BLASTX nr result

ID: Coptis23_contig00003859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003859
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277934.1| PREDICTED: GDSL esterase/lipase At5g55050 [V...    87   2e-15
emb|CAN78085.1| hypothetical protein VITISV_034041 [Vitis vinifera]    87   2e-15
ref|XP_002529911.1| zinc finger protein, putative [Ricinus commu...    76   3e-12
gb|AFK33479.1| unknown [Lotus japonicus]                               65   4e-09
ref|XP_002528422.1| zinc finger protein, putative [Ricinus commu...    65   4e-09

>ref|XP_002277934.1| PREDICTED: GDSL esterase/lipase At5g55050 [Vitis vinifera]
           gi|297737455|emb|CBI26656.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/73 (53%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   RKFLVVGIPAVGCCPFQRNQNKTGGGCKEESNYWSNKFNEGAKSMLQAMKTEFKDVNYAF 181
           RKF +VG+ AVGCCP QRN+  T   C EE+NYWS K+NE  KS+LQ + +E K ++Y++
Sbjct: 216 RKFAMVGVGAVGCCPSQRNKKSTEE-CSEEANYWSVKYNERLKSLLQELISELKGMSYSY 274

Query: 182 SDSYNIVLNFIQK 220
            D+Y+++LN IQK
Sbjct: 275 FDTYSVMLNLIQK 287


>emb|CAN78085.1| hypothetical protein VITISV_034041 [Vitis vinifera]
          Length = 364

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/73 (53%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   RKFLVVGIPAVGCCPFQRNQNKTGGGCKEESNYWSNKFNEGAKSMLQAMKTEFKDVNYAF 181
           RKF +VG+ AVGCCP QRN+  T   C EE+NYWS K+NE  KS+LQ + +E K ++Y++
Sbjct: 216 RKFAMVGVGAVGCCPSQRNKKSTEE-CSEEANYWSVKYNERLKSLLQELISELKGMSYSY 274

Query: 182 SDSYNIVLNFIQK 220
            D+Y+++LN IQK
Sbjct: 275 FDTYSVMLNLIQK 287


>ref|XP_002529911.1| zinc finger protein, putative [Ricinus communis]
           gi|223530588|gb|EEF32465.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 363

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   RKFLVVGIPAVGCCPFQRNQNKTGGGCKEESNYWSNKFNEGAKSMLQAMKTEFKDVNYAF 181
           RK+L  G+  VGC P QR +N+    C EE N +S K+NEG K MLQ +K+E +D+NY++
Sbjct: 215 RKYLFPGLGTVGCAPSQRIKNEARE-CNEEVNSFSVKYNEGLKLMLQELKSELQDINYSY 273

Query: 182 SDSYNIVLNFIQK 220
            D+YN++ N IQK
Sbjct: 274 FDTYNVLQNIIQK 286


>gb|AFK33479.1| unknown [Lotus japonicus]
          Length = 361

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = +2

Query: 2   RKFLVVGIPAVGCCPFQRNQNKTGGGCKEESNYWSNKFNEGAKSMLQAMKTEFKDVNYAF 181
           RKF + G+ A+GCCP  R +N T   C  E NYWS K+N+G +SML+  ++E   + Y++
Sbjct: 214 RKFEITGVGALGCCPTFRVKNNTE--CVTEVNYWSVKYNQGLQSMLKEWQSENGGIIYSY 271

Query: 182 SDSYNIVLNFIQ 217
            D+Y ++ + IQ
Sbjct: 272 FDTYTVINDLIQ 283


>ref|XP_002528422.1| zinc finger protein, putative [Ricinus communis]
           gi|223532158|gb|EEF33964.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 356

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +2

Query: 2   RKFLVVGIPAVGCCPFQRNQNKTGGGCKEESNYWSNKFNEGAKSMLQAMKTEFKDVNYAF 181
           RKF ++ +P +GCCPFQR QN T GGC E  N  +  F+   K++L  + +++ D+ Y+F
Sbjct: 212 RKFGIISVPPIGCCPFQRFQNTT-GGCLEGLNDLARDFHSTIKAILIKLSSDYTDMKYSF 270

Query: 182 SDSYNIVLNFI 214
            ++Y + +N I
Sbjct: 271 GNAYEMTINVI 281


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