BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003843
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49379.1| unknown [Medicago truncatula]                          198   1e-48
gb|AFK38569.1| unknown [Medicago truncatula]                          198   1e-48
ref|XP_003608715.1| CWC15-like protein [Medicago truncatula] gi|...   198   1e-48
ref|NP_001149090.1| LOC100282711 [Zea mays] gi|195613170|gb|ACG2...   194   2e-47
gb|ACJ85892.1| unknown [Medicago truncatula]                          181   1e-43

>gb|AFK49379.1| unknown [Medicago truncatula]
          Length = 227

 Score =  198 bits (504), Expect = 1e-48
 Identities = 114/228 (50%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
 Frame = -2

Query: 714 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 541
           MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN  
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60

Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 361
                                       HL LEG KRD ED I PR              
Sbjct: 61  DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNGD 120

Query: 360 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 181
                                                           L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180

Query: 180 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 37
           S   VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227


>gb|AFK38569.1| unknown [Medicago truncatula]
          Length = 227

 Score =  198 bits (504), Expect = 1e-48
 Identities = 114/228 (50%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
 Frame = -2

Query: 714 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 541
           MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN  
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60

Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 361
                                       HL LEG KRD ED I PR              
Sbjct: 61  DKLDERERRHFPSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 120

Query: 360 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 181
                                                           L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180

Query: 180 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 37
           S   VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227


>ref|XP_003608715.1| CWC15-like protein [Medicago truncatula]
           gi|355509770|gb|AES90912.1| CWC15-like protein [Medicago
           truncatula] gi|388502986|gb|AFK39559.1| unknown
           [Medicago truncatula]
          Length = 227

 Score =  198 bits (504), Expect = 1e-48
 Identities = 114/228 (50%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
 Frame = -2

Query: 714 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 541
           MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN  
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60

Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 361
                                       HL LEG KRD ED I PR              
Sbjct: 61  DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 120

Query: 360 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 181
                                                           L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180

Query: 180 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 37
           S   VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK 227


>ref|NP_001149090.1| LOC100282711 [Zea mays] gi|195613170|gb|ACG28415.1|
           pre-mRNA-splicing factor cwc15 [Zea mays]
           gi|195624656|gb|ACG34158.1| pre-mRNA-splicing factor
           cwc15 [Zea mays] gi|223973401|gb|ACN30888.1| unknown
           [Zea mays] gi|223973659|gb|ACN31017.1| unknown [Zea
           mays] gi|414875696|tpg|DAA52827.1| TPA:
           pre-mRNA-splicing factor cwc15 [Zea mays]
          Length = 230

 Score =  194 bits (494), Expect = 2e-47
 Identities = 111/230 (48%), Positives = 126/230 (54%), Gaps = 4/230 (1%)
 Frame = -2

Query: 714 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRNXX 535
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRD+A+HT+LKPRK+GQ TQ+E+QKRN  
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDLAAHTSLKPRKDGQQTQEELQKRNLR 60

Query: 534 XXXXXXXXXXXXXXXXXXXXXXXXXS---HLLLEGAKRDTEDRIFPRPXXXXXXXXXXXX 364
                                        HLLLEG+KR+TED+I PR             
Sbjct: 61  EELEERERKHYSSKDKSYAEERDRRKSSSHLLLEGSKRETEDKIVPREIDADDSDVEPKS 120

Query: 363 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLN-N 187
                                                            L+RGNPL+N N
Sbjct: 121 DDESDEDDDDDDTEALMAELERIKKERAEEKLRKERQQAEEEAKMKEAELMRGNPLININ 180

Query: 186 NTSAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRKFLHKYMK 37
           N  +  VK+RWD+DVVFKNQ RGETK  KRFINDTIRSDFHRKFL +YMK
Sbjct: 181 NAGSFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLQRYMK 230


>gb|ACJ85892.1| unknown [Medicago truncatula]
          Length = 250

 Score =  181 bits (460), Expect = 1e-43
 Identities = 106/221 (47%), Positives = 117/221 (52%), Gaps = 2/221 (0%)
 Frame = -2

Query: 714 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDIASHTTLKPRKEGQDTQDEVQKRN-- 541
           MTTAARPTWAPAKGGNEQGGTRIFGPSQK+SSRDIASHTTLKPRK+GQDTQDE+++RN  
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60

Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXXXSHLLLEGAKRDTEDRIFPRPXXXXXXXXXXXXX 361
                                       HL LEG KRD ED I PR              
Sbjct: 61  DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 120

Query: 360 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRGNPLLNNNT 181
                                                           L+RGNPL+NN T
Sbjct: 121 DESDDDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGNPLINNPT 180

Query: 180 SAHIVKKRWDEDVVFKNQTRGETKATKRFINDTIRSDFHRK 58
           S   VK+RWD+DVVFKNQ RGETK  KRFINDTIR+DFHR+
Sbjct: 181 S-FSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRE 220