjct: 1 MGEHKRHQMMQNLFGDQSEEEEEEIDSEHES----NPQPGYISDEGEGGPEPEGEGEIEG 56
Query: 1986 EKQGDAEVESEAELHNLDPDPGESEGERPQSSPEREVNDQHAXXXXXXXXXXXXXXXXXX 1807
QG+AEVESE EL ++DPDPGESE ER QSS + EV DQ
Sbjct: 57 --QGEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGDQREESEGRETGSDEKEGYGQR 114
Query: 1806 XXXXXRWNVADSGSERSEENHSVDNEDEEVDQARK-SRSPSEEKDQAHISHSAAEIRDVF 1630
R +V +SGSERSEENH D+EDEEVDQAR SRSP EEKDQ H SHS AEIRDVF
Sbjct: 115 VVTSRRRDVIESGSERSEENHYADHEDEEVDQARSPSRSPGEEKDQTHNSHSVAEIRDVF 174
Query: 1629 GDSDEEEQEEYATRNDLEQDSHRSPMEEEEGYEKNSRPEDMVPDDDVQYESED-NIEHKP 1453
G+SD+EE EYA ND+EQ+S RSPMEEE YEKN RPED++PD+D QY SE+ N+E K
Sbjct: 175 GESDDEEAAEYAVDNDIEQNSIRSPMEEEGSYEKNLRPEDILPDEDAQYGSEEENVEIKS 234
Query: 1452 KEKPVGPPLELEIPLRTPPGRPEKMNMIKVSNIMGIDPKPFDPKTYVEEDMFVTDESGSR 1273
KEKPVGPPL LE+PLR PP P+KMNMIKVSNIMGI+PKPFDPKTYVEED FVTDESGS+
Sbjct: 235 KEKPVGPPLVLEVPLRRPPAHPDKMNMIKVSNIMGIEPKPFDPKTYVEEDTFVTDESGSK 294
Query: 1272 KRIRLENNIVRWRSTRKPDGTKSYESNARFVRWSDGSLQLLIGNEVLDISVQQAQHDQAH 1093
KRIRLENNIVRWR+ + PDGT SYESNARFVRWSDGSLQLLIGNEVLDISVQ AQHDQ+H
Sbjct: 295 KRIRLENNIVRWRNVKNPDGTTSYESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQSH 354
Query: 1092 LFLRHGKGILQSQGRLQRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNHVTDNDPER 913
LFLRHGKGILQSQGR+ RKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKN +TD DPER
Sbjct: 355 LFLRHGKGILQSQGRILRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPER 414
Query: 912 EKEEKERALGQTIKANEILNRKRERVSRKYSHNVDRGRQLSPGFXXXXXXXXXXXDYHEP 733
EKEEKE+A+ QTI+AN++LNRKRE+V+RKY+ VDRGRQLSPGF DYH+
Sbjct: 415 EKEEKEKAVSQTIRANQLLNRKREKVNRKYTQTVDRGRQLSPGFLEEALDEDDEPDYHDS 474
Query: 732 RRSVARRRFEEDLEVEAHAEKRIINAKRSQVHKDIXXXXXXXXXXXXXXXXXXXXXXXXX 553
RR RRRFE+DLE++ AEKRI N K+ HKDI
Sbjct: 475 RRH--RRRFEDDLEMDTRAEKRIFNVKKG--HKDIPRKSSLSAIKSSRRPVDFSDSEREE 530
Query: 552 XXXXXXXEV-ERTPPRKRV----XXXXXXXXXXXXXXXEQAGRXXXXXXXXXEPGQRSKD 388
E ER+ RKR E+A EP Q+ K+
Sbjct: 531 SEYESDGEEDERSFSRKRAEEPEEEYAEEDEEEDERDEEEAEANEESEEEVEEPKQKGKE 590
Query: 387 IGSRNKRKEIESDGDSPRRKPIPHRRMV-VYDSDED 283
KRK IESD DSP RK HRRM VY+SDE+
Sbjct: 591 YA---KRKGIESDEDSPPRKTASHRRMAFVYESDEE 623
>ref|XP_002318586.1| PAF1 complex component [Populus trichocarpa]
gi|222859259|gb|EEE96806.1| PAF1 complex component
[Populus trichocarpa]
Length = 620
Score = 618 bits (1593), Expect = e-174
Identities = 362/634 (57%), Positives = 411/634 (64%), Gaps = 6/634 (0%)
Frame = -1
Query: 2166 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXXXXSNRQPDYASXXXXXXXXXXXXXXXXX 1987
MGEEKRHQMMQNLFGDQ N QP+YAS
Sbjct: 1 MGEEKRHQMMQNLFGDQSEEEEEIDSEHES-----NPQPNYASDEAEGELRNDGEGEGEG 55
Query: 1986 EKQG--DAEVESEAELHNLDPDPGESEGERPQSSPEREVNDQHAXXXXXXXXXXXXXXXX 1813
E G D VESE E+ ++PDPGESEGER QSS E ++ DQ
Sbjct: 56 EVDGQEDVHVESEGEMREVEPDPGESEGEREQSSQEVDIGDQRDESDAKDSDSDAKEEYG 115
Query: 1812 XXXXXXXRWNVADSGSERSEENHSVDNEDEEVDQARK-SRSPSEEKDQAHISHSAAEIRD 1636
R +V +SGSE E+H VD+EDEEVDQAR S+SP EEKDQA + SA IRD
Sbjct: 116 HRVATSRRRDVIESGSE---EHHYVDHEDEEVDQARSPSKSPEEEKDQAQNAQSAPAIRD 172
Query: 1635 VFGDSDEEEQEEYATRNDLEQDSHRSPMEEEEGYEKNSRPEDMVPDDDVQYESED-NIEH 1459
VFGDS++EE++ YA RND+EQDS+RSPMEEEE YEKN RPEDM+ D+D QYESE+ N E
Sbjct: 173 VFGDSEDEEEDAYAVRNDIEQDSNRSPMEEEESYEKNLRPEDMLADEDAQYESEEENREA 232
Query: 1458 KPKEKPVGPPLELEIPLRTPPGRPEKMNMIKVSNIMGIDPKPFDPKTYVEEDMFVTDESG 1279
KPKEKP+GPPLE+E+P PP P+KMNMIKVSNIMGIDP FDPKTYVEE FVTDESG
Sbjct: 233 KPKEKPLGPPLEIEMPFCPPPADPKKMNMIKVSNIMGIDPNQFDPKTYVEEKTFVTDESG 292
Query: 1278 SRKRIRLENNIVRWRSTRKPDGTKSYESNARFVRWSDGSLQLLIGNEVLDISVQQAQHDQ 1099
++KRIRLENNIVRWR+ + PDG+ S ESNARFVRWSDGSLQLLIGNEVLDISVQ AQ DQ
Sbjct: 293 AQKRIRLENNIVRWRTVKNPDGSNSVESNARFVRWSDGSLQLLIGNEVLDISVQDAQQDQ 352
Query: 1098 AHLFLRHGKGILQSQGRLQRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNHVTDNDP 919
HLFLRH K +LQSQGR+ RKMRFMPSSLSSNSHRLLTALVDSRH+K YKVKN +TD DP
Sbjct: 353 THLFLRHNKSLLQSQGRILRKMRFMPSSLSSNSHRLLTALVDSRHRKAYKVKNCITDIDP 412
Query: 918 EREKEEKERALGQTIKANEILNRKRERVSRKYSHNVDRGRQLSPGFXXXXXXXXXXXDYH 739
EREKEEKE+A QTI+AN +LNRKRE+VSRKY+ NV+R RQLSPGF DY+
Sbjct: 413 EREKEEKEKAESQTIRANVLLNRKREKVSRKYTPNVERRRQLSPGFLEGALDEDDEPDYY 472
Query: 738 EPRRSVARRRFEEDLEVEAHAEKRIINAKRSQVHKDI-XXXXXXXXXXXXXXXXXXXXXX 562
RRS RRFEEDLEVEA AEKRI+NAK+ Q +DI
Sbjct: 473 NSRRS---RRFEEDLEVEARAEKRIMNAKKGQ--RDIPRKSDMSAVKSSKRPVDFSDSER 527
Query: 561 XXXXXXXXXXEVERTPPRKRVXXXXXXXXXXXXXXXEQAGRXXXXXXXXXEPGQRSKDIG 382
E ER+P KRV E EP Q+ K+ G
Sbjct: 528 EESEYETDGDEYERSPVHKRVDEPEHEYEEEEEHYEEDT-EVNGASEEEEEPKQKGKEFG 586
Query: 381 SRNKRKEIESDGDSPRRKPIPHRRM-VVYDSDED 283
S KR ES+ DSP RK RRM VVYDSDE+
Sbjct: 587 SSRKRIGFESEEDSPPRKIQSGRRMTVVYDSDEE 620
>ref|XP_004137426.1| PREDICTED: uncharacterized protein LOC101221752 [Cucumis sativus]
gi|449486962|ref|XP_004157455.1| PREDICTED:
uncharacterized protein LOC101229895 [Cucumis sativus]
Length = 623
Score = 615 bits (1585), Expect = e-173
Identities = 334/514 (64%), Positives = 377/514 (73%), Gaps = 8/514 (1%)
Frame = -1
Query: 2166 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXXXXSNRQPDYASXXXXXXXXXXXXXXXXX 1987
MGEEKRHQMMQNLFGDQ N QP+YAS
Sbjct: 1 MGEEKRHQMMQNLFGDQSEEEEEIDSEHES-----NPQPNYASDEGEGGAEPEGEGEVEG 55
Query: 1986 EKQGDAEVESEAELHNLDPDPGESEGERPQSSPEREV-NDQHAXXXXXXXXXXXXXXXXX 1810
G+ E+ESE EL + DPDPGESEGER QSS E +V + +
Sbjct: 56 --HGEVEIESEGELQDADPDPGESEGERDQSSQEVDVGHHREEESEGKEVDSDDREEYDQ 113
Query: 1809 XXXXXXRWNVADSGSERSEENHSVDNEDEEVDQARKSRSPSEEKDQAHISHSAAEIRDVF 1630
R ++ +S SERSEENH +DNEDEEVDQ +RSP EE+D H SH AEIRDVF
Sbjct: 114 RVVTSRRHDLVESESERSEENHYIDNEDEEVDQ---TRSPREEED--HNSHPVAEIRDVF 168
Query: 1629 GDSDEEEQEEYATRNDLEQDSHRSPMEEEEGYEKNSRPEDMVPDDDVQYES-------ED 1471
GDSDEEE+ EYA N+++QDS RSPMEEE +EK+ RP+D++PD+D +YES E+
Sbjct: 169 GDSDEEEEAEYAVGNEIKQDSARSPMEEEGSFEKSPRPDDIIPDEDARYESDARYESEEE 228
Query: 1470 NIEHKPKEKPVGPPLELEIPLRTPPGRPEKMNMIKVSNIMGIDPKPFDPKTYVEEDMFVT 1291
N E K KEKPVGPPLELEIPLR PP RPEKMNMIKVSNIMGIDPKPFDPKTYVEED+FVT
Sbjct: 229 NFEVKHKEKPVGPPLELEIPLRHPPARPEKMNMIKVSNIMGIDPKPFDPKTYVEEDIFVT 288
Query: 1290 DESGSRKRIRLENNIVRWRSTRKPDGTKSYESNARFVRWSDGSLQLLIGNEVLDISVQQA 1111
DESG+ KRIRLENNIVRWR+ RKPDGT YESNARFVRWSDGSLQLLIGNEVLDI+VQ A
Sbjct: 289 DESGANKRIRLENNIVRWRTVRKPDGTTKYESNARFVRWSDGSLQLLIGNEVLDINVQDA 348
Query: 1110 QHDQAHLFLRHGKGILQSQGRLQRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNHVT 931
+HDQAHLFLRHGKGILQSQGRL RKMRF+PSSL+SNSHRLLTALVDSRHKKVYKVKN +T
Sbjct: 349 KHDQAHLFLRHGKGILQSQGRLMRKMRFIPSSLTSNSHRLLTALVDSRHKKVYKVKNCIT 408
Query: 930 DNDPEREKEEKERALGQTIKANEILNRKRERVSRKYSHNVDRGRQLSPGFXXXXXXXXXX 751
D DPEREKEEKERA QTI+AN +LNRK+E+VS+KY+ +DR RQLSPGF
Sbjct: 409 DIDPEREKEEKERAESQTIRANVLLNRKKEKVSKKYAPVIDRRRQLSPGFLEDALEEEDE 468
Query: 750 XDYHEPRRSVARRRFEEDLEVEAHAEKRIINAKR 649
DY + RRS RRRFEEDLE EA AEKRI+NAK+
Sbjct: 469 TDYIDSRRS--RRRFEEDLEAEARAEKRIMNAKK 500
>ref|XP_002514667.1| RNA polymerase-associated protein LEO1, putative [Ricinus communis]
gi|223546271|gb|EEF47773.1| RNA polymerase-associated
protein LEO1, putative [Ricinus communis]
Length = 629
Score = 603 bits (1556), Expect = e-170
Identities = 355/637 (55%), Positives = 413/637 (64%), Gaps = 9/637 (1%)
Frame = -1
Query: 2166 MGEEKRHQMMQNLFGDQXXXXXXXXXXXXXXXXXSNRQPDYASXXXXXXXXXXXXXXXXX 1987
MGEEKRHQMMQNLFGDQ N QP+YAS
Sbjct: 1 MGEEKRHQMMQNLFGDQSEDEEEEIDSEHES----NPQPNYASDEAEGGLRNEGEGEDEV 56
Query: 1986 EKQGDAEVESEAELHNLDPDPGESEGERPQSSPEREVNDQH--AXXXXXXXXXXXXXXXX 1813
E +AEV S+ E+ +DPDP ESEGER SS E ++ D+ +
Sbjct: 57 EGNEEAEVVSDVEMREVDPDPRESEGEREASSEEIDIGDEREVSEAKDVDVDSDEKEEYS 116
Query: 1812 XXXXXXXRWNVADSGSERSEENHSVDNEDEEVDQARK-SRSPSEEK-DQAHISHSAAEIR 1639
+ ++ +SGSERSEE+ ++EDEEVDQAR S+SP EK DQ HISHSAAEIR
Sbjct: 117 HRVATGRKRDIIESGSERSEEHQYDNHEDEEVDQARSPSKSPDMEKDDQHHISHSAAEIR 176
Query: 1638 DVFGDSDEEEQEEYATRNDLEQDSHRSPMEEEEGYEKNSRPEDMVPDDDVQYES-EDNIE 1462
DVFG SD+EE+ YATRN++EQ RSPMEEE YE+N RPEDM+ D+D +YES E+NIE
Sbjct: 177 DVFGASDDEEEPVYATRNEIEQHLPRSPMEEEGRYERNLRPEDMLVDEDARYESEEENIE 236
Query: 1461 HKPKEKPVGPPLELEIPLRTPPGRPEKMNMIKVSNIMGIDPKPFDPKTYVEEDMFVTDES 1282
K KEKPVGPPLELEIP + PP P +M+MIK+SNIMGIDP FDPKTYVE+ FVTDES
Sbjct: 237 VKAKEKPVGPPLELEIPFQHPPADPTRMHMIKISNIMGIDPNQFDPKTYVEDKTFVTDES 296
Query: 1281 GSRKRIRLENNIVRWRSTRKPDGTKSYESNARFVRWSDGSLQLLIGNEVLDISVQQAQHD 1102
G KRIRLENNIVRWR R PDG+KS ESNARFVRWSDGSLQLLIGNEVL+ISV++ +HD
Sbjct: 297 GENKRIRLENNIVRWRPVRNPDGSKSVESNARFVRWSDGSLQLLIGNEVLNISVREDRHD 356
Query: 1101 QAHLFLRHGKGILQSQGRLQRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNHVTDND 922
Q HLFLRH K +LQSQGR+ RKM+FMPSSLSSNSH+ LTALVDS ++KVYKVKN VTD D
Sbjct: 357 QTHLFLRHNKSLLQSQGRILRKMKFMPSSLSSNSHKRLTALVDSSYRKVYKVKNCVTDID 416
Query: 921 PEREKEEKERALGQTIKANEILNRKRERVSRKYSHNVDRGRQLSPGFXXXXXXXXXXXDY 742
PEREKEEKERA QTI+AN +LNRKRE+V+RKY+ V+R RQLSPGF DY
Sbjct: 417 PEREKEEKERAESQTIRANVLLNRKREKVNRKYTQTVERRRQLSPGFLEGALDEDDEPDY 476
Query: 741 HEPRRSVARRRFEEDLEVEAHAEKRIINAKRSQVHKDIXXXXXXXXXXXXXXXXXXXXXX 562
++ RRS RRRFEEDLEVEA AE+RI+NAK+ +KDI
Sbjct: 477 YDHRRS--RRRFEEDLEVEARAERRIMNAKKG--NKDILRKPSLPSAKSSKRPVNFSDSE 532
Query: 561 XXXXXXXXXXEV-ERTPPRKRV--XXXXXXXXXXXXXXXEQAGRXXXXXXXXXEPGQRSK 391
E ER+PPRKRV +A EP QRSK
Sbjct: 533 REESEYESDGEEDERSPPRKRVEEPEQEYEEEEEEREAEAEADGASEEEEEAEEPKQRSK 592
Query: 390 DIGSRNKRKEIESDGDSPRRKPIPHRRM-VVYDSDED 283
D G KR IESD +SP RK HRRM VVYDSDE+
Sbjct: 593 DFGGIRKRMGIESDEESPPRKMPTHRRMAVVYDSDEE 629